Cyprinus carpio (common carp): 109093424
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Entry
109093424 CDS
T05134
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04136
Autophagy - other
ccar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109093424 (atg13)
04136 Autophagy - other
109093424 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109093424 (atg13)
03029 Mitochondrial biogenesis [BR:
ccar03029
]
109093424 (atg13)
Membrane trafficking [BR:
ccar04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109093424 (atg13)
Atg1 complex
109093424 (atg13)
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109093424 (atg13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
109093424
NCBI-ProteinID:
XP_018962705
Ensembl:
ENSCCRG00000004933
LinkDB
All DBs
Position
B7:complement(22773768..22783669)
Genome browser
AA seq
537 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKISTCSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGDVQLTGLGEGFQTVRVGIVGTPI
GTITLSCAYRTNLALMSSRQFERTGPIMGIIIDHFVERPFTNMAHMHPCSYRAPGEDEGG
TYAGIEDSQEVCTTSFSTSPPSQCVCTVSQAHFKTPRPTLMATLKVPLMGLGISQQLYSS
RLSYQTPALGTVDLCHPTTACTAAAHPHQMVVPGKEGGVPQMPAQPTHGTAAEHGRIPSC
PTGQSPQPAPPTSCSSKVKTVSPSDALETTFTRKVGAFVNKPTTQATTTSLDLPFAAFAP
RAYDLQENDPMVHPPPSPAPSSPLQGSLHSNTSSHSGGQPQDDFVMVDFKPAFSKDDLLP
MDLGTFYREFQNPPQLASLSIDVSAQSMAEDLDSLPEKLAIYEKNIDEFDAFVDTLQ
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgatctgagcccacaggacaagaaagacttggataaattcatcaaattcttt
gccttgaagacagtgcaagttatagttcaagcccggcttggagagaagatcagcacttgc
tcttcttcatcaccgacagggtcagactggtttaatctggcaataaaagacatcccagag
gtgactcatgaagcaaaaaaagctcttgctggacagctgcctggcatcggccgatccatg
tgtgtggagatctccctcaaaacctcagagggagactccatggagctggagacgtggtgt
ttggaaatgaatgaaaagtgtgataaggacattaaagtgtcctatacagtttataatcgg
ctgtctctgctcctcaagtctttgctggccatcacaagggtgacacctgcttacaagctt
tcacgtaaacaagggcatgattatgtcatactctacaggatctattttggagacgtccag
ctgacgggtctcggggaagggttccagacagtgcgagtgggtattgtaggcactcccata
ggcaccatcactttgtcctgtgcatatcgcactaatctggccctcatgtcttcaaggcag
tttgagaggacaggccctatcatgggtatcatcattgatcattttgtggagcgtcccttc
actaatatggcacacatgcatccttgcagttacagagcacctggagaagatgagggaggg
acatatgcaggaatagaagactctcaggaggtgtgcaccacgtccttttccacctcccca
ccatcgcagtgtgtgtgtacagtcagtcaggcacattttaagacacctaggccgactctg
atggccacactgaaggttcccctcatggggcttggcatctcacagcaactgtacagctca
cgtctgtcatatcagactcctgccctgggaactgtggatttgtgccatcccacaacagct
tgtactgctgctgcacatcctcaccagatggttgtgccgggtaaagaaggtggagtccca
cagatgccagctcagcctactcatggcactgcagctgagcatggtcgtatcccttcatgc
cccactggacaatcccctcagccggcaccgcccacatcctgtagcagcaaggtgaagact
gtgtccccctctgatgctctagagaccaccttcaccaggaaagttggagcttttgtcaac
aaacccaccactcaggcgacaacaaccagtttggatcttccttttgctgcattcgctcca
agagcctatgacctgcaggagaacgacccaatggtgcaccctcctccatccccggctcct
tcatctcctttgcaaggcagcctgcactcaaacacctcgagccacagcggggggcagcca
caagacgactttgtcatggttgactttaaaccagcattctctaaagatgaccttctgcca
atggatctggggactttctatagagaatttcaaaaccctcctcaacttgcaagcctgtcc
atcgatgtcagcgctcagtctatggctgaggatttggactctcttccagagaaactggcc
atttatgagaagaacattgacgagtttgatgcgtttgtggacacgctacaataa
DBGET
integrated database retrieval system
