Cyprinus carpio (common carp): 109096249
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Entry
109096249 CDS
T05134
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109096249
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109096249
09142 Cell motility
04820 Cytoskeleton in muscle cells
109096249
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109096249
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109096249
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109096249
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109096249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109096249
NCBI-ProteinID:
XP_042586817
UniProt:
A0A9Q9WNT1
LinkDB
All DBs
Position
B9:8582832..8645326
Genome browser
AA seq
1640 aa
AA seq
DB search
MRLPCVTVFLLTVSLSIDKGTAKGGCSGSSCGGCDCSGVKGAKGEVGLPGLMGLVGFPGL
PGPEGPPGPMGPKGDSGEPGAPGLKGNRGPPGVAGFPGHPGIPGLPGLEGAPGPQGIPGC
NGTKGERGFDGIPGVPGVQGPPGIPGLKGVKGDPGGIIGVPIPQKGDRGLPGQPGLPGLK
GNPGQQGPNGPHGPMGHPGRPGEHGQKGEPGDKLTFEGEKGQKGEKGLTGPPGPRGTSEE
HGGLGTTIYIPGPPGEIGSKGEKGERGFCEPHQHGMKGELGPPGPIGKPGKDGQNGEKGD
RGFPGTPGFDGLKGDKGERGPPGYGGGLPGPPGPPGPPGAEGETGYSGERGDPGPPGRYI
PGPPGLPGLPGEIGQKGDKGADGLSLEGPRGSDGQPGPPGHTSQITNDCNIEKGPQGPPG
PPGLRGEIGQKGDQGETCTECTAFGQPGLPGPQGPKGQQGYPGQAGSKGEKGVTGPPGPA
GIPGQDGSPGLMGAPGSHGEPGDVFVAPGLKGERGLPGTTGDRGIPGVDGLPGKDGRPGQ
PGPKGEPARFGIKGDRGLDGDRGFPGPPGERGPPGLPGIGQPGESGEKGLAGLPGAPGRP
GLPGVKGEPGKTISLPGPQGAPGPRGETGRPGLQGDTGFPGERGVTGLPGDKGDPGLPGT
GFPGPPGPKGYSGIPGHAGIPGEPGQPGQDGLPGRAGTPGQKGEPGKGLPGPKGAIGQPG
VPGFPGEKGNPGMPGVPGTEGRTGPPGLQGIKGNPGPPGARGAVGPPGTPAVGEPGPPGP
MGPPGDPGPLGQIGIKGEKGYQGLPGLDMPGPPGDRGSPGFPGLPGSKGLPGEQGPPGRD
GFPGERGTKGEIGIMGMTGPPGPSGPVGNPGEPGPKGDPGLTGVRGVFGDPGPKGERGDQ
GLQGPPGNMSDVDMGHLKGEKGDIGERGDPGPTGEKGFTGMPGDPGMQGKDGMPGSSGKP
GEKGDPGVPGVPGQTGEPGDPGQRGDMGFPGSMGPKGIKGVGGSPGHPGSKGSDGPKGDK
GEPGAAGIGIPGPPGEKGNVGQPGFPGDLGQKGQKGTMGIPGTPGTQGPKGDTGLIGYPG
SPGKPGEKGVSGLPGSPGEPGFQGRPGEPGLQGPPGQPGEKGEPGVDGIPGFVGERGEPG
IPGKGLPGTLGEPGSKGDKGNPGLPGIPGSPGIPGTKGEKGLPGFPGDQGQPGEKGLPGS
SMEGPKGDRGAQGLPGEKGVIGEPGTPGIPGTAGAKGEKGDVGFPGPQGSQGYKGDKGFT
GTPGEPGLPGYNGPKGEMGPQGVPGFPGIKGEQGVIGPKGDEGDRGFPGLKGIEGPPGPP
GPHTFIKGDPGFPGPQGPPGLVGIQGFPGPKGQQGVMGLQGIKGSDGTPGYNGHPGAKGE
PGQTGPSGPRGYPGPPGPSGFPGGIGLPGPASMDHGFLVTRHSQSVDVPQCPEGTTLIYD
GYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPM
PMSMAPVTGESIKPFISRCAVCEAPAMVIAVHSQTILIPACPRGWDSLWIGYSFIMHTSA
GAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEDNEMFSKPVPTT
LKAGNLRTHISRCQVCMKRV
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttccatgtgtcaccgtttttcttctcacagtctctttgagcatagacaagggt
acagctaagggtggatgctcagggtcttcatgtggtggatgtgactgcagtggtgttaaa
ggggcgaagggtgaggttgggctccctggtttgatgggcctcgtgggatttcctggatta
ccagggcctgagggccccccagggccaatgggaccaaagggagattcaggggagccagga
gctccaggacttaaaggaaacagaggcccacccggtgtggctggtttcccaggacatcca
ggtattccaggtcttccaggtctagaaggtgcaccaggacctcaaggaatcccaggctgc
aatggaacaaagggggagcgtggttttgatggaattccaggggttccgggagtgcaggga
ccaccgggtattccaggtttgaagggagtaaagggagatcctggtggtattattggagta
cccattcctcaaaaaggagacaggggcttgccaggacaacctggtttaccaggactaaaa
ggtaatcctggacaacaagggccaaacggcccacatggaccaatgggacatcctggaagg
cctggtgaacatggccaaaaaggagagccgggtgacaagctgacgtttgagggtgagaaa
ggacaaaagggagaaaaaggtttaaccggtccccccggtccacgagggacatcagaggaa
catggaggccttggcacaacaatttatattcctggaccaccgggtgaaataggctctaaa
ggagagaaaggggaaaggggtttttgtgaaccacatcaacatggaatgaaaggtgaacta
ggaccaccagggccaatcgggaaaccagggaaggatggacagaatggagaaaagggggat
cggggcttccctggtactcctggatttgatggcttaaagggggacaaaggagaaagagga
ccaccaggatatggtggtggtcttcctggccctcctggtcctcctggcccccctggagca
gaaggagagacaggttattcaggagaacgtggagatcctggtcccccaggccggtatatt
cctggtcctcctggacttcctggcctccctggagagattggccagaagggagataaagga
gctgatggactgtctcttgaaggtccaagaggatctgatggacaacctggcccccctgga
cacacatcacaaataaccaatgactgtaatattgaaaaaggacctcaaggcccccctgga
cctcctgggttgcgaggagagattggacagaaaggtgatcaaggtgaaacatgcacagag
tgcactgcttttgggcaaccaggtttacctggtcctcaagggccaaagggtcagcaaggt
tatcctggacaagcggggagtaaaggagagaagggtgtgacaggacctcctgggcctgct
ggaattcctggtcaagatggctctccaggtttaatgggtgcccctggctctcacggtgag
cctggtgatgtctttgttgctccagggctgaaaggagaacggggtttacctggtactact
ggagacagagggattccaggtgttgatgggttaccaggaaaagatggtcggccagggcaa
cctggaccaaagggagagcctgctagatttggtattaagggtgatcgtggcctggatgga
gatcgtggttttcccggtcctccgggtgagagaggtcccccaggtcttccaggcataggt
cagccaggtgaatctggtgaaaaaggcttagcaggtttgcctggtgcaccaggaaggcca
ggattaccaggagttaaaggtgaacctggtaaaactataagtttacctggacctcagggt
gccccaggacctcgtggagagactggcagacctggacttcaaggtgacacaggttttcca
ggtgaacgtggagttacaggattaccaggagacaaaggtgaccctggactgccaggaacc
ggctttcctgggcccccaggaccaaaaggatactctgggattccaggtcatgctgggatt
ccaggagagcctggtcaaccaggtcaggatggcttgcctggtcgtgcagggacacctggg
caaaaaggtgaacctggcaagggtcttcctggtcctaaaggtgccataggtcagccagga
