KEGG   Cyprinus carpio (common carp): 109094522
Entry
109094522         CDS       T05134                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04382  Cornified envelope formation
ccar04510  Focal adhesion
ccar04512  ECM-receptor interaction
ccar04514  Cell adhesion molecule (CAM) interaction
ccar04518  Integrin signaling
ccar04810  Regulation of actin cytoskeleton
ccar04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109094522
   04514 Cell adhesion molecule (CAM) interaction
    109094522
   04518 Integrin signaling
    109094522
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109094522
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109094522
   04810 Regulation of actin cytoskeleton
    109094522
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    109094522
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccar04147]
    109094522
   04515 Cell adhesion molecules [BR:ccar04515]
    109094522
   04090 CD molecules [BR:ccar04090]
    109094522
Exosome [BR:ccar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109094522
  Exosomal proteins of breast milk
   109094522
Cell adhesion molecules [BR:ccar04515]
 Integrins
  Integrin alpha subunits
   109094522
CD molecules [BR:ccar04090]
 Proteins
  109094522
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 FG-GAP_2 NdhN
Other DBs
NCBI-GeneID: 109094522
NCBI-ProteinID: XP_042613124
Ensembl: ENSCCRG00000016674
UniProt: A0A9Q9Y3S7
LinkDB
Position
A1:20230507..20253107
AA seq 1079 aa
MGSYRTLTLPLLSLLGWSLISAFNLDTDYVIKKTGDANSLFGFSLAMHRQLRPADKRMLL
VGSPRARALPGQKSKITGGMYNCDIHSPSQSCQRVMFDNEENDLSEIKENQWMGVTVQSQ
GPGGKILVCAHRYQRRMFMGSVQELRDLTGRCYVLSEDLTINSASDEDGGDWIFCNGRNR
GHERFGSCQQGLSATFTKDHHYLVFGAPGAYNWKGVVRIEQKNSSLWERNIFDDGPYEVG
DESRLDPDLVPVPANSYLGFSLDSGKMLTKRGQLIIVAGAPRANHSGAVVLLKKDSSMLT
AEYILEGAGLASSFGYDLAVLDINGDGWQDIVVGAPQYFIKDGDVGGAIYVYLNEEGAWD
KITPKRIEGAAYSMFGLAVENMGDVNMDGCHDVAVGAPYDSNGAGNVYIFHGSPQGLKKT
QVLGGKDHNVKLFGYSLAGNMDLDRNYYPDLAIGSLSDSVFVYRARSVISIEKTVTTTPK
ELDLTKKNCGKDICFEVKACFKFSVKPKTYNPTLKVQYSIKVESERKKLNLPSRVIFTPR
SVNEYESTGDVELKGQGTESCVSRVLRLQEPLRDKLRGIPIEVSVEILNPSTRRKRQNAL
PKLLPILDSHQDARTVTKVQFIKEGCGADNVCQSDLQLQYKFHTREPNRDIFNPLPEEKG
VPILSLSDQKDIALEIKVLNKGEDAYEAQLTSSFPKSLSYSDVHTESDDKTVTCLANQNG
SQADCELGNPFKKDAETTFYIILSTGGISLDTTEIEIDLKLKTTSNQKQLQAIKAKAIVK
IQLLLSLSGIAKPSQVFFTGEVKGESAMKLATDVGSPIDYEFRVTNLGKPLKSFGTASMN
IQWPKHNSQGKWLLYLMKMTSTGLDSFICSNQDEVNKLSLKEPSVSRTKREIGETPAKEG
TVSLFTEKRKYTVLSCEDGAECITFRCPLRGMDSNAVISLRAYLWNSTFLEDYAKLNYID
IIVKASLDFKTSATNIQLKNEAAQVRVIVFPERKVPQYGGMPWWVILVAILLGLLMLGLL
VFLLWKCGFFKHSKYESIPSYNAVWIKKEERGKEPGEEEMDPREKKQWMAFWNENESYS
NT seq 3240 nt   +upstreamnt  +downstreamnt
atgggatcttacaggacattgactttaccgcttctcagtttgttgggatggtcgctgatc
tctgccttcaacctggacacagactatgtaatcaagaaaacgggagatgccaacagcttg
ttcgggttctcccttgccatgcaccgacaactcagaccagctgataaaagaatgttgctt
gtcggttccccaagggctagggcattgcccgggcagaagtcaaaaattacaggaggcatg
tacaactgtgacatacattctcccagtcagtcatgtcaaagagtgatgtttgacaatgaa
gaaaacgacttatctgaaattaaggaaaaccagtggatgggagttactgtacagagccag
ggacctggaggaaagatattggtctgtgcgcatcgctaccagcgccgcatgtttatgggc
tcagttcaggagctgcgtgacttgaccggtcgctgctacgtactaagtgaggacctaacg
attaatagtgcctcagatgaagatggaggagactggatcttctgcaacgggagaaacaga
ggacacgagcgctttggatcatgccagcagggtctatctgccacattcacaaaggaccat
cactatctggtgtttggagcaccgggtgcttacaattggaaaggagtggtgaggatagag
cagaagaacagttctctgtgggaacggaatatctttgatgacggcccatatgaagttggg
gatgagagccgacttgatccagacttggtgcctgtccctgctaacagttatttaggtttc
tctctggactctggaaaaatgctgaccaagagaggtcagttgattatagttgctggggct
ccaagagccaatcacagcggggcagttgtgctattaaagaaggactcatccatgttgaca
gctgagtacatcctagagggtgccggacttgcctcttcctttggctatgatcttgcagtg
cttgacatcaatggagatgggtggcaggacattgtagtcggagcacctcagtactttatt
aaggacggtgatgtcggtggggccatctatgtttatcttaacgaggaaggggcttgggac
aagatcacccctaaaagaattgagggagctgcttattccatgtttggtttggctgtggaa
aacatgggagatgtgaacatggatggttgtcatgatgttgctgttggtgccccatatgac
agtaacggagctggaaacgtatatatcttccatggttcacctcaaggactgaaaaaaacc
caggttcttggaggaaaagatcacaatgtgaaactctttggatactctcttgccgggaac
atggatttggacagaaattattaccctgatctggctatcggatctctctctgattcagtg
tttgtgtacagggcccggtcagttatcagcattgaaaagactgttaccaccactccaaag
gagctagacctcactaagaaaaactgtggaaaagatatatgctttgaggtgaaagcctgc
ttcaaattttcagtcaaacccaaaacctacaatcctactctgaaagtgcaatactctatc
aaggttgaatctgaaaggaagaaacttaatcttccttctagagtcatcttcaccccgcgc
tcagtaaatgagtatgaaagcacaggagatgtagagctcaagggtcagggcacagaaagc
tgcgtctccagagtcctcagactgcaggaacccctaagagacaaactgagaggaatcccg
attgaagtctctgtggagatcctgaacccatccacacgtaggaagagacagaatgctctc
cctaaactgcttcccatcctggactctcatcaagatgccagaactgttaccaaggttcag
tttatcaaggaaggatgtggtgctgataatgtctgtcagagtgacctgcaactacagtat
aaattccacaccagggaaccaaacagagacatctttaatccattacctgaggaaaaagga
gttcccatcctgtctctgagtgatcagaaggatattgccttggagatcaaggtgctcaac
aagggtgaagatgcttatgaagcacagctgacttcctcgttccccaaatcgctctcttat
tctgacgttcacactgaatctgatgataagacagtcacctgtctagccaatcagaacggg
tcacaagctgattgtgaacttggaaatccattcaaaaaagatgctgagacaactttttac
atcattctgagcacgggtggaatttctttggataccactgaaattgaaattgaccttaaa
ctcaaaacgacaagtaatcagaagcagttgcaagcaatcaaagccaaagccattgttaag
atccagctgctgttgtccctctcaggcattgctaagccatctcaggtcttctttactgga
gaagttaaaggagagagcgcaatgaagttggcaactgacgtgggcagtccaattgactat
gaattcagggttacaaatttgggcaaaccccttaaatcattcggcacggcttctatgaat
atccaatggcctaaacataactctcaaggcaagtggctgctgtacctcatgaagatgacc
tcaaccggtttagacagcttcatctgctccaaccaagatgaagtcaacaaactcagtttg
aaggagccttcagtgtcacgaactaaacgtgaaattggggaaactcctgcaaaagaggga
acagtctctctttttactgagaagaggaaatacacagttttgtcgtgtgaggatggggcg
gagtgcatcacattcagatgtcctctaaggggaatggacagcaatgctgtcatcagtctg
agagcgtacctttggaactctaccttcctggaggactatgcaaaattgaactacattgac
attattgtcaaggcatcacttgatttcaagacctcagctacaaatatccagctgaaaaat
gaagcagcacaggtacgtgttattgtgtttccggaacgcaaagttccgcagtatggcggt
atgccctggtgggtcatactggtggccattttactaggactccttatgctgggccttttg
gtgttcttgctttggaagtgtggatttttcaaacattccaagtatgaaagcatccccagt
tataatgctgtgtggataaagaaggaagagaggggaaaagagccgggggaagaggaaatg
gatcctcgggagaagaaacaatggatggctttttggaatgagaatgagagctactcatag

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