Cyprinus carpio (common carp): 109094709
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Entry
109094709 CDS
T05134
Name
(RefSeq) serine/arginine-rich splicing factor 2-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109094709
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109094709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109094709
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
SR proteins
109094709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_8
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109094709
NCBI-ProteinID:
XP_042591732
Ensembl:
ENSCCRG00000038624
UniProt:
A0A8C2AHK4
LinkDB
All DBs
Position
B12:complement(17478139..17481697)
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AA seq
222 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYSRRGAPPRRYGGHGRKSRSR
SPRRRRHSRSRSRSRSRSRSRSRYSRSRSKSYSRSRSRSRSRSKTRTPRRSKSKSASRSR
SRSKSKSHSRSHTPRSNKGSKSRSRSRSRPKSPEDTGATAES
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggcagacctccgcccgacgtcgagggcatgacatctttaaaagtcgacaat
ctgacgtaccgcacgtctcctgaaacgctgcggcgggttttcgagaagtacggccgggtc
ggcgacgtctacatcccgagagaccggtacacaaaagagagccgcgggttcgccttcgtc
cgttttcatgataagcgggacgcggaagatgcaatggacgccatggacggcgcgctgctg
gacgggcgcgaactgcgcgtgcagatggcgcgatacgggcgcccgccagattcgcattac
agccgccgcggagccccgccgaggaggtatgggggacatggacggaaaagccgaagccgt
agtcctcggcgcaggaggcacagcaggtctaggtccaggagcaggagccgttcccgtagc
aggtcccgctacagccgatccagatccaagtcctactcccgttcccgatctaggtcccgt
tcccgctctaaaacccgcacaccacgcagaagcaagtccaaatcggcttccaggtcccgt
tccagatccaagtccaagtctcactccaggagccatactcctcgatccaacaaaggatcc
aaatcacgatccagatcgagaagcagacccaaatctccagaggatactggagccactgct
gaatcctga
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