Cyprinus carpio (common carp): 109094747
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Entry
109094747 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: C-myc promoter-binding protein-like
KO
K20163
DENN domain-containing protein 4
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109094747
Membrane trafficking [BR:
ccar04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
109094747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
CAS_CSE1
Motif
Other DBs
NCBI-GeneID:
109094747
NCBI-ProteinID:
XP_018963999
LinkDB
All DBs
Position
16:11002555..11034005
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AA seq
1713 aa
AA seq
DB search
MEDKSLRVADYFVVAGLTNSSKPLEEDVHPEDGGHRSSAQLKAPITDVAVVIRSLGEEVP
RGYTCVECTPSGLPAELNGGSLKASDLIVPKPSSRHVLFEWKEKLKPDCQIIQTTPSGRP
ANISSSSSQRIYITYRRASENHSHATLAVTDICVIIPSKGETPPHAFCKVDKNLNSSMWG
SSVYLCYKKSLAKTNTLAFKAGLLSRYPEEDYDSFPLPESVPLFCLPTGASIECWPSRTK
YSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEEHLTDKQRSQLGLQANGLRPDGSMTVHT
NKSICLLSHWPFFDAFHNFLTFLYRYSISGPHTLPIEKHISHFMHKVPFPSSQRPRILVQ
LSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPKNAATLLVLAVTEHKILVHSLRPAVLT
SVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYEPPTDISCVDL
DTNTITHKEERRSLTWKILPRKACKHLINTLSSLHQQLDEGYQMSREEGQMEAFMSEREP
GSGGKSLETLELEIQEAFLRFMAAILKGYRSYLLPITQAPSEKSTDSSSLFDLQGFLKSR
DRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFGTEKGGKVDSDKPED
TRLIELDKSHRSEHTVYITPPELPALPEGEEPPMVYSYSGFPVLNAQLCELQDGPRVPKA
TSAVRHISPISPAAIFRRSQQEIKSAQRMAKTYSSIPQMWSKCLLRHCHGLWFMCLPAYV
SACHSKVRALHTAYDVLRNMQDKKLQPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMKKAG
VQPNAITYGYYNRLISMFFSCTWPSSTRGGYFLWGKLRNVVRGVVLFKQVWRRQTTHPKD
THLSDASDLDSVSHGSLDSSNDLVERVSIDTDFTKMDSSDDRSSTGGQSDQGYDSLSKEE
VRLGGGEEQNSSPDMKEKKDRKLLAPLSQTVLPKKEDSSPMVGIHPSATNGETSDVFSEA
LPKTKRPNSLDIFGEKPVRPSTLDLTPDKTVGELSNESVPTXDRTEAVGGVVSPPKVAVG
RTLSCTVAMEKEHIGVERSASCSSALGRVVERTGIEAGFDPLSLMVAETQAHSEGDNTDI
PTTRRDLAEEIHHYMNNLSSPLSQRSLSVDLKGRQTPSPHSSPRTSAALSSPSTSQLQPQ
PRTRLFSSPSLPQGRVRRVRDQRPASLASPSSPTPSSSSFSMDSLLTPTLDVFKSSFLSA
GKGVAEKASRLYSRLSSQTSIAQDLNSDRVSVSSLGSGDPDCSSLIESDSCVDPDGLSSP
QRDATHPVTRPKRSPYRSNHCLESPSAPPRLYRQSSLTGPPLTVMKALQTPDACSDSSIS
QSMQNYAVEVRMSSCSHCNTCESLVYDEEIMAGWTADDSNLNSTCPFCGSPFLPLLNVDI
RNLGDQERSPSEDAHSCQTDTADELPQVHDATGNLSSNGKKDPEPVTVPYLSPLVLWKEL
ESLLENEGDQAISSAAIVDHHPIVFWNLVWFFRRLDLASSLPGLYLSSKHYCSDSQPLQS
CASEDSKNVLVQILWDNPRLHQDPIKPCYLLWNSYCANPAVSEEEEQAVSLELLQSVVKS
IQRNDVYQPMSQILQLLGTRLGFVRQRSLYRDILFLSLVALGKSSINIDAFDREYKMAYD
RLTPSQVKMTHNCDRPPSAGVMECRRTFGLPSL
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaagccttcgtgtagcagactactttgtggtggcaggactcaccaactcg
tctaagcccctcgaggaagatgtccaccctgaggatggtggccataggagttcagcccag
ctcaaggcgcccatcactgatgtggctgtggtgattcgttccctaggggaggaagtacct
cgagggtatacctgcgttgaatgcaccccctctggacttcctgccgaactgaatggagga
agcctcaaagcttcagatttgattgttccaaaacctagcagtagacacgtcctctttgag
tggaaggagaaactaaagccggactgtcaaattatacagaccacaccctctggccgcccc
gctaatatcagtagctcctcctcccaaaggatctacatcacatatcggcgtgcctctgag
aatcactctcacgccacgctggctgtcacagacatctgtgtcattattcccagcaaggga
gagacaccaccacatgctttctgcaaggtggacaagaatctcaacagcagtatgtggggg
tcctctgtgtacttgtgctacaaaaaatctttggcaaaaaccaacactcttgcattcaaa
gcaggtcttttgtccagatatccagaggaggattatgattcctttcctttgcctgaatcc
gtgcccctgttttgcctgccgacgggagcgtcgattgagtgctggccctctcgtaccaaa
tattctcttcctgtcttttcaacattcgttcttacaggcgcctctggagagaaggtttat
ggtgccgccatccagttctatgagccctacccagaagaacatttgactgacaagcagcga
tctcagctgggtctgcaggctaacgggctcaggcctgatggatccatgactgtccacacc
aacaaaagcatctgccttctctctcactggcccttttttgatgctttccataacttcctg
accttcctctacagatactccatctcaggtccacacactctgcccattgaaaagcatatt
tcccatttcatgcacaaggttcctttcccttcctcacaaaggccacgtatcctggtgcag
ctgtctccacatgatagcctgatgctgagccagcctgtttcctctccactccctctgagt
ggcggaaggctctctacactgctgttgaacctcggcccaaaaaatgcagcgactctgctg
gtgttggctgtgactgaacataagatactagttcactccttacgaccagctgttcttacc
agcgttaccgaggccctggtgtcaatgatttttcccttccactggccgtgcccatacatt
cctctctgcccgctggccctggcagatgtgctcagtgctccatgtcctttcattgtaggg
gtggactcaaggtactttgacctctatgagccaccgacggacataagctgtgtggacctg
gacaccaacactataactcacaaagaagagcgcagatccctgacctggaagatcctgcca
agaaaagcctgtaaacatctgatcaacaccctcagcagtctccaccagcagctggatgag
ggttatcagatgagccgtgaggaaggacagatggaggccttcatgagtgagcgggaacct
ggcagtggtgggaaaagtctggaaaccttggagctggagatccaggaggctttcctgcgc
ttcatggcggctatcttgaaaggctaccgttcatacctgttgcccatcacacaggctcca
tctgaaaaatcaactgactccagttcactctttgatttgcaaggctttttgaagagtcgt
gatcgatcccatcaaaagttttacaccctcatgaccaagactcagatgttcattcgtttc
atcgaagagtgctcttttgtcagcgataaggatgcaagccttgctttctttgatgactgt
gttgacaagttattcggtacggagaaggggggaaaagttgacagcgataagccagaagac
acaaggcttattgaacttgacaaatcccaccgcagcgagcacacggtctacatcacccct
ccagagctgccagcacttccagaaggagaagagccaccgatggtttatagctacagtggg
tttccagtactgaacgcccaactctgtgagcttcaagatggtcccagagtccccaaagca
acatcagccgtgagacacatcagtcccatcagcccagctgccattttcaggcgttcccaa
caggagatcaaatcagcccagaggatggctaagacgtactcttccatcccacagatgtgg
tccaagtgtctgctcaggcattgtcacggcctgtggttcatgtgcctgcccgcgtatgtc
agcgcctgccactcaaaggtgcgggcactgcatactgcttacgacgtgctgagaaacatg
caggacaaaaagttgcagccccctgatgaggtgtgttaccgggtcctgatgcagctgtgt
gggcagtatgggcagcctgttcttgctgtccgggttctttttgaaatgaagaaagccgga
gtgcagcctaatgctattacctatgggtactacaacaggttaatctctatgttcttctcc
tgcacatggccttcctccaccagagggggatacttcctgtggggaaagctgagaaatgtg
