Cyprinus carpio (common carp): 109094324
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Entry
109094324 CDS
T05134
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccar04812
]
109094324
Cytoskeleton proteins [BR:
ccar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
109094324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_RIG_1st
eIF2A
Beta-prop_VPS8
Beta-prop_DCAF12
PROPPIN
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
RMC1_N
VPS8_N
WD_LRWD1
Ge1_WD40
PD40
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
109094324
NCBI-ProteinID:
XP_042616676
Ensembl:
ENSCCRG00000026881
UniProt:
A0A9Q9YBS3
LinkDB
All DBs
Position
A7:complement(29297437..29306789)
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AA seq
694 aa
AA seq
DB search
MALTNTTITSWKLQEIVAHSSNVSSLVLGKASGRLLATGGEDCRVNIWAVSKPNCIMSLT
GHTSPVECIQFNSSEERVVAGSQSGSLRLWDLEAAKILRTLMGHKASVCSLDFHPMGEYL
ASGSVDSNIKLWDVRRKGCVFRYKGHTQPVHCLAFSPDGKWLASASDDSTIKLWDLIAGK
MITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGAVRSILFN
PDGSCLYSGSENTLRVYGWEPDRCFDVVHVGWGKVSDLAISNNQMIAVSYSQNNVSWYVV
DLSRVKKSGSVIQGLIQDKPIPAPTSALGTTLRRNYERPTTSCTGQEMKQSSEADRRSPE
GERRSPSSEDEKEDKESSAEITNPEDYKEIFQPHSVISRTPPKRTEPFPAPLEHSFSESV
LEKPGPAVKIVTPVIDRAGQLKGPITSSTPVQRVEPTVIAAAPRPVAVVTTSVTSPSRPV
VTTTKPKPSTGIILSARNEPIGLNAGDFLSHARNAKAGVMGDEEALAQIRKGHDTMCVML
TSRYKNLDTVRSVWASGDVKTSLDSAVSMNDLSIVVDVLNILNLKPSLWKLDLCTSILPQ
IEDLLQSKYESYVQTGCISLKLILKRFWPLISDTLAAPPSVGVDITREERHQKCKACYKQ
LKNLSNVVKNRAEQVGRHGSTFKELQLLMAPLDC
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaccaacaccactataacatcatggaaactgcaggagattgtggctcactcc
agcaatgtgtcttcactggtgttggggaaagcgtctgggcgcctgctggccactggcggc
gaggactgcagagtcaatatctgggctgtcagcaaaccaaactgcattatgagtctgacg
ggccacaccagccctgtggagtgtatccagttcaacagctctgaagagcgtgtggtggcc
ggttctcagtctggctctctccggctttgggatttggaggctgctaaaattctgcgcact
ttgatggggcacaaggccagtgtctgcagtctggattttcaccccatgggagaatacctg
gcgtctggctctgtggatagcaatattaagttgtgggatgtgagaaggaaaggatgtgtg
ttcagatataagggtcacactcagcctgtgcactgtctagccttcagtcccgatgggaag
tggcttgcttcagccagtgatgacagcacaataaagctgtgggatctgatagcaggcaag
atgatcactgaattcacatcacacacatcagcagtcaatgttgtgcaattccaccccaat
gagtacctgctcgcctctgggagtgcagatcggactgttaagctgtgggacctggagaaa
ttcaacatgattggctcgtcagagggcgagacgggagctgtgaggagtatattgtttaat
cctgatggtagctgtttgtacagtggctcggagaacacactacgagtgtatggctgggag
cctgaccgctgctttgacgtagtgcatgtaggctggggcaaagtttctgacctggccatc
agcaacaaccaaatgattgcggtgtcctacagtcaaaataatgtgagctggtacgtcgtt
gatctcagccgagtgaagaagtcaggatctgtgatccaagggctgattcaggacaagcca
atcccagctcccacatctgcactaggaacaacactaaggcgaaattacgaacgacccact
acatcctgcactggacaggagatgaagcagagttcagaggccgatcgccggagtccagaa
ggagagaggagaagccccagcagtgaggatgagaaagaagacaaagagagcagtgcagaa
atcaccaacccagaagattataaagagatctttcagccacacagtgtcatctcacgtacg
ccacctaaaagaacagaacctttcccagctcccctagagcactctttctcagagagtgta
cttgagaaacctggcccggcggttaagattgtaactccagtaatagacagggcaggacag
ttgaaaggtcccattacctcctctactccagttcaaagagtggaaccgacagtgatcgct
gctgctccccgtccagtagcagtggtgaccacatcagtgacctctccctctcgtcctgtg
gttacgaccaccaaacctaaaccttctacaggaatcatcctctcagcacgcaacgagcca
attggcctcaatgcaggggacttcctttctcatgcacgaaacgctaaagccggggtgatg
ggagatgaagaggcgttagcacagatcaggaaggggcatgacaccatgtgcgtaatgctg
accagtcgatataaaaacctggacacagtacgctccgtctgggccagtggagatgtcaag
acttccctggattcagctgtatctatgaatgatctttctattgtggtggacgtccttaac
atactcaaccttaaaccttcactgtggaaattggacctctgcacgtccatcttgccacag
attgaggatttgctgcagagcaaatatgaaagttatgtacagactggctgtatatcttta
aagctgattctgaagcgtttttggcctttaatctcagacacgctggctgctcctccatct
gtaggagtagacattactcgagaggagaggcatcagaaatgtaaagcatgctataagcag
ctgaagaacctcagtaatgttgtgaagaaccgggcggagcaggttggtcgtcatggcagc
actttcaaagagctacagctacttatggccccactggactgctga
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