Cyprinus carpio (common carp): 109093019
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Entry
109093019 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 5-like
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccar01002
]
109093019
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109093019
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109093019
Enzymes [BR:
ccar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109093019
Peptidases and inhibitors [BR:
ccar01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109093019
Ubiquitin system [BR:
ccar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109093019
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109093019
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
109093019
NCBI-ProteinID:
XP_018962291
LinkDB
All DBs
Position
13:complement(4359458..4368866)
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AA seq
852 aa
AA seq
DB search
MTEVNEILMSVLSTIRVPRPGDRVHKDECAFSFASPESDGGLYVCMNSFLGFGSKYVERH
HVKTGQRAYMHITRTRKTQEDDNNSGSGDPPKKKPTRLAIGIEGGFDVEQEQYEEEVKVV
LFPDRQEVTSEDLASMPDVVRERVSLSMAGLLAADSVSHTLQVQQWDGEVRQESKHAAEL
KQLDNGIKIPPCGWKCEVCDLQENLWMNLTDGKVLCGRRYFDGSGGNNHALLHYQQTGYP
LAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLSHLALIXXLVEKTERTMTELEIAVNQR
VGEWEVIQESGTTLRPLWGPGLTGMKNLGNSCYLNSVMQVLFTIPDFQTKYVSNIDKVFN
EAPSDPTQDFKTQVAKLGYGLLSGEYSKPAPDPGDDPSSSTEPRGDQVGIAPRMFKALVG
RGHPEFSTNRQQDAQEFLLHFINMVERNCRSGMNPSEAFRFLVEEKIVCQQSQKAKYTQR
VDYIVQLPVPMDQATNMEELQEAERRREEAESSGAPPSAAPRAQIPFAACLAALSEPETL
TDFWSSAVQAKTTATKTTRFASFPDHLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDLSAL
RAMGQQPGEELLPEVAPLPLVTPDVEVKGILGSHGNEEDDSLYSPLLSPVLDDSTVSQLC
EMGFPLEACRKAVYYTGNTGIDAAMNWVMGHMEDPDFSAPLVLPGSSSAPGTTPTESLPE
EHLVTIVSMGFSRDQATRALRATNNVLERAVDWIFSHLDDLESMDVSEGGRSEGGSEASR
EPPPGPRVRDGTGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPKD
LGYLYFYRRVVE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggttaacgagatattgatgtcggttctgtctacgattcgggttccgaggccc
ggagatcgtgttcacaaagacgagtgcgccttctcattcgccagtccggagagtgacgga
ggcttgtatgtctgcatgaacagctttctcggctttggaagcaagtatgtagaaagacac
cacgtcaaaaccggtcagagagcttacatgcacatcacccggacccggaaaacacaggag
gatgataacaattctggatcaggtgaccctccaaaaaagaagcccacaagactagccatt
gggattgagggtgggtttgatgttgagcaggagcagtatgaggaggaggtcaaggtggtt
ctgttcccagaccgacaggaagtgacatcagaggatctagcctccatgccagatgttgtt
cgggaacgggtgtctctgtcgatggcggggctgctggcagcagactcagtgtcgcacact
ttgcaggtgcagcagtgggacggagaagtgcgacaggagtcaaaacacgcagctgaactt
aaacaactcgacaatgggatcaaaatccctccttgtggttggaagtgtgaggtctgtgac
ctacaggaaaacctgtggatgaatctgacggatgggaaggttttgtgtgggcggagatat
tttgatggctcaggggggaataaccacgccctcctgcactaccagcagactggataccca
ctggctgtcaaactcggcacaataacacctgacggagcagatgtctattcatatgatgaa
gatgatatggtattagattctaagcttccagaacacctttctcacttggcattgatatga
tgactagtggaaaagacggaaagaaccatgactgagctggagatcgcagtgaaccagcgt
gtgggagagtgggaggtgattcaggagtcaggtaccacactgagacccctatggggcccg
gggctcactggaatgaagaacctgggaaacagctgctacctcaactctgtcatgcaagtg
ctcttcaccatcccagacttccagaccaaatacgtttccaacatcgacaaggtctttaat
gaggcgcccagtgaccctacccaggattttaagactcaagtagcaaagctgggctatggc
cttctgtcaggagagtactctaagccggcccctgaccccggggatgaccccagctcctcc
actgaacccaggggtgatcaggttggcatagcccctcgcatgttcaaagctctggttgga
cgaggccaccctgagttctctaccaatcggcagcaggatgcgcaggagtttcttcttcac
tttataaatatggtggagaggaactgtcggtctggcatgaatccctcagaagctttccgc
ttcttagtggaggagaagattgtatgccagcagtcacaaaaggccaaatatacccaacga
gtggactacatagtccagctgcccgttcccatggaccaggcaactaatatggaggagcta
caagaagcagaacgtcgccgggaggaggcggagtcatctggagcccctccctctgctgca
ccacgtgctcaaattccattcgctgcctgtttggctgctcttagtgaaccggaaacactc
acagatttctggagctctgcagtgcaagccaaaaccactgccacaaagaccactcgcttt
gcttcatttcctgaccatcttgtcatccaaattaagaaattcaccttcggcctggattgg
gttcctaaaaaattagatgtgagcattgatgttcctgacacactggatctgagcgcgctc
cgtgctatgggacagcagccaggggaggagcttctgccagaggtggctccacttcctctc
gtgacccctgatgtggaggttaaaggtatcctgggttcccacggcaacgaggaggacgac
tctctctactccccactgctgtctccggtgctggatgactctacagtgtctcagctgtgt
gagatgggctttcctctggaggcctgccggaaggctgtgtactacacaggcaatactggc
atcgacgctgctatgaactgggtgatgggacacatggaagaccctgatttctccgcacct
ttagtgttgcctggatctagttctgctcctggcaccacacccacagagagtctacctgag
gaacacctagtaaccatcgtttctatgggattcagtcgagaccaggccactcgtgctctc
agagctacgaataatgttctagagcgagctgtggactggatcttctctcatctggatgat
ctggagtccatggatgtgtctgagggtggacgctcagaaggaggaagtgaagccagtcgg
gaacctcctccaggaccgcgtgtccgtgatggaacaggaaagtatgagctttttgcgttc
atcagtcacatgggaacgagcacaatgtgtggtcattatgtctgccacatcaagaaagac
caacagtgggtaatctttaacgatcagaaagtgtgtgcctctgagaaacctcctaaggac
ctgggctacctgtacttttacagaagagtagtggaatag
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