Cyprinus carpio (common carp): 109093104
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Entry
109093104 CDS
T05134
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109093104 (rfc1)
03410 Base excision repair
109093104 (rfc1)
03420 Nucleotide excision repair
109093104 (rfc1)
03430 Mismatch repair
109093104 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccar03032
]
109093104 (rfc1)
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109093104 (rfc1)
DNA replication proteins [BR:
ccar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109093104 (rfc1)
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109093104 (rfc1)
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NCBI-GeneID:
109093104
NCBI-ProteinID:
XP_042570912
Ensembl:
ENSCCRG00000051363
UniProt:
A0A9Q9VTI7
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Position
A1:complement(1834481..1848728)
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AA seq
1139 aa
AA seq
DB search
MDIRRFFAPSKPAAPKPSNTSSTDEEQKKKPKSKTKVKSPRSDEKPSGKRKKRVIIDSDS
EEEKKEKKKTKKSAKETDAPTAKKHPVTYVSDSDSDDTFMTLKKTRRKENGTAEGKKESG
PGKAKQVSSSKSPTKSPNALSKGAAKSSQPTVSSKVAAPTPPKHMPISVADFFGSSSVQR
SEKRMVASTSTKRKAPSQDTEESLSDEAIAKQLQMDEDMELEKKIHDDEEFARTLAMLDE
APSPKKARVDSVSPSKSRASASDTKPRKDPSPKQSPVKTSSKLAQMKRRQEEEEEQRKKD
RGEKQIKISPKKEPISPATSERVATPKTASVSTGATKSRNVSTPKTDGAPKTSPTKPENK
SPEDLEKKRANSSAYRNYLNREGPRALGSKEIPQGEENCLEGCVFVLTGVLESLERDDAK
SLIERYGGKVTGNVSRKTTYLVLGRDSGASKSEKAESFGTKIINEDELLDLIRTKPGKKS
KYEIAAEAENKSFKARTPDSRDKRTPSKKATPQGPSPNKRSPSKGKSKPGSASKSGTLGA
SRSEVKKSLSFDQTKRASPVSHSTPENDGSSLLWVDKYRPRSLKNLIGQQGDQSCANKLL
RWLQNWHKHHSGITKAPAAKFGKFGSKDDGSGFKAALLSGPPGVGKTTTAALVCEELGYS
YVEMNASCTRSKNSLKEVIAESLNNTSIKNFYTGASQTVSSKHVLIMDEVDGMAGNEDRG
GIQEMIGLIKQSKIPIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAVMSIAFKEG
LKIPPPALNEVILASNQDIRQVLHNLSMWAAKDKVMTYDQAKADANSARKDMKLGPFDVC
RKVFASGEESAHMTLIDKSDLFFHDYSLAPLFVQENYLHVRPAAAGGNLKNHLVLLSKTA
DSICDGNLVDKQIRSRQAWSLLPTQAIYASVLPGELMRGYMSQFPTFPSWLGKFSSAGKH
SRIIQELASHMSLKTLSSKEAINLDYLPYLRSAVLEPLQSQGSEGAGQSVQLMDDYDLIK
EDVDNMMEISTWGGQPDPYSKLDSKVKAAFTRAYNKESHLTPYSLQVVKKSRKGAVDPEL
IGELDGESQLQEEEEDNGVTSDAMIKQKKAKPAKDIKQEKPGASGKGKGRGKGKGKVVN
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggacatccggaggttttttgcacctagcaaacctgcggcacccaaaccttcaaataca
agcagcactgatgaagagcagaagaagaaaccgaaatcaaaaactaaggtcaaaagcccc
agatctgatgaaaaaccctctggaaagcgaaagaaaagagtcataattgattcagactct
gaggaagagaaaaaggagaagaagaagaccaaaaagagcgctaaagagactgacgcccct
acagcgaagaaacacccggtaacttacgtgtctgattctgattcggatgatacatttatg
actctgaaaaagaccagacgaaaagaaaatggaactgctgaaggcaagaaagaatcaggt
ccgggaaaagcaaaacaagtctcttccagtaaatccccgaccaaatccccaaacgcactc
tcaaagggagcggcgaagagctctcagcccaccgtctcctcaaaggtggcggcaccaacc
ccaccgaaacacatgcccatctcagtagcagacttctttgggagctcaagtgttcagagg
tcagagaagagaatggtggccagtaccagcactaagaggaaggcaccctcgcaggacact
gaagagtcgctcagtgatgaagccattgctaaacaacttcagatggatgaagacatggag
