Cyprinus carpio (common carp): 109095417
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Entry
109095417 CDS
T05134
Symbol
si:dkey-13a21.4
Name
(RefSeq) ypt/Rab-type GTPase avaA isoform X1
KO
K07897
Ras-related protein Rab-7A
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04137
Mitophagy - animal
ccar04140
Autophagy - animal
ccar04144
Endocytosis
ccar04145
Phagosome
ccar04148
Efferocytosis
ccar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109095417 (si:dkey-13a21.4)
04145 Phagosome
109095417 (si:dkey-13a21.4)
04140 Autophagy - animal
109095417 (si:dkey-13a21.4)
04137 Mitophagy - animal
109095417 (si:dkey-13a21.4)
04148 Efferocytosis
109095417 (si:dkey-13a21.4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109095417 (si:dkey-13a21.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109095417 (si:dkey-13a21.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109095417 (si:dkey-13a21.4)
04031 GTP-binding proteins [BR:
ccar04031
]
109095417 (si:dkey-13a21.4)
Membrane trafficking [BR:
ccar04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
109095417 (si:dkey-13a21.4)
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109095417 (si:dkey-13a21.4)
Exosomal proteins of other body fluids (saliva and urine)
109095417 (si:dkey-13a21.4)
Exosomal proteins of colorectal cancer cells
109095417 (si:dkey-13a21.4)
Exosomal proteins of bladder cancer cells
109095417 (si:dkey-13a21.4)
GTP-binding proteins [BR:
ccar04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
109095417 (si:dkey-13a21.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
RsgA_GTPase
AAA_5
AAA_24
AAA_16
nSTAND3
IIGP
AAA_7
Motif
Other DBs
NCBI-GeneID:
109095417
NCBI-ProteinID:
XP_018964670
Ensembl:
ENSCCRG00000005132
UniProt:
A0A9Q9VDI5
LinkDB
All DBs
Position
B11:complement(15254909..15258003)
Genome browser
AA seq
230 aa
AA seq
DB search
MTEWSTPHLKVILIGNSGVGKSSFMSRFVHHRFTNLYRATIGVDFLTKEITIDKRSVILQ
IWDTAGTERFHSLGTTLYRGAHCCLLVFDVTSSVSFDALDIWKKEFLVQACPSDPSAFPF
IVLGNKIDLDYREALIDRCPQAKPSNGAVKLELNILNVVPRKTLAWTQLFTVRHEQPCSI
SKDTMWKMEKTSRLHRNNRRSSQIKNAIVEAKKKTAVLLFSVKARSHQGG
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgacggagtggagcacaccacacttgaaagtcattcttatcggaaactctggagtggga
aagtcttcatttatgagccggtttgtccaccatcgctttactaacttgtatcgtgccaca
atcggggtagatttccttactaaagaaatcactattgataaaagatcagtgattcttcag
atctgggacactgcaggaacagaaaggtttcactctctgggtaccacactgtatcgtgga
gctcactgctgccttctagtgtttgacgttacctcgtccgtctcctttgatgcactagac
atctggaagaaagagttcctggtgcaggcatgtccctctgacccctctgcattccctttc
atagtgcttggcaataaaattgacttggattatcgtgaggctttgattgacaggtgtccc
caagcaaagcccagcaatggtgcagtgaaattggagctgaatattttgaatgtagtgcca
aggaagacattggcgtggacacaacttttcacagtgcgacacgagcagccctgcagtatc
tcaaaagacaccatgtggaaaatggagaagacatccagattacacagaaacaacaggaga
agcagccaaataaaaaatgctattgttgaagcaaagaaaaaaactgctgtgctactcttc
agtgttaaggcccgttcacaccaaggaggataa
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integrated database retrieval system
