Cyprinus carpio (common carp): 109095451
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Entry
109095451 CDS
T05134
Symbol
rbpja
Name
(RefSeq) recombination signal binding protein for immunoglobulin kappa J region a isoform X1
KO
K06053
recombining binding protein suppressor of hairless
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109095451 (rbpja)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109095451 (rbpja)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Other transcription factors
Others
109095451 (rbpja)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
TIG
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
109095451
NCBI-ProteinID:
XP_042572673
Ensembl:
ENSCCRG00000013127
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All DBs
Position
B1:complement(16517074..16525375)
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AA seq
497 aa
AA seq
DB search
MAPVVTGKFGELPQPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCV
YLMGCGWKKKKEQMEREGCSEQDSQPCAFIGIGNSEQEMQQLNLEGKNFCTAKTLYISDS
DKRKHFMLSVKMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRL
RSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCS
VTGMALPRLVIRKVDKQTALMDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPC
PKETNKEMVNDGASWTIISTDKAEYTFYEGMGPVPSPVTPVPVVESLQLNGGGDVAMLEL
TGQNFTPNLRVWFGDVEADTMYRCGESVLCVVPDISAFREGWRWVRQPVQVPVTLVRNDG
IIYSTALTFTYTPEPGPRPHCGAAGAILRANSNSSTSPSSSSSSSSLLLQSAVDSQAGYA
ATGSVSSSSSSSAMSVS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgttgtgacagggaaatttggggagctccctcagccaaagcgtttaacaagg
gaggcaatgcgcaactacttgaaggagagaggagatcagacagtactcatactgcatgca
aaagtcgcacagaaatcgtatggcaatgaaaaaagattcttctgtcctccaccatgtgtt
tacctgatgggttgtggctggaagaaaaagaaggagcagatggaaagggagggctgctcg
gagcaggactctcagccttgtgcctttatcggcattggaaacagtgaacaagaaatgcag
cagctcaacttggagggcaagaacttttgcacagcaaaaacgttatacatttctgactcg
gacaaacggaagcacttcatgctgtcagtgaaaatgttctatgggaatagtgcggatatc
ggtgtcttcctcagcaaacgaatcaaggtcatctccaaaccttccaaaaagaaacagtcg
ctgaagaatgcagacctgtgcatagcttctgggacgaaggtggctctttttaaccgcttg
cggtcccagactgtcagtacgcggtaccttcatgtggaagggggaaacttccatgctagt
tcacaacagtggggagccttctttattcatctattggatgatgatgagtcggagggtgaa
gagtttacagtcagagatggttatatccattacggtcagacggtgaagctggtgtgctct
gtgacaggcatggctctaccccgactggtcattcgtaaagtggacaagcagactgcgcta
atggatgccgatgaccctgtgtcccaactacataaatgtgccttctaccttaaagataca
gagaggatgtatctctgcctgtcacaagagaggataattcagttccaggccacaccctgt
cccaaagaaacgaacaaagaaatggtcaacgatggggcgtcatggacaatcatcagcaca
gacaaagcagagtacactttctatgaggggatgggccctgtaccctcacctgtcacaccc
gtgcctgttgttgaaagtttacagctgaatggaggaggagatgttgccatgctggaactg
acaggacagaacttcacgcctaacctaagagtctggtttggagatgtagaggcagacaca
atgtacaggtgtggcgaaagtgtgctctgtgtggttcccgacatctctgcgttccgtgag
gggtggcgttgggttcggcagccagtgcaggttcctgtgactttggtccgtaatgatggc
atcatctactccacagctttgacttttacctacacgccagagccgggaccacgtcctcac
tgcggcgccgcaggagccatactgcgggccaacagcaactcctccacctcaccatcttct
tcctcctcatcctccagcctactgcttcagtcagccgtcgacagccaggcaggatacgca
gcaacagggagcgtgtcttcatcttcctcttcctcagctatgtctgtctcctaa
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