ttggaaaagaagatccatgatgatgaggaatttgcaagaacattagccatgctggatgaa
gctccctcaccgaaaaaggctcgagtggactctgtctctccatccaagagcagagcaagt
gcctcagacaccaaacccagaaaggacccgtcccctaaacaaagtcccgtgaagaccagc
tccaaactggctcagatgaaaaggcgacaggaagaagaggaagagcaaaggaagaaagac
aggggtgaaaaacaaattaagatctctcctaagaaagagcccatctctccagctacctca
gagcgagtagctacgcccaaaacagcaagcgtttccacaggagcgacgaaatcaaggaat
gtttccacacctaaaactgacggtgcacctaaaacctcaccaacaaaaccagagaataaa
agtcctgaggacttagagaaaaaacgggcaaattcgtcagcctaccgtaactatttgaac
agagaaggaccacgagcactggggtctaaagagatcccgcagggagaagagaactgtctg
gagggttgtgtgtttgtgttgaccggtgtgttagagtctctcgagagggatgatgctaag
tcactaatagagcgatatggcgggaaagtcacgggaaacgtcagccgtaaaaccacttac
ctcgttctgggacgagacagcggggcctcgaagtctgagaaggcggagagttttggtact
aagatcataaacgaagatgagttgttggacctcataagaaccaaaccaggcaagaagtct
aaatacgagatcgcggcagaggcagagaataaatcgtttaaagcaaggactccagactct
agagacaaacgcactccgtccaagaaggccactccacaagggcccagccccaacaagaga
agcccttcaaaggggaagtctaagcctggctcggcttctaaatctggaacacttggcgcc
tctcgttcagaggtcaaaaagagtttgagctttgatcaaaccaagagagcatcccctgta
tcgcactctacccctgagaatgatgggagcagcctgttgtgggtggataagtaccgccct
cgtagtctgaagaacctgatcggccagcagggggatcagagttgtgctaacaagcttcta
cgttggttacagaactggcataaacatcacagcggcattacaaaagcaccagcagccaaa
ttcggtaagtttgggagtaaagatgacggttctggatttaaggccgcattgttgtctggg
cctcctggtgttgggaagaccactactgctgccctcgtctgtgaggagttgggttacagc
tacgtggagatgaatgcgagctgcacccgcagtaagaacagcttaaaggaagtgatcgca
gagtcactcaacaacaccagcattaagaacttctataccggtgcatctcagacggtgagc
agtaaacatgtcctcataatggacgaggtggacgggatggcaggaaatgaagacagagga
ggaatacaggagatgattggtctgataaaacagtcaaagattcccatcatctgcatgtgc
aatgaccgtaatcatcagaagatccgctcgctggccaactactgctacgacctgaggttt
cagagaccccgcgttgagcagatcaagggggctgtgatgtctatagctttcaaagagggt
ctgaaaatcccacccccggcacttaatgaagtcatcctggcgtccaatcaggatattcgg
caggtactgcataatctaagcatgtgggcagctaaagacaaagtcatgacttacgaccag
gccaaagctgacgctaacagtgctaggaaggacatgaaactgggtccctttgatgtgtgt
cggaaggtgtttgcttcaggagaggaaagcgcgcacatgactttgattgacaaatcagac
cttttcttccatgattactctttagcaccactatttgttcaggaaaactacctgcatgtc
cgaccagccgctgcagggggaaatctgaagaatcatctggtgctgttgagtaaaacggca
gacagtatttgcgatggaaatttagtggacaaacagatccgctccagacaggcatggtct
ctgctccccacacaggcgatttatgcgagcgtgttgccgggggaactgatgcggggttat
atgagtcagtttccgacctttcccagctggttgggcaagttctcatcagctggcaaacac
agccgcatcatacaggagctcgcttcacacatgagcctaaagacgttaagcagcaaggaa
gcaataaatctggattacctgccgtatttgcgctcagcagtgttagagcctcttcagtcg
cagggttcggagggagccggtcagagcgtgcagctcatggatgattatgaccttatcaaa
gaggatgttgataacatgatggagatcagcacttggggcggacagccggatccttactct
aaactggactccaaggtgaaagctgcgtttacaagagcctacaataaggaatcgcatctt
acgccgtactctttacaagtggttaagaaaagccgtaaaggcgctgttgaccctgagctc
ataggagagcttgacggtgaatctcagctccaggaagaggaagaagataatggcgttact
tcagatgcaatgataaagcagaaaaaagccaaaccagcaaaagacatcaagcaagagaaa
ccaggggcttctgggaaggggaagggcaggggtaaaggaaagggaaaagtagtgaactga
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