Cyprinus carpio (common carp): 109094303
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Entry
109094303 CDS
T05134
Symbol
caprin1a
Name
(RefSeq) caprin-1a isoform X1
KO
K18743
caprin-1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109094303 (caprin1a)
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109094303 (caprin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
109094303
NCBI-ProteinID:
XP_042583444
Ensembl:
ENSCCRG00000025841
UniProt:
A0A9Q9WHE2
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All DBs
Position
B7:15705053..15716626
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AA seq
679 aa
AA seq
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MPSVTTGDNAVHSSSPDLAAAPSEALKQVLGVIDKKVRNMEKKKSKLDDYQTRKNKGERL
NQDQLEALSKAPEVVHNLDFARELQKNFLALNVEIQKTVKKVARRDQLKREEVERKRLKA
VLEVQYLLEQLGEESVRQDLTQSSGDAPVLTESELTGLDEFYKLIGPERDSSVRLAEQFE
EASMHLWELLEGRDKAVAGTTYKALKESLDKMLLSGYFDRAQTHQNGVCGEETGAAAAES
SESEERPAEPEGTAQEYTETIEVEATEFVNRQFIPETTYSSSDKEQGAEWNTSSQAVSAL
QQPQQPPAAMSPALVSSEPHTLNAVLPPPAADPVVRKQAVQDLMAQMQGTFNFMQDSMLE
FEGPPLDPAIVSAQPMKPAQMVCPPESRLPQHNALSVQPEPTQVPMVSAPKEAYSSTPPL
YQPPHNSEPRPQTDSIDPLQVSMPLSSEQTPTPSSQPQVFQPVSKPLHSGINVNAAPFQS
MQAVFNMNAPVPPNNEMDSQKISSQYQSSYGQGFSAQGTLPAEQQEMPQEALQSVGPFHS
QDQGIQSAGGHQSPSQQPSGQGTGFGRPGQSFYSNRAMPRAGPRNPRGALNGYRGQSNGF
RGGYDGSYRAPFPNTPNTGYGQTQFSTPRDYSNNTYQRDGYQQSFKRGATQGPRGCSRGR
GGSYRSSRGMGPMAAQQTS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagtgaccactggcgacaatgctgttcactcctccagtccggatttggccgct
gcaccatctgaagccctcaagcaagtacttggtgtaatcgacaagaaggtccgcaacatg
gaaaagaaaaagagcaagctggatgactaccagacaaggaagaacaaaggagaacgtctc
aaccaggatcagctggaggctttatctaaagctccggaggtggttcacaacttggacttt
gcccgtgagttgcagaagaacttcctggctttaaatgtggagatccagaaaacagtgaaa
aaggtggcacgacgggatcagctgaagagggaggaagtggagcgcaagcgactgaaagca
gtgctggaggtgcaatacctgctggagcagttgggggaggaaagcgtgaggcaggacctg
actcagtccagtggggacgcccccgtactcacagagtcagagctaacgggcctggatgag
ttctacaagctaattgggcctgagcgggactctagtgtaaggttggccgagcagtttgag
gaagcatccatgcatttgtgggagcttttggaaggaagggataaagctgtggctggaacc
acatacaaagcccttaaggaaagcttggacaagatgctgctaagtgggtactttgatcgt
gctcaaacacatcagaatggagtgtgtggagaggaaacgggggccgcagcagcagagtct
tcagagagcgaggaacgccctgctgagccagagggaaccgctcaagaatacacagaaact
attgaggttgaagcaacagagtttgtaaacagacagttcattccagaaaccacctacagc
agcagcgacaaagaacaaggagcagagtggaacacaagttctcaggcagttagtgccctc
cagcaaccacagcagccacctgcagccatgagcccagctctggtcagctcagaaccacac
acactgaacgccgtcctccctccccctgcagcagatcccgtggtccgaaagcaggcagtc
caagatctcatggctcaaatgcagggtaccttcaacttcatgcaggactccatgctggag
tttgagggaccgcctctagatcctgctattgtgtcggcgcagcccatgaaacctgcgcag
atggtctgtccaccagaatccagactaccccaacacaatgctctttctgttcagcctgaa
cccacgcaagtcccgatggtctcggctccaaaggaggcctactcctccacaccccctctc
tatcagcctcctcataactctgaaccccgaccacagacagactccattgatcccctgcag
gtctccatgcccctgtcgtctgagcagacccccaccccttcctctcagccccaggtgttt
cagcctgtctccaaaccccttcacagtggcatcaacgttaacgcagctccattccagtcc
atgcaagcggtattcaatatgaacgctccagttcctccaaacaatgagatggactctcag
aagatttccagccagtatcagagtagctacggtcaaggcttcagtgcacaaggcaccctt
ccagctgagcagcaggaaatgcctcaagaagccctccagtcagttggccctttccattct
caagaccaaggtattcaatctgcagggggacaccagtctccatctcagcagccctcgggg
cagggcacagggtttgggcggccgggtcagtccttttacagcaacagagcaatgccacga
gctggacccagaaatcccagaggggctttgaacggctaccgtggacaatcaaatggattt
agaggtggatacgatgggtcgtatcgcgctccattccccaacactccaaacaccggatac
ggtcaaactcagttcagcactccgcgagattattccaacaacacctaccaacgggatgga
tatcagcaaagcttcaagcgaggagctacccagggacctcgaggttgctctcgaggacga
gggggatcgtaccggtccagcagaggaatgggtcccatggctgcccaacagaccagctaa
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