Cyprinus carpio (common carp): 109094924
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Entry
109094924 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein GLI1-like
KO
K16797
zinc finger protein GLI1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109094924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109094924
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
109094924
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
MFMR
Adeno_PIX
zf_C2H2-Disco
Motif
Other DBs
NCBI-GeneID:
109094924
NCBI-ProteinID:
XP_042613420
LinkDB
All DBs
Position
A6
Genome browser
AA seq
1380 aa
AA seq
DB search
MPVDMQPHQGLYHYNNTANQPSRGLARSVQSLYSEVPLDSREMFNPSVTPGACMDPYMRP
PHGMMGHRGMPPPESAPYCTQSMMGSHHNLTHNQLGSEHMGSGDASCFSTPRSMLKLSKK
RALSISPLSDASVDLQTVIRTSPNSLVAFVNSRCGPNAASSYGHLSVGSMSPSLGFSGSM
NYSCRPQGNMYGSLAASCPRLHAPAKHTHLKTEPVLGRVMDSINIKNLEEHSEGDVASPS
STGTQDPLLGLLEGRDDLDKEEKPEPEAIYETNCHWESCSKEFDTQEQLVHHINNEHIHG
EKKEFVCHWQDCSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLR
SHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHV
KTVHGPEAHITKKHRGDTGPRPPGLTNAGQSSELLIEKEERSREDCKLLAPETALKSQPS
PGGQSSCSSERSPLGSANNNDSGVEMNLNAAGSLEDLTTQEESGNTAVSESGGGSGGMCM
SVQALKSLENLKIDKLKQIRRPTPPGRSAGNKQPHLSTTGEMMGMCAPSPLLSNRRVMEL
SAPDLAGVSGMGMPCTKRXGSGTSSLSSAYTVSRRSSMVSPYLSSRRSSDVSQVGHCQSV
MGTDVPGDPLSPQNSKRGGSCQNLGGLPGLPSLTPAQQYSLKAKYAAATGGPPPTPLPNM
DQPGNPGRFLRECHGQPIPPFLQQGGTRRHSANTEYGTGVIYPHQAPGNNMRRASDPVRS
GADPQGLPKVQRFNSLSNVSLMSRRNALQQCGSDAPLSRHMYSPRPPSITENVMMEAMAM
DPHGTAEGREQGNMIQGGDRAYMGYQQPQQCNHPHNASQLSPRQEGLSCMDQVYQPQMQG
PYQREEICATGIMGQGDIANNLLQQAEFGMSNCQLSPPXSNYPSQGDGSGPWGQTNQLHS
PQTDMQYQCAGMQGQHYPQQSVYDPTSNPGHQRVTVKPEQFHSSMGGSSSCQNTKPLHQH
RRVNMQAYPPQSGQGIMGRSSNANCDFHHGQMRTQVGLPQQSQAGSFPSGGGINLALAES
RRSQMPMHQMKEMMVRNYVQSQQALLWEQQQEQTVLDGLSGKPDGMEMGGHPQANQNLYP
GNSFQGYPNQNLMSPPQNRVPGSIKEHTAGMQGSCYGPDMVPRPPQGRKPLSRQNSLSQQ
TGGAYLGSPTHRPVHSTASPRRAVRLPPVQQQQQHSENFTNNNNNPMYYSGQIHMHHDIE
KTQDGPCLAQQHLTGIDPSTKPTSMAYSDPAPMSNALENLDLENAQIDFTSIIDDQEPSS
YSPINPPLGHHQCSSQTSSRLTTPQTSITLPSGLSNMAIGDMTSMLTSLAGENKYLNTLS
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggatatgcagccgcatcaggggctgtaccactacaacaacaccgccaaccag
ccgagccgaggactggctcggtcagtgcaatcgctctacagcgaggtgccactcgacagc
agagagatgtttaacccctccgtgaccccaggagcctgtatggacccctacatgcggccg
ccgcacggcatgatgggacaccgcgggatgcctccgccagagagcgccccctactgtacc
cagagcatgatgggatctcatcacaacctcacgcataaccagctgggatctgaacacatg
ggatcaggagacgcgtcttgtttctcgacgcctcgctccatgctgaagttgagtaagaag
cgtgcgctgtccatctctccgctgtctgatgccagtgtggacctgcagacggtcatccgc
acctcgcccaacagtctggtggcgtttgtgaactctcgctgcgggccgaacgctgccagc
tcatacgggcatctgtctgtgggcagcatgagtccgtcgttgggtttctccggctctatg
aactactcttgcagaccgcaggggaacatgtacggctctctcgctgcctcgtgccccaga
ctccacgctccggccaaacacacacacctgaagacggagccggttctgggcagagtgatg
gacagcattaacatcaagaacctggaggagcattcggagggagacgtggccagtccatcc
tcaactggaacccaggatcctcttctgggtttactggagggcagagatgatctggataaa
gaggagaaacctgaaccagaggctatttacgagaccaactgccactgggagagctgcagc
aaagagttcgacactcaggagcaactcgtgcatcacatcaataacgagcacatccacggg
gagaagaaggagtttgtgtgtcactggcaggactgctctcgagagcagcggccctttaaa
gcccagtacatgctagtggtgcacatgcgcagacacaccggagagaaacctcacaagtgc
acttttgaaggctgtaataaagcatactcgcgcctggagaacctgaagactcatctgcgc
