Entry |
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Name |
(RefSeq) ribonuclease ZC3H12A-like
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KO |
K18668 | ribonuclease ZC3H12 [EC:3.1.-.-] |
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Organism |
ccar Cyprinus carpio (common carp)
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Brite |
KEGG Orthology (KO) [BR:ccar00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ccar03019]
109093325
Messenger RNA biogenesis [BR:ccar03019]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109093325
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
A19:9625362..9633889
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AA seq |
721 aa
MVKPEGPRDVSTRLTSWYCVSKIKVCRFSLRYFAALASTGTKLTYLLTFFLQEDSSSKHK
ENRSSKGVTDKDVFPEEEMSAEISTIPTLHLYLDSFWSSSVGTHSSDVNTNNAWVTAPTS
LYNPPVSSTFRMDPAQSSPTPDESPELSSEFQAQLDLFLKLGFSQTQVRAAFLKLGLNAD
TNKVLGELIQAAGESEEREEPTASPVLVSRGDASSKVRNTQNHCHNAPAVSSTSEELVED
EDALRPIVIDGSNVAMSHGNKEVFSCLGIQLAVNFFLERGHVDITVFVPSWRKEQPRPDV
PITDQHILRELERRKLLVFTPSRRVAGKRVVCYDDRFIVKLAYESDGIIVSNDTYRDLQG
ERPEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPTLDNFLRKTPRIPKKQPCPYGKKCT
YGIKCKFHHPERTKQSQRALADELRDKAKISSTLHKPQPGPSQSPSPEEVMEQKLSLDAG
SLKKSHASENVLVIKAAPQPTQRKLPLKKERRHSPTSLDSFPNGSQERLDSGLGSYECHS
PETSHCDRYSDHRKSKPPNSGRHRYVLANSQPCSCCSYQSLSTSGAGQHHSMGLPSSPNP
SYAQPQYHSYGGGPVYPPVNMSQYSFPQSRGPSPQQGYWSDRYGGYPPASHNSIQPERGH
GHWSPSNHSPQWSEREQVRKKLLAIFNARLVDRAMDRFPYLLDPQRLAAEILTLQSQDGV
F |
NT seq |
2166 nt +upstreamnt +downstreamnt
atggtaaaacccgaaggcccccgtgacgtcagcacacgacttacttcctggtactgtgtt
tctaagataaaggtgtgtcgattctctctccggtattttgctgctttggcttcaaccgga
acgaaacttacgtacttattaactttttttttacaagaagacagcagctcgaaacacaaa
gagaacagatcaagtaaaggagtgactgacaaggacgtttttccagaagaagagatgagt
gctgaaatcagcaccatccccacgttacacttgtatttggattccttttggtcatccagt
gtaggaacccacagctctgacgtaaacaccaacaacgcatgggtaacagcacccacatct
ttgtacaacccacccgtttccagcacctttagaatggacccggcccagtccagcccgact
ccagatgaatcccccgaactaagttccgagtttcaggcccagctcgacctgttcctcaag
ctggggttttcccaaacgcaggtccgtgctgcttttctgaaactcggcctcaacgcagac
accaacaaggttttgggtgagctgatacaggctgctggggaatcagaagagagagaggaa
cccacagcctccccggtgctggtttcacgtggggatgcttcctctaaggtccgaaatacc
cagaatcactgtcataatgctccggcagtttcaagcacttcagaagagctggtagaggat
gaggacgcactcagaccaatagttattgatggatctaacgtagccatgagccacgggaac
aaggaagttttttcctgtctgggaattcagttggcggtgaacttcttcctggagcggggt
cacgttgacatcacagtgtttgtgccttcttggagaaaagaacagccgcgacctgatgtg
cccattacagatcagcacattctgcgtgagttggagcggaggaagctcttggtgttcaca
ccatccagaagagtggcaggaaaacgtgtggtttgctacgatgaccgttttattgtgaag
ctggcgtatgaatctgacggcattattgtatccaatgacacttaccgagatctgcaagga
gaacgtcctgagtggaagcgttttatagaggagaggcttctgatgtattcgttcgtcaat
gacaagtttatgcctccggatgaccctttgggaagacatggacccaccctagacaacttt
ctcaggaagactccacgtattcctaagaaacagccctgtccttatggaaagaagtgcact
tacggaatcaagtgcaagttccatcatccagagcgaactaagcaatcccagcgtgccctg
gcagatgagctccgagacaaagccaaaatttcatccacactgcacaaacctcaaccaggt
cccagtcagagtccatctccggaggaagtaatggaacagaaactctccctggatgctgga
tctctcaagaagagtcacgccagtgaaaatgtccttgtcattaaagcagccccccagcca
actcaaagaaagctccctttgaaaaaagaacgacggcattcgccaacaagtctagattcc
tttcccaatggatctcaggagcgtttggattctggcttgggttcctacgaatgccattct
cctgaaacttcccattgtgatcgctacagcgaccacaggaagtccaaaccacccaacagt
gggcggcatcgctatgttctggccaatagccaaccttgcagttgctgttcctaccaatcc
ttaagcaccagtggagccggtcagcaccatagcatgggcctgcccagctcaccaaaccca
agttatgctcaaccccagtatcactcctatggaggaggtccagtttacccacctgttaac
atgtcccagtattcatttccacaaagcagagggccttctccccagcagggctactggtct
gaccgttatggtggctatcctccagcgtcccacaattccatccagccagagagaggacat
ggacactggtcgccttccaatcacagtcctcagtggtcagaacgggagcaagtgaggaag
aaattacttgcaattttcaatgcacgtttggtggacagagccatggacaggttcccgtat
ctcctggacccacaaagactggccgcagaaattttgacccttcagtctcaggatggggtt
ttttaa |