Cyprinus carpio (common carp): 109094423
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Entry
109094423 CDS
T05134
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109094423
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109094423
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
109094423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
AAA_19
AAA
Motif
Other DBs
NCBI-GeneID:
109094423
NCBI-ProteinID:
XP_042585791
UniProt:
A0A9Q9WMT4
LinkDB
All DBs
Position
B8:complement(13870294..13878531)
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AA seq
767 aa
AA seq
DB search
MAASMNAAHELQYRSRTEDVLISGGVEFSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLG
RCGLDLIVQAKSGTGKTCVFTTIALDSLILENTTTQVLVLAPTREIAVQIHAVVMAIGSA
MEGLECHVFIGGRPVSQDKLHLKKCHIAIGSPGRIKQLIEMGVLTTSSIRLFVLDEADKL
LEDDSSSSFQEQINWIFSSLPANKQMLALSATYPESLAKYLSRYMREPTFVRLNPTDPGL
LGLKQYYKIVPSHSLPHKVFEEKVQSLLELFSKIPFNQALVFSNLHTRAQHLADILSSKG
LPAVCISGELHLDQRLEAMWKLKQYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETY
MHRIGRAGRFGTLGVAVTYCCHGEEENKMMAIAQKCSLNLIHLPDPIPPGIMEEACDWDV
IIEPPSKPTQKIPDIPKPEKKKQSKSEKPTSKPSREPHISTVIPERTTGDKSYRGAETKV
KKHSPKPGRPKPIQSTTDLQHDSTLTQNEQNDTLPKIPPLSSFKLHARKAMTFSEAVADY
ENFITEGLGRSVEIIRQYEGFNRSRDAVNGLHNDHDDGDDNDKAYKSYAIEESYSHQDLP
PPQEVSEMSTEQKTRSVLSDDSSSECEMEEENESSSSVPTPSSHHTPALPDKRVSELKES
SVPSARVSQQTSRNKQRPSKPQSQNPANHHSLSQKHRPASSRKAASAGHKGRKRESDELE
EEVAGQDYWSSYRAWVEYYNSYYHCSPYNWMTAFYMNSVYIKEMMKH
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatccatgaacgcagcgcacgagctgcaatacagatcccggacagaagatgta
ctgattagcgggggtgtcgaattcagctcgttactcctctcaaaacctgtgcttgagggg
ttatctgcctctggctttcagagaccgtcccctatccagctgaaagcaatcccgctggga
agatgtggactcgatcttattgttcaagccaagtctggcacaggaaaaacctgtgtgttc
accaccatcgctttggactctcttatattggaaaacacaaccacacaggtgctggttttg
gcccccactcgggagattgcagtgcagattcatgctgttgttatggctataggcagtgct
atggagggcttggagtgtcatgtgttcattggtggccgccctgtcagtcaagacaaactg
cacctgaagaaatgccacattgccattggttcaccaggtcgtattaagcagcttattgag
atgggcgtcctgactacatcctccattcgcttgtttgttttggatgaggctgataagctg
ctggaggatgacagcagcagcagctttcaggagcagatcaactggatcttctcttcttta
ccagcaaacaaacaaatgttggccctctctgccacctacccagaatctttagcaaaatat
ctgtcgagatacatgagagagccgacgtttgtgcgactgaacccgacagaccctggactc
cttgggctgaagcaatactataaaatcgtgccgtctcattcattacctcataaagtcttt
gaggagaaggttcagagtctccttgaactcttcagcaaaatcccatttaaccaagcgctg
gtattctcaaacctccatacaagagctcagcacctggctgatatcctctcctctaaaggt
ttgcctgcggtctgcatctcaggtgagcttcaccttgatcagcggttagaggcgatgtgg
aagctgaaacagtatcagtgtcgagttttaatatccactgatctgacctcacgtggtatt
gatgctgagaaggtgaacttggtgattaatctggatgttcctcaggactgggagacctac
atgcaccgtattggtcgtgctggacgatttggcactctgggggttgctgtgacctactgt
tgccatggagaggaggagaacaaaatgatggccatcgctcagaaatgttctctgaatctc
attcatttaccagatccaatccctccagggatcatggaagaggcttgtgactgggatgtg
ataattgaaccaccttcaaaacccactcagaaaattcctgacattcccaaaccagagaag
aagaaacaatcaaaatctgaaaagccgacatcgaaaccctccagagagcctcacatctcg
acagtcatcccagaaaggacaacaggtgataaatcctacagaggagctgaaaccaaggtt
aaaaagcactctcccaaacctgggaggccaaaaccaatacagtctactacagacctccag
catgactcgactcttactcaaaatgaacagaatgacacccttcccaaaattcctccacta
tcgtcttttaagttgcatgcacggaaagctatgactttcagtgaggctgtggcagattat
gagaatttcataacagaaggtctgggaagatctgtggaaatcattcgccaatatgaagga
ttcaacagaagtcgagatgcagttaatggattgcataatgatcacgatgatggggatgat
aatgataaggcttataaatcatatgctatagaagaatcgtactcccatcaagatcttcct
ccaccacaggaggtttcagagatgtccactgagcagaagactcgttctgtgttatctgat
gattcttcttcagagtgcgagatggaggaggagaatgaatcaagctcttctgtccccact
ccgtcttcacatcacacacctgctcttccagacaagagagtctcagagttgaaagaatcc
tctgtaccttcagccagagtatcacaacagactagcagaaacaagcaaaggcctagtaaa
cctcaatcccagaatcctgctaaccaccacagcctttcccagaaacaccggccggcctcc
agcaggaaggctgcctcggcaggacacaagggaagaaaaagagagagtgatgaactggaa
gaggaagtggccgggcaagattattggagctcatacagagcctgggttgaatattacaat
tcatattatcactgctcaccctataactggatgactgcgttttatatgaattctgtctac
ataaaagaaatgatgaagcactaa
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