Cyprinus carpio (common carp): 109096045
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Entry
109096045 CDS
T05134
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04080
Neuroactive ligand-receptor interaction
ccar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109096045
04082 Neuroactive ligand signaling
109096045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109096045
Ion channels [BR:
ccar04040
]
Ligand-gated channels
GABA-A
109096045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Zip
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
109096045
NCBI-ProteinID:
XP_018965263
Ensembl:
ENSCCRG00000013590
UniProt:
A0A9Q9VDR6
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Position
B14:complement(9576423..9617878)
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AA seq
559 aa
AA seq
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MVSAKKEMVTAMYPTSISTLLYFLCVAACIKRISGQIRKDEKLYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLKYEGPVEILRLN
NLMVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRLTIIAECPMKLVDFP
MDGHSCPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETVKSIT
GEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNVQAERAKRKQAKAAA
AAATARSSTPSGKAKDTEEVLQQNSDTNGNLRKRINSNAQSQPDSKKTQRTETSSKSGAS
AASKPTLTSQSSSTSEGTSSFSSQSRLSPSSASQSNAAASSSAAKTTPPAPPSTPTVPEK
PSPSASTGSAPLHHLLGPKLENIKKKEAKVAPQPAAPPTGGASKIDEYARILFPVSFGAF
NMVYWVVYLSKDTMEAKGG
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtgactgcgatgtaccccacttctatttccactctc
ctctactttctctgtgtggcggcttgcataaagagaatatctggacagatcagaaaggat
gagaaattatatccggaaaatttcacacgcattctggaccgacttctggatggatacgac
aacagactccgacctggatttgggggtccagtgacggaagtgaagactgatatttacgtc
acaagttttggcccagtttccgacgtagagatggagtacaccatggacgtgttcttccgc
cagacgtgggtggataggcggttgaagtatgaaggcccggtggagatcctccggctaaat
aacctgatggtaaccaaagtctggacccctgacacgttctttaggaatggcaaaagatct
gtggctcacaacatgacagcacccaacagactcttccgaatcatgaagaacggcaccatc
ctgtacactatgaggttgacaatcattgcagaatgtccaatgaaactcgtcgatttcccc
atggatggtcactcctgccctctgaagttcggcagctatgcctacccaaagactgagatg
atctacacctggactaaaggaccgcagcattctgtggaggtcccacctgagtcgtccagc
ctggtacagtacgacctgatcggacagactgtgtcgagcgagactgtaaagtccatcacc
ggtgaatatgtagtaatgacggtctacttccacttgaaacggaaaatgggctacttcatg
attcagacgtacatcccctgcatcatgactgtaatcctttctcaagtgtctttctggata
aataaggaatccgtgcccgccagaactgtctttggaatcaccactgttctcacgatgacg
accctcagcatcagcgctcggcactctctgcccaaggtctcgtacgccactgccatggat
tggttcatcgccgtgtgttttgctttcgtcttctctgctctcatcgagtttgcggctgtg
aactacttcaccaacgttcaagcagagagagccaagagaaaacaggccaaagccgctgct
gccgcagccactgccaggagctccaccccgtcaggcaaagctaaagacacagaggaggtt
ctacagcaaaactcggacaccaatggaaacttacgaaaacgcatcaactccaatgcccag
tctcaaccagactccaagaaaacccaaagaaccgaaacatctagcaagagcggtgcatca
gctgcatccaaaccaaccttgaccagccaatcatcttccacctcagagggtaccagcagt
ttctccagccaatcacgtctcagccccagttccgccagccagtcaaatgcagccgcttca
tcctctgccgcaaagacaacaccgccggccccaccctctacaccaacagttcccgagaaa
ccgtcgcccagcgcatccacaggctccgcccctcttcaccatctcctcgggcctaaatta
gagaatattaaaaagaaggaagccaaggttgcacctcaacctgccgctcctccaaccgga
ggtgccagcaagatcgacgaatacgcacgtattttattcccagtgtcctttggggcattc
aacatggtgtactgggtggtttacttatccaaagacaccatggaggcaaagggaggttaa
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