gttcggggtgtggtgctgttcaaacaagtatggaggaggcagaccacccacccaaaagac
acccatctctctgatgccagtgatctcgacagtgtcagccatggcagtctggacagctct
aacgatttggtggagcgagtttccattgatacagacttcactaaaatggattccagtgat
gacagatccagcacaggtggtcagtctgatcagggctacgattctctgtctaaagaggag
gtgaggttaggaggaggtgaggagcagaactcctctccagacatgaaggagaagaaggac
agaaaacttttggccccattgtcccagactgtactccccaagaaagaggattcatctcct
atggttggaatccatccatctgcaaccaacggggaaaccagtgatgtcttttctgaagcc
cttccaaaaacgaaaaggccaaactccctggatattttcggagaaaagcccgtaaggcca
agcactctggatctaaccccagataagacagtaggagaactcagcaatgaatctgttcca
acanttgatcgaacggaagcagtggggggcgttgtgagcccacctaaagttgctgtgggg
aggactcttagctgcacagttgccatggagaaggagcatattggcgtggagaggagcgcg
agctgcagcagtgctcttggaagagtggttgagaggacaggtatcgaagcagggtttgac
cctctgtccctcatggtggctgagactcaagcccacagtgagggcgataatacagacatc
cctaccacccgccgagacctggctgaagagattcaccactacatgaacaacctgagcagt
ccgttaagccagcggtctctcagtgtggacctgaagggccgtcagaccccgtcccctcac
agctctcctcgcacgtctgcagcactcagctcccccagcacctctcaactccaacctcag
ccacgaacacgactcttctcctcgccctccctccctcagggccgcgtgcgcagggtcagg
gaccagcggcccgcctccctggcctccccttcctcacctactccctcctcttcctctttc
tccatggactctctgctcaccccgacccttgacgtgtttaagagcagcttcctctctgct
gggaagggcgtcgctgagaaagccagccgactatattcgcgactttcctcccagacatct
attgcacaggacttgaactctgaccgggtcagtgtgtcctctctggggtcaggtgaccct
gattgctcctctctgattgagagcgattcctgtgtagaccccgatgggctgtcttccccg
cagcgcgacgccactcacccagtcacacgtcccaaaaggagcccttacaggagcaaccac
tgcctagaaagtccatctgcaccacctcgactctaccgccagtcctcactcactggtcca
ccgctgacagtaatgaaagctctgcagaccccagatgcatgttctgattccagcatttct
cagtccatgcagaactacgctgttgaagtacgcatgtccagttgttcacactgtaacacc
tgtgagagtttggtgtatgatgaagagatcatggctggttggacagctgatgactctaac
ctcaatagcacatgccccttttgcggctctccgtttctgcctctgctcaatgtggacatc
agaaacctgggtgaccaggaaagatccccctctgaagatgcacattcttgccagacagac
accgctgatgaacttccacaagttcatgatgccactggcaatctatccagcaatggcaaa
aaagaccctgagccagttaccgtgccctatctgagtcctctggtactttggaaggaactg
gaaagcttgctggagaacgagggggaccaggccatctcatctgcagccattgtggatcac
caccctattgtgttctggaatctggtgtggtttttccgtaggctggacctggccagcagc
ttgccgggcctctatttgagctccaaacactactgcagtgattctcagcctctgcaaagt
tgtgcatctgaagacagtaagaatgttttggtccagatcctatgggacaatcccagactg
catcaggaccccatcaagccttgctacttgctctggaattcatattgtgcaaatcctgca
gtgtctgaggaggaggagcaggctgtgagcctagagctgctgcagagtgtcgtgaagagc
attcagaggaacgatgtctaccagcccatgagtcagatactgcagttactgggcaccaga
ctgggcttcgtcagacaacggagcttatatagagatatcctgttcttgtctttggtggct
ttgggcaagagtagcataaatattgatgcatttgaccgtgaatacaaaatggcatatgac
cgtctgacgcccagccaggtcaagatgacccacaattgtgaccgtccacccagcgctgga
gtcatggagtgcaggagaacctttgggctgcccagtctctga
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integrated database retrieval system