gtgccaggatttccaggggagaagggtaatcctggaatgccaggggttcctggaactgag
ggacgtactgggccacctggactacagggaatcaaaggtaatcctggaccacctggagct
cgtggtgcagtggggccaccaggtactccagcggttggagaacctggaccacctggacca
atggggccacctggagaccctggaccccttggtcagatcggtataaagggtgagaaaggt
tatcaaggcctacctggtttagacatgcctggccctccaggagacaggggtagccctggt
ttcccaggtttaccaggatctaagggtttgccaggagaacaaggacctccaggaagagat
ggcttccctggtgaacgtggtacaaaaggagaaattggaatcatgggaatgacaggaccc
cctggaccttcaggtcctgttggaaaccctggagagccaggaccaaaaggtgaccctggt
ttgactggggtcaggggagtgtttggtgatccaggtcccaagggtgagagaggagatcag
ggtctacaggggccacctggaaacatgagtgatgttgacatgggacacttgaaaggggag
aaaggagacatcggagagagaggtgatcctggtcctaccggagaaaagggatttactgga
atgcctggagaccctggaatgcaaggaaaagatggaatgccaggttcatctggaaagcca
ggtgaaaaaggagaccctggagtccccggggtgccaggacaaactggagaacctggagac
ccaggtcaaagaggagacatgggattcccaggttcaatggggccaaaaggtattaaaggt
gttggtgggtcaccgggtcaccctggatccaagggttctgatggccccaaaggagataaa
ggagagcctggtgctgcaggaataggcatacctggtccccctggagagaagggaaatgtt
ggtcaacctggtttccctggtgaccttggacagaagggacagaagggtacaatgggcatc
cctggaactcctggaactcaaggacctaaaggagacacaggattgattggttatccagga
agcccagggaaaccaggtgagaaaggtgtcagtgggctgccagggtctccaggagaacct
gggtttcaaggacgtccaggtgagcctggtctacagggtccaccaggtcaacctggggag
aaaggcgaaccaggagtagatggcattccaggatttgtaggagagagaggagaacctggt
atacctggtaaaggtttgccaggaacccttggagaacctggcagcaaaggtgacaaaggt
aaccctggtcttcctggcattcctgggagtccaggtattcctggaaccaaaggtgagaag
ggtctgccaggattcccaggggaccaagggcagcctggagagaaaggacttccaggatca
tccatggaggggcctaaaggggaccggggagctcagggactgccaggagaaaaaggtgtg
attggggaaccaggcacacctggcatacctggcactgctggagctaaaggagaaaaggga
gatgttggcttccctggcccacaaggttctcaagggtataaaggagacaaaggtttcact
ggtactcctggtgagcctggattgcctggttataatggaccaaagggtgagatgggacca
cagggtgttcctggtttccctggtataaagggtgagcaaggagtgatcggtcctaagggt
gacgaaggtgacagaggatttccaggtcttaaaggtatcgaaggcccccctggaccccct
gggccgcacacatttataaagggagatcctggttttccaggacctcagggtcccccgggt
ctagttggaattcaaggcttccctggaccgaaaggacaacagggtgtgatgggacttcag
ggtataaaaggatccgatggaacacctggctataatggacatcctggggccaaaggagag
cctggacaaactggaccctctggccccagagggtaccctggacctccaggacctagtggt
ttcccaggtggcatcggccttcctggccctgcctcaatggaccacggcttccttgtaacc
cgccacagtcagagtgttgatgttccacaatgtccagagggaacaacgctgatctatgat
ggatattcgctgctttatgtccagggcaacgagaggtcacatggacaagacctaggtaca
gctggtagctgcctaaggaagttcagcccaatgcctttcctcttctgcaacatcaacaat
gtatgtaactttgcttctcgtaatgactattcctactggctcacctctcