KEGG   Cyprinus carpio (common carp): 109095179
Entry
109095179         CDS       T05134                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1-like isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03020  RNA polymerase
ccar03420  Nucleotide excision repair
ccar04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109095179
  09124 Replication and repair
   03420 Nucleotide excision repair
    109095179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccar03021]
    109095179
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109095179
Transcription machinery [BR:ccar03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109095179
  RNA polymerase III system
   RNA polymerase III
     109095179
  RNA polymerase I system
   RNA polymerase I
     109095179
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109095179
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 109095179
NCBI-ProteinID: XP_042569163
Ensembl: ENSCCRG00000012408
UniProt: A0A8C1QEU3
LinkDB
Position
A2:26807111..26810381
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLHEFRGQFGDRPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEETKVGIKTIKMYCQRMQEENITRAIIVVQTGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTREEVTELLARYKLKETQLPRIQSSDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgaagaagaaacttatcgattatggaaaatccgcaagaccataatgcagctg
tgccatgatcgagggtatctggtgacccaagatgagctggaccagaccttgcatgagttc
agaggtcagtttggtgacagacccagcgagggtcgccccagacggacagacctcactgtg
ctggtggcccacaatgacgaccccaccgaccagatgtttgtgttctttccagaggagacg
aaagtgggcatcaagaccattaagatgtactgccagcggatgcaggaagagaacatcacc
cgggccatcatcgtagtccagacgggcatgactccttctgctaaacagtctttggttgat
atggcaccaaaatacatcttggaacagtttctacagcaagagctgctcataaacatcacc
gagcacgagctggtccctgaacacattgttatgacgagagaggaagtgaccgagctgctg
gccagatataaactcaaggagacacagttacccagaatccagtccagtgatcccgtggca
cggtattttgggctgaaacgagggcaggtggtgaagatcatccgtcccagtgaaacggcc
ggacgctacatcacatacagactcgtacagtga

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