Cyprinus carpio (common carp): 109093529
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Entry
109093529 CDS
T05134
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109093529
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109093529
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
109093529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
109093529
NCBI-ProteinID:
XP_042608721
UniProt:
A0A9R0AU90
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Position
B25:complement(1015516..1055607)
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AA seq
645 aa
AA seq
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MGCNLCSLQKREEHYKLLYEISQVNGRDLSRASHEEAAEALRSAKDPIVVQVLRRTPRPR
GQGSAQDVQLVDVCTQTEITFEHIMALAKLRPATPPVPDICPFLLSDSCLSLHTMDQEYL
EGSEYLSNMAADAERTDDFEYEVSFLRLSVTHHLYTQRPLTWKSQFDGRYTEDTALGGRA
ALRLPRDIYVSEIEPNSIAARDGRIREGDRILQINGRDVQDRQEAVAVLSNEECRNIVLL
VARPEIQEEPWLDDEHSEYLEELKMEMLEEEEEMKRAAREEDQKARATQEESITASCSYS
QEKSMEPEKSVLAQIQKQLSRCLSGRSSADGAEKDERCRQLLELKCQIRNGSEYDLFYAR
SSIQCSGVEHELRMLNEELRSIQLECQSIMKVHQLGSRERPEKSDKDSSSAYNTAESSRS
TPLAADRSPEHRRVSLTNRRNLLALRRAPSGSPDHSNPSESEQTPPEGPQCQSYMQLIQQ
QTAVEFVSRPSEPKMEWKVKVRSDGTRYITKRPVRDRLLRERALKIKEERSGGMTTDDDA
MSEMKMGRYWSKEQRKQHLLRAKEQRRRREFMQRSRLESLRENPLSSGEGRSEPSIIELS
HRKMMKKRNKKILDNWMTIQELMTHGEKAPEGSAVHNAFLSVTTV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgtagtttacagaagagagaggagcattacaaactactgtacgag
atctcacaggtgaacgggagggatctgtcgagagccagtcatgaggaggcggcggaggct
ttacgcagcgctaaagaccccatcgtggtgcaggtgctccggcggacccctcggccccgg
ggtcaagggtcagcgcaggacgtccagctggtggacgtgtgcacgcagacagagatcacc
ttcgagcacatcatggctttggccaaactgcgtcccgccacgccgccggtgccggacatc
tgccccttcctcctgtccgacagctgtctctctctgcacacgatggatcaggaatacttg
gagggcagcgagtatctctccaacatggcagcggacgccgagaggaccgatgactttgag
tacgaggtgagcttcctccgtttatcagtaacacaccatttatacacacagcgccctttg
acctggaaatcccagtttgatggcagatacactgaagatacagcgttaggaggtcgagct
gcgcttcgacttcctagagacatctacgtcagcgagatcgagccgaacagcatcgctgcg
agagacggtcgaatccgagaaggagaccgtattttacagataaatgggcgggacgttcag
gacagacaggaagcggtggccgttctctcgaatgaagaatgcaggaatattgtgctgctg
gtcgcaaggccagaaatacaggaggagccgtggctggatgacgagcacagcgaatactta
gaggagctgaagatggaaatgctggaggaggaggaggagatgaagagagcggctcgagag
gaagaccagaaggccagagcaactcaagaagaaagcatcactgcatcctgctcctacagt
caggagaagagcatggagccagagaagagtgtcctagctcagatccagaagcagctgtca
cggtgtctgtcgggccggagctcagcggacggagcagagaaggacgagcgctgtcggcag
ctgctggagctcaagtgtcagatccgcaacggcagcgagtatgacctgttctacgcacgc
agcagcatccagtgcagcggtgtggagcacgagctgcggatgctgaacgaggagctgcgc
agcatccagctggagtgccagagcatcatgaaggtgcatcagctgggatcccgtgagcgt
cctgagaagtcggacaaggacagctcgagcgcgtataacacggccgagagctcacgcagc
acgccgctcgccgcagatcgctctccggagcaccgcagggtcagcctgaccaaccgcagg
aacctgctagctctccgacgggccccgagcggcagccccgaccacagcaacccgtccgag
tccgagcagacgccaccggagggcccacagtgccagagctacatgcagctgatccagcag
cagacggcggtggagttcgtcagccggccttctgaacccaagatggagtggaaggtgaag
gtccggagcgacggaaccaggtacatcaccaagcggccggtccgggacagactcctccgg
gagcgagcgctcaagatcaaggaggagcgcagcggcggcatgacgactgatgacgacgcc
atgagcgagatgaagatgggacgctactggagcaaggagcagcgcaagcagcacctcctg
cgagccaaagagcagcggcggcggcgagagttcatgcagcggagccggctggagagtctg
cgggagaatccactcagcagcggagaggggcgctcggagcccagcatcatcgagctcagc
caccgcaagatgatgaagaagaggaacaagaagatcctggacaactggatgaccattcag
gagctgatgacgcacggggagaaagcacccgagggatccgccgtccacaacgccttcctg
tccgtcactactgtatag
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