KEGG   Cyprinus carpio (common carp): 109096249
Entry
109096249         CDS       T05134                                 
Name
(RefSeq) collagen alpha-1(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109096249
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109096249
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109096249
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccar04147]
    109096249
   00536 Glycosaminoglycan binding proteins [BR:ccar00536]
    109096249
Exosome [BR:ccar04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   109096249
Glycosaminoglycan binding proteins [BR:ccar00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109096249
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 109096249
NCBI-ProteinID: XP_042586817
UniProt: A0A9Q9WNT1
LinkDB
Position
B9:8582832..8645326
AA seq 1640 aa
MRLPCVTVFLLTVSLSIDKGTAKGGCSGSSCGGCDCSGVKGAKGEVGLPGLMGLVGFPGL
PGPEGPPGPMGPKGDSGEPGAPGLKGNRGPPGVAGFPGHPGIPGLPGLEGAPGPQGIPGC
NGTKGERGFDGIPGVPGVQGPPGIPGLKGVKGDPGGIIGVPIPQKGDRGLPGQPGLPGLK
GNPGQQGPNGPHGPMGHPGRPGEHGQKGEPGDKLTFEGEKGQKGEKGLTGPPGPRGTSEE
HGGLGTTIYIPGPPGEIGSKGEKGERGFCEPHQHGMKGELGPPGPIGKPGKDGQNGEKGD
RGFPGTPGFDGLKGDKGERGPPGYGGGLPGPPGPPGPPGAEGETGYSGERGDPGPPGRYI
PGPPGLPGLPGEIGQKGDKGADGLSLEGPRGSDGQPGPPGHTSQITNDCNIEKGPQGPPG
PPGLRGEIGQKGDQGETCTECTAFGQPGLPGPQGPKGQQGYPGQAGSKGEKGVTGPPGPA
GIPGQDGSPGLMGAPGSHGEPGDVFVAPGLKGERGLPGTTGDRGIPGVDGLPGKDGRPGQ
PGPKGEPARFGIKGDRGLDGDRGFPGPPGERGPPGLPGIGQPGESGEKGLAGLPGAPGRP
GLPGVKGEPGKTISLPGPQGAPGPRGETGRPGLQGDTGFPGERGVTGLPGDKGDPGLPGT
GFPGPPGPKGYSGIPGHAGIPGEPGQPGQDGLPGRAGTPGQKGEPGKGLPGPKGAIGQPG
VPGFPGEKGNPGMPGVPGTEGRTGPPGLQGIKGNPGPPGARGAVGPPGTPAVGEPGPPGP
MGPPGDPGPLGQIGIKGEKGYQGLPGLDMPGPPGDRGSPGFPGLPGSKGLPGEQGPPGRD
GFPGERGTKGEIGIMGMTGPPGPSGPVGNPGEPGPKGDPGLTGVRGVFGDPGPKGERGDQ
GLQGPPGNMSDVDMGHLKGEKGDIGERGDPGPTGEKGFTGMPGDPGMQGKDGMPGSSGKP
GEKGDPGVPGVPGQTGEPGDPGQRGDMGFPGSMGPKGIKGVGGSPGHPGSKGSDGPKGDK
GEPGAAGIGIPGPPGEKGNVGQPGFPGDLGQKGQKGTMGIPGTPGTQGPKGDTGLIGYPG
SPGKPGEKGVSGLPGSPGEPGFQGRPGEPGLQGPPGQPGEKGEPGVDGIPGFVGERGEPG
IPGKGLPGTLGEPGSKGDKGNPGLPGIPGSPGIPGTKGEKGLPGFPGDQGQPGEKGLPGS
SMEGPKGDRGAQGLPGEKGVIGEPGTPGIPGTAGAKGEKGDVGFPGPQGSQGYKGDKGFT
GTPGEPGLPGYNGPKGEMGPQGVPGFPGIKGEQGVIGPKGDEGDRGFPGLKGIEGPPGPP
GPHTFIKGDPGFPGPQGPPGLVGIQGFPGPKGQQGVMGLQGIKGSDGTPGYNGHPGAKGE
PGQTGPSGPRGYPGPPGPSGFPGGIGLPGPASMDHGFLVTRHSQSVDVPQCPEGTTLIYD
GYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPM
PMSMAPVTGESIKPFISRCAVCEAPAMVIAVHSQTILIPACPRGWDSLWIGYSFIMHTSA
GAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEDNEMFSKPVPTT
LKAGNLRTHISRCQVCMKRV
NT seq 4923 nt   +upstreamnt  +downstreamnt
atgcggcttccatgtgtcaccgtttttcttctcacagtctctttgagcatagacaagggt
acagctaagggtggatgctcagggtcttcatgtggtggatgtgactgcagtggtgttaaa
ggggcgaagggtgaggttgggctccctggtttgatgggcctcgtgggatttcctggatta
ccagggcctgagggccccccagggccaatgggaccaaagggagattcaggggagccagga
gctccaggacttaaaggaaacagaggcccacccggtgtggctggtttcccaggacatcca
ggtattccaggtcttccaggtctagaaggtgcaccaggacctcaaggaatcccaggctgc
aatggaacaaagggggagcgtggttttgatggaattccaggggttccgggagtgcaggga
ccaccgggtattccaggtttgaagggagtaaagggagatcctggtggtattattggagta
cccattcctcaaaaaggagacaggggcttgccaggacaacctggtttaccaggactaaaa
ggtaatcctggacaacaagggccaaacggcccacatggaccaatgggacatcctggaagg
cctggtgaacatggccaaaaaggagagccgggtgacaagctgacgtttgagggtgagaaa
ggacaaaagggagaaaaaggtttaaccggtccccccggtccacgagggacatcagaggaa
catggaggccttggcacaacaatttatattcctggaccaccgggtgaaataggctctaaa
ggagagaaaggggaaaggggtttttgtgaaccacatcaacatggaatgaaaggtgaacta
ggaccaccagggccaatcgggaaaccagggaaggatggacagaatggagaaaagggggat
cggggcttccctggtactcctggatttgatggcttaaagggggacaaaggagaaagagga
ccaccaggatatggtggtggtcttcctggccctcctggtcctcctggcccccctggagca
gaaggagagacaggttattcaggagaacgtggagatcctggtcccccaggccggtatatt
cctggtcctcctggacttcctggcctccctggagagattggccagaagggagataaagga
gctgatggactgtctcttgaaggtccaagaggatctgatggacaacctggcccccctgga
cacacatcacaaataaccaatgactgtaatattgaaaaaggacctcaaggcccccctgga
cctcctgggttgcgaggagagattggacagaaaggtgatcaaggtgaaacatgcacagag
tgcactgcttttgggcaaccaggtttacctggtcctcaagggccaaagggtcagcaaggt
tatcctggacaagcggggagtaaaggagagaagggtgtgacaggacctcctgggcctgct
ggaattcctggtcaagatggctctccaggtttaatgggtgcccctggctctcacggtgag
cctggtgatgtctttgttgctccagggctgaaaggagaacggggtttacctggtactact
ggagacagagggattccaggtgttgatgggttaccaggaaaagatggtcggccagggcaa
cctggaccaaagggagagcctgctagatttggtattaagggtgatcgtggcctggatgga
gatcgtggttttcccggtcctccgggtgagagaggtcccccaggtcttccaggcataggt
cagccaggtgaatctggtgaaaaaggcttagcaggtttgcctggtgcaccaggaaggcca
ggattaccaggagttaaaggtgaacctggtaaaactataagtttacctggacctcagggt
gccccaggacctcgtggagagactggcagacctggacttcaaggtgacacaggttttcca
ggtgaacgtggagttacaggattaccaggagacaaaggtgaccctggactgccaggaacc
ggctttcctgggcccccaggaccaaaaggatactctgggattccaggtcatgctgggatt
ccaggagagcctggtcaaccaggtcaggatggcttgcctggtcgtgcagggacacctggg
caaaaaggtgaacctggcaagggtcttcctggtcctaaaggtgccataggtcagccagga
gtgccaggatttccaggggagaagggtaatcctggaatgccaggggttcctggaactgag
ggacgtactgggccacctggactacagggaatcaaaggtaatcctggaccacctggagct
cgtggtgcagtggggccaccaggtactccagcggttggagaacctggaccacctggacca
atggggccacctggagaccctggaccccttggtcagatcggtataaagggtgagaaaggt
tatcaaggcctacctggtttagacatgcctggccctccaggagacaggggtagccctggt
ttcccaggtttaccaggatctaagggtttgccaggagaacaaggacctccaggaagagat
ggcttccctggtgaacgtggtacaaaaggagaaattggaatcatgggaatgacaggaccc
cctggaccttcaggtcctgttggaaaccctggagagccaggaccaaaaggtgaccctggt
ttgactggggtcaggggagtgtttggtgatccaggtcccaagggtgagagaggagatcag
ggtctacaggggccacctggaaacatgagtgatgttgacatgggacacttgaaaggggag
aaaggagacatcggagagagaggtgatcctggtcctaccggagaaaagggatttactgga
atgcctggagaccctggaatgcaaggaaaagatggaatgccaggttcatctggaaagcca
ggtgaaaaaggagaccctggagtccccggggtgccaggacaaactggagaacctggagac
ccaggtcaaagaggagacatgggattcccaggttcaatggggccaaaaggtattaaaggt
gttggtgggtcaccgggtcaccctggatccaagggttctgatggccccaaaggagataaa
ggagagcctggtgctgcaggaataggcatacctggtccccctggagagaagggaaatgtt
ggtcaacctggtttccctggtgaccttggacagaagggacagaagggtacaatgggcatc
cctggaactcctggaactcaaggacctaaaggagacacaggattgattggttatccagga
agcccagggaaaccaggtgagaaaggtgtcagtgggctgccagggtctccaggagaacct
gggtttcaaggacgtccaggtgagcctggtctacagggtccaccaggtcaacctggggag
aaaggcgaaccaggagtagatggcattccaggatttgtaggagagagaggagaacctggt
atacctggtaaaggtttgccaggaacccttggagaacctggcagcaaaggtgacaaaggt
aaccctggtcttcctggcattcctgggagtccaggtattcctggaaccaaaggtgagaag
ggtctgccaggattcccaggggaccaagggcagcctggagagaaaggacttccaggatca
tccatggaggggcctaaaggggaccggggagctcagggactgccaggagaaaaaggtgtg
attggggaaccaggcacacctggcatacctggcactgctggagctaaaggagaaaaggga
gatgttggcttccctggcccacaaggttctcaagggtataaaggagacaaaggtttcact
ggtactcctggtgagcctggattgcctggttataatggaccaaagggtgagatgggacca
cagggtgttcctggtttccctggtataaagggtgagcaaggagtgatcggtcctaagggt
gacgaaggtgacagaggatttccaggtcttaaaggtatcgaaggcccccctggaccccct
gggccgcacacatttataaagggagatcctggttttccaggacctcagggtcccccgggt
ctagttggaattcaaggcttccctggaccgaaaggacaacagggtgtgatgggacttcag
ggtataaaaggatccgatggaacacctggctataatggacatcctggggccaaaggagag
cctggacaaactggaccctctggccccagagggtaccctggacctccaggacctagtggt
ttcccaggtggcatcggccttcctggccctgcctcaatggaccacggcttccttgtaacc
cgccacagtcagagtgttgatgttccacaatgtccagagggaacaacgctgatctatgat
ggatattcgctgctttatgtccagggcaacgagaggtcacatggacaagacctaggtaca
gctggtagctgcctaaggaagttcagcccaatgcctttcctcttctgcaacatcaacaat
gtatgtaactttgcttctcgtaatgactattcctactggctcacctctcccgagcccatg
cccatgagcatggcccctgttaccggtgagagcatcaaacccttcatcagcagatgtgca
gtttgtgaggctcctgctatggtgatagctgtgcacagtcagactatcctgatccctgcc
tgccctcgtggttgggattctctctggattggatactctttcatcatgcacaccagtgct
ggtgctgagggctccggtcaggctctggcctctccgggttcttgtctggaagagttccgt
tcggcacccttcatcgagtgtcacggtcgcggcacctgcaactattacgctaactcctac
agcttctggttagccaccgtagaggacaatgaaatgtttagcaaacctgtccctacaacg
ctaaaggctggaaatctacgaactcacatcagcaggtgtcaagtgtgcatgaagagggta
tag

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