Cyprinus carpio (common carp): 109093208
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Entry
109093208 CDS
T05134
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109093208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109093208
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109093208
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
109093208
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
109093208
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
EnP1_C
TPR_Vitellogenin
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
109093208
NCBI-ProteinID:
XP_042571665
Ensembl:
ENSCCRG00000000702
LinkDB
All DBs
Position
A1:complement(1888656..1915200)
Genome browser
AA seq
1402 aa
AA seq
DB search
MELPQQPQQQRPAADGKIIYPLGVKEITDKISNDEVVKRLKLVVKTYMDMDQDSEEEKQQ
YLALALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLK
GLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQM
HMLDLMSSIIMEGDGVTQELLDTILINLIPAHKNLNKQAYDLAKTLLKRTVQTIETCIAS
FFNQVLVMGKSSVSDLSEHVFDLIQELFAIDPLLLFSVMPQLEFKLKSNDGEERLAVVKL
LAKLFGAKDSELATQNRPLWQCFLGRFNDIHVPVRLECVKFASHCLMNHPDLAKDLTEFL
KVRSHDPEEAIRHDVIVTIINAGKKDLNLVNDQLLGLFIKKMIQKKWRVRKEAMMGLAQL
YKKYCLHHEAGKESALKISWIKDKLLHIYYQNSIDDKLLVEKIFAQNMVPHSLETEEKMK
CLYYLYACLDTNAVKALNEMWKCQNMLRGLVRELLDLHKLPTSEANTSAMFGKLMTIAKN
LPDPGKAQDFMKKFNQVLGEDEKLRLQLEQLISPTCSCKQAEQCVREITRKLTFPKQPTN
PFLEMVKFLLERIAPVHIDSEAISALVKLLNKSIEGTADDDDEGVTPDTAIRAGLELLKV
LSFTHPTAFHSAETYESLLQCLKMEDDKVAEAAIQIFRNTGQKIETDLPQIRSTLIPILH
QKAKRGTPHQAKQAVHCIHAIFHNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLGHISM
LAPDQFASPMKSIVANFIVKDLLMNDRSVGNKNGRLWTADDEVSPEVLAKVQAIKLLVRW
LLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKKISKSDMSRLRLAAGSAIMKLAQEPCY
HEIITPEQFQLCGLVINDECYQVRQIFAQKLHVALVKLFLPLEYMAVFALCAKDPVKERR
AHARQCLLKNISVRREYIKQNPMAHEKLLSLLPEYVVPYMIHLLAHDPDLTKPQDLEQLR
DVKECLWFMLEVLMTKNENNSHSFLRKMVENMKQTKDAQSPDDPKANEKLYIVCDVALFV
IANKSTSCHLDSPKDPVLPCKFFTPPDKDFINDKEYLSPEAKLVLQTGKIQQPPKQTGVL
GAVNKPLTVTVTARRPYIKTTASDTGSNASTNSQPISPATNKSRDVSSEASETEARENEE
NPVITKAGGVKKEEAAQPSGKKRAAPASDGTENSVSSNPSAGSQPPANKPRRGRPPKNAA
GVATPDKEAGATTGAGTGRGRKRAAPAQDPASTASADPVGVKTPKQQKEAEPKRVTPQRQ
IDLQRSVRVAQQASQKTYGSEGETEREVESSPEYVLQEQQEEALDRWLRGAAGPKQRECT
HAAEQGEPSVKRRCVKTRTVRQ
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggagctcccgcagcagccgcagcagcagagaccggcggcggacgggaagatcatctac
ccgctgggcgtcaaagagatcacggataaaatcagcaacgatgaagtcgtcaaacgactc
aagctggtggttaagacgtatatggacatggatcaagactcagaggaggaaaagcagcag
tatttggctctggctcttcacttggcatctgagtttttcctgcgaaaccccaacaaagat
gtacgattacttgtggcctgctgtcttgctgatatcttcaggatctacgctccagaagcc
ccatacacctcgcatgacaagctcaaggaaatttttctcttcattacgcgacagttgaag
ggattagaagataccaagagccctcagttcaacagatatttttacttactagagaacctg
gcatgggtgaagtcctacaacatctgttttgaattggaggactgtaatgagatcttcatc
cagctcttcaaaaccctcttttccgtcatcaataacagccataatcagaaggtgcagatg
cacatgttggacctgatgagctccatcatcatggagggagatggagtgacgcaggagctg
ctggacacaatcctcatcaacctcatccctgctcacaaaaatttgaataagcaggcgtat
gacctggccaagactcttctgaagagaacggtgcagaccatcgaaacctgcattgcctca
ttctttaatcaggtgttggtgatggggaagtcctccgtgagcgatctgtctgagcatgta
tttgacctcattcaggagctctttgcaatcgaccctctgcttctcttctctgtgatgcca
caacttgagtttaaattgaagagcaatgatggagaggagaggttggctgtggtgaaactg
ttagctaagctctttggagcaaaggactctgagctggccactcagaatcgtccactctgg
cagtgctttctgggaaggttcaatgacatccatgttcctgtgagactggaatgtgtgaag
