Cyprinus carpio (common carp): 109093383
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Entry
109093383 CDS
T05134
Symbol
snrpd1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109093383 (snrpd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109093383 (snrpd1)
03032 DNA replication proteins [BR:
ccar03032
]
109093383 (snrpd1)
Spliceosome [BR:
ccar03041
]
Complex A
U1 snRNP components
Sm proteins
109093383 (snrpd1)
U2 snRNP components
109093383 (snrpd1)
Complex B
U1 snRNP components
109093383 (snrpd1)
U4/U6.U5 tri-snRNP components
109093383 (snrpd1)
Complex C
U2 snRNP components
109093383 (snrpd1)
DNA replication proteins [BR:
ccar03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
109093383 (snrpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
YomU_Tube
Hfq
SM-ATX
AAA_RNF213_3
Motif
Other DBs
NCBI-GeneID:
109093383
NCBI-ProteinID:
XP_042600916
Ensembl:
ENSCCRG00000016483
ENSCCRG00000027883
LinkDB
All DBs
Position
B19
Genome browser
AA seq
120 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVAGRGGRGRGRGRGRGRGRGRGGPRR
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgtcaggtttttgatgaaactgagtcatgaaacagtcaccattgagctgaag
aatggcacgcaggtccacggcaccattacaggtgtggatgtcagtatgaacactcacctc
aaggctgtgaagatgaccctcaaaaacagagagcccactcagctggagtctctcagtatc
cgtggcaacaacatccgctacttcatcctgccggacagtcttcctctggacacgctgctg
gtggacatcgagcccaaagtcaagtcaaagaagagagaggccgtggctggccgtgggggg
cgaggaagaggacggggtcgtggcagaggaagaggacgtggacgcggcgggccgaggaga
tga
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integrated database retrieval system