tcgcacaccggcgagaaaccctatgtgtgtgaacacgagggctgcaacaaggctttctcc
aatgcgtcagaccgcgcaaagcaccagaaccgaacacactccaacgagaaaccgtacgtt
tgtaagatccccggctgtacgaagcgttacaccgacccgagctctctgaggaagcacgtg
aagacggtgcacggacccgaggctcacatcactaaaaagcaccgcggagacaccggacca
cgtcctccaggtctgaccaatgcaggccagagctctgaacttctgatagaaaaagaggag
agaagcagagaggactgcaaattactcgctccagaaaccgcactgaaatcccagccaagt
cctggcggccagtcatcctgtagtagcgaacgttctccactagggagcgccaacaacaac
gacagcggtgtggagatgaacctcaatgctgcggggagtctggaggacctgaccacacag
gaggagagcgggaacactgctgtgtccgagtcgggcggaggctcggggggaatgtgcatg
tccgttcaggccttgaagagcttggagaacctgaagatcgacaaactgaagcagattcgc
cggccaacacctcctgggcggagcgcagggaataaacaaccgcacctttcaacaacagga
gagatgatgggcatgtgtgcgccttcacccttgctctccaaccggcgtgtaatggagctt
tctgccccggatctggccggagttagtggaatgggaatgccctgcaccaaacganccggc
agcggcaccagcagcctcagctctgcctacacagtaagccgccgttcgtctatggtctcg
ccctacctatcaagcagacgctccagcgacgtgtcccaagtgggtcactgccagtccgta
atggggaccgatgttcccggcgacccactgtctcctcagaacagcaaaagaggcggatct
tgccagaacctcggggggttgccaggtctaccgagtctgactcctgcgcagcagtatagt
ctgaaagctaaatatgcagcagcaacaggcggcccaccgccaaccccgttacccaacatg
gaccaacctggcaaccctggaagattcctgagagaatgccatggccaacctattcctccg
tttctgcagcaaggtggcacaaggaggcacagtgctaataccgaatacggcacgggagtg
atctatccacatcaggcacctgggaacaacatgaggcgcgccagcgatccagtacgctct
ggtgccgacccgcagggtttacccaaggtgcaacgctttaatagcttaagcaacgtgtcc
cttatgagtcgccgcaatgcactgcagcagtgcggatctgatgcccctctcagcaggcac
atgtactcgcctcgtccaccgagcatcactgaaaatgtcatgatggaggctatggccatg
gatcctcatgggaccgccgaaggcagagagcaaggcaacatgatccaaggcggagaccga
gcctacatgggctaccagcaacctcaacaatgcaaccaccctcacaatgctagtcaacta
tctcccagacaagaaggactgagttgcatggatcaagtctaccagcctcaaatgcaaggt
ccgtaccagcgtgaggagatctgtgccaccgggataatgggtcagggtgacatcgcaaac
aatcttctacagcaagctgagttcggcatgagcaactgtcagcttagccctccanngtcc
aattatcccagccagggtgatggatcaggaccctggggacagaccaaccagctccacagc
cctcagaccgatatgcagtaccagtgtgcaggcatgcaaggacaacactaccctcaacag
agcgtatacgaccctacatctaaccctggccatcaaagagttactgtaaaaccagagcag
ttccattcatccatgggaggatcaagttcctgccagaacactaaacctctacaccagcat
cgcagggtgaatatgcaggcgtatccaccgcagtcaggtcagggcatcatgggtaggtcc
tccaatgcaaactgtgacttccatcacggccagatgagaacacaagtcggtcttccgcag
cagagccaggcgggatcgttcccaagtggtggagggataaatcttgcactagcggagagc
cgtaggtcgcagatgccgatgcatcagatgaaggaaatgatggtgaggaattatgtgcag
tcccagcaagcactcctttgggaacagcagcaggagcaaacggtactcgatggtctctct
gggaagcccgatggcatggaaatgggaggacatccgcaagctaaccagaatctttatcct
ggtaactctttccaaggctacccaaatcagaacttgatgagcccaccacaaaatcgagtt
cccggttccatcaaggagcataccgctgggatgcagggatcctgctatgggccggatatg
gtgccacgaccacctcagggacgaaagcctcttagtcgccaaaacagcctatcccagcag
acaggtggagcttacctgggcagcccgactcaccgaccggtccactccaccgccagtccc
agaagagcagtccgtctcccaccggttcaacaacagcagcagcattcagaaaacttcacc
aataacaacaacaaccccatgtactactcaggccagatacacatgcaccacgacatagag
aagactcaggatggtccatgcctggcccagcagcacctgacagggatagaccctagtacc
aagcccacctcgatggcctactcggaccctgcacccatgtccaatgccttagaaaacctg
gacttggagaacgctcagattgactttacttccatcatagatgaccaagaaccttcatct
tacagtccaataaacccaccgctgggtcaccaccagtgctcctctcagacctcctcccgt
ctcaccacaccccaaacctccatcacccttccaagtggcctttccaatatggcaatcggg
gacatgacctcgatgttgacatcccttgctggggagaacaagtatttgaacacattgtct
taa
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integrated database retrieval system