tttgctagccactgtctgatgaaccacccggaccttgccaaggatcttacagagtttctg
aaggtgagatcacatgacccagaggaggcgatcagacatgatgtcattgtgaccatcatc
aacgcagggaagaaagacctgaacctggtgaatgatcaactgttgggattattcataaaa
aagatgattcaaaaaaaatggcgtgtgcgtaaggaagcaatgatgggtttggctcagctt
tataagaagtactgtctgcaccatgaggccgggaaggagtccgctttgaaaatcagctgg
atcaaagacaaactcttacacatctactaccagaacagcatagatgacaagttgctggtg
gagaagatctttgcccagaacatggttcctcacagtctggagactgaggagaagatgaag
tgtctgtactacctttatgcctgtctggacactaacgcagtcaaagcattgaatgaaatg
tggaagtgtcagaatatgctgagagggctggttcgagaactgctggatttacacaaattg
cctacatctgaagcaaacaccagcgccatgtttggaaaacttatgaccatcgctaagaat
ctcccagacccaggtaaagctcaggactttatgaagaagtttaatcaggttctgggtgag
gatgagaaactccgtcttcagcttgagcaactcatcagtcccacctgctcatgtaaacag
gctgaacagtgtgtgagggaaatcacacggaagctgacattccccaagcaacccacaaac
ccattcctggagatggtgaaattcttgctggagagaatcgcaccggtgcacattgactct
gaggccatcagtgccctggttaagctgttaaataagtcaatcgagggcactgctgatgat
gatgatgagggagtaacccctgatactgccattcgtgctggacttgagctactcaaggtt
ttgtcgtttactcaccccactgcgttccactcggctgagacgtacgagtctttgttgcag
tgtctgaagatggaggatgataaagtggcagaagcggcgatacagatcttcagaaacacc
ggacaaaagatcgagacagatctgccacaaatccgctcgactctaattcccatactacac
cagaaggcgaaacgaggaacgcctcaccaggccaaacaggcggtccactgcatccatgcc
atctttcacaacaaagaggtccagttagctcaaatatttgagccgttgtctcgcagtctg
aatgcagacgtgcctgaacagctcatcactcctctcgtgtctctcggacacatttcaatg
ctagccccggatcaatttgcatcacccatgaagtcaattgtagccaattttatcgtgaaa
gaccttctgatgaacgacagatctgtgggaaacaagaatggacggctctggaccgctgac
gatgaggtttcgcctgaagtgctggctaaggtgcaagccattaagctgttggtccgctgg
ttgctgggaatgaagaataatcagtctaaatcagcgaactctactctcagactcctctca
gccatgctggtcagcgagggagacctcacggagcagaaaaagatcagcaagtctgacatg
tctcgactgaggcttgcagcgggaagcgccatcatgaaactggcacaagagccctgttac
cacgaaatcatcactccagaacagttccagctctgtggactcgtcattaacgacgagtgc
tatcaggtgcggcagatctttgctcagaagttgcatgttgctctggtgaagctgtttttg
ccgctggagtacatggctgtgtttgcattgtgcgctaaagaccctgtgaaagagcgacgt
gctcatgcccgacagtgcctgctcaagaacatcagtgttcgcagagagtacatcaaacag
aaccctatggcccatgaaaagctgctgtctctcctgccagaatatgtggtgccatacatg
atccatcttctggctcatgatccggacctcaccaaaccacaggatttggagcagctccga
gacgtcaaggagtgcttgtggttcatgctggaggtgttgatgacaaagaatgagaataac
agtcactcgttcctgaggaagatggtagagaacatgaaacaaacaaaagatgctcagtcc
ccagacgacccaaaggcaaacgagaaactttacattgtgtgcgatgtggcattatttgtg
atcgcgaacaagagcacttcgtgtcatctggactccccgaaagatcctgtgctgccctgc
aagttctttactccacctgataaggattttatcaatgataaggaatatctgtcaccagaa
gctaagttagttctgcagacagggaaaatccagcaaccaccaaagcagacaggcgtgctg
ggggcagtgaacaaacctttaacggtgacggtaaccgctcgccgaccgtacattaaaacc
accgcctctgacacgggaagcaacgcgagcaccaactcccaacccatctcgcccgcaacg
aataagagcagggatgtgagttctgaggcctcggagacggaggcgagggagaacgaagag
aatccagtcatcacaaaagcaggaggtgtaaagaaggaggaagcagctcagcccagtggg
aagaagcgtgctgctcctgcaagtgacggcacagagaacagcgtgtcctcaaacccctcg
gcagggtcacagccccctgccaataaacccagacgcggtcgacccccgaaaaacgctgca
ggtgtagccacaccggataaagaggctggagcgacgacgggagcagggaccggacggggc
cggaagagagcagcacctgctcaggatcccgccagcacagcctcagctgatccagtcggt
gtcaagacaccaaaacagcagaaagaagcagaacccaagagagtcacaccacagagacag
attgacctgcaaagatcagtgagggtagctcagcaagcgtctcagaagacatatggaagc
gaaggggagacagagagagaagtggagtccagcccagagtatgtactacaggagcagcag
gaagaagcccttgacaggtggctcaggggtgcagcaggtcccaaacagagagaatgcacc
catgcagcagagcagggcgagccgtcagtaaagcgtcggtgcgtgaagacaaggacggtc
aggcagtaa
DBGET
integrated database retrieval system
