Cyprinus carpio (common carp): 109092914
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Entry
109092914 CDS
T05134
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109092914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109092914
Spliceosome [BR:
ccar03041
]
Complex A
Other components
Complex A specific factors
109092914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
109092914
NCBI-ProteinID:
XP_042615705
Ensembl:
ENSCCRG00000009422
UniProt:
A0A8C2HU34
LinkDB
All DBs
Position
A7:13662692..13672211
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AA seq
663 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFESGPGAGLMAPPGPAVSFPMQSLQQPQLSNPGFSQFP
GAVSSALSNPVGVGLQSQAGSGDFGQKKRKRSRWSSETPDQKTVIPGMPTVIPAGLTRDQ
ERAYIVQLQIEDLTRKLRTGDLGIPVIPEDRSPSPEPIYNSEGKRLNTREYRTRKKIEEE
RHSLITEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIE
KECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQ
GIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSITNTTVCTKCGGAGHI
SSDCKFTSSFAQRPGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSNPPPSGPRP
SGPNNNQPPPNRPPWMNSGPTDNRNYHGMHQGPGGPHNFPPPMPNMGGPPMPPNPNGMPP
PWMQPPPPPMSQGPAPPGHPMGLLPPPMGMMPPPPPPPNNQPPPPPSGPLPPWQQQAPPP
PPTSSMATSAPLPWQQNTTTTSTPATGNLPPWQQPQQTAVSAAQPPPPMGNPSMVPPPPG
VQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPNYVTMMGIPGMPPYGMPPAPPPPP
PQS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagccaacgcaaccccgctggggaagctgcacccgagtatcggcgctaag
cgaggctttgagtctggccccggcgcggggttaatggcaccgcccgggcctgcggtgtct
ttcccgatgcagagcttacagcagccgcagttatcaaacccaggcttctcgcagttcccc
ggagccgtgagttctgcgctctcgaacccagtcggagtgggactgcagtctcaggcgggg
agtggagattttggccagaagaagcgaaaaaggagtcgctggagcagcgaaactcctgat
cagaagaccgttatcccgggcatgcccaccgtgatccctgctgggctgactcgggaccag
gaacgagcttatatagtccaactgcagatcgaagacctgacacgtaaactgcgtacagga
gacctgggaatccctgttatccctgaggacaggtctccatctcctgagcccatctacaac
agtgaggggaaaaggcttaacacgcgtgaatatcggacgcgcaagaaaatagaggaagag
agacattctcttattacagagatggtaggactgaaccctgaattcaaaccccctgctgac
tacaaaccaccagctactcgggtcagtgataaggtgatgattcctcaggatgaatatccc
gagatcaactttgttgggcttttgattggcccacgtggaaacactctgaaaaacattgag
aaggagtgctgtgctaagatcatgattcgtggtaaaggctcagtaaaggaaggaaaggtg
ggccgtaaggatggacagatgcttccaggagaagatgaacctcttcatgcactggtcact
gctaacactatggagaacgtcaagaaagctgtagagcagattcgtaatatcctcaagcag
ggcattgagacccctgaagaccagaatgatctgagaaagatgcagctgagggagctggca
cgactcaatggcactctgagagaggatgataacagaatcttacgcccatggcagagcaca
gagcctcgcagcatcacaaacacaactgtctgtacaaagtgtggtggagcaggtcacatc
tcatcagactgcaagtttaccagttcctttgcacaacgacccggtgaaccaccccagtct
gctcaggataaggcccgaatggataaagagtacttgtctctcatggcagagctaggagag
gctccagtcccttcctccggtgggggccacagcaatcctccccctagtggacctcgtcct
tcaggacccaacaacaaccagccgccaccaaatcgtcctccttggatgaattcaggccct
actgataataggaattaccatggcatgcaccagggtcctggtggccctcacaacttccct
ccaccaatgccaaacatgggcggccctcctatgccaccaaaccccaatggaatgcctcca
ccctggatgcagccgccacctcctccaatgagccaaggcccagcaccacccggacacccc
atgggtttattgccgccacccatgggtatgatgcccccacctccacctccccccaacaac
caaccaccacctccaccctcaggacctctgccaccatggcaacagcaggcccctccccca
ccacccaccagcagcatggcaaccagcgctccactgccttggcaacaaaatacaaccacc
acatccacccctgcaacaggaaacctgccaccctggcaacagcctcagcagacggccgtc
tcagctgctcagccccctccacccatgggcaacccctctatggtgccgcctcctcctggg
gtccaacccccactacctcctggggcgccccctcctccaccaccccctccacctggctcg
gcaggcatgatgtacgcgcctcctcccccacccccacccatggaccctaactatgtgacc
atgatggggattcccggtatgccaccttacgggatgccccctgcgcctccaccgcctccg
ccccagagttaa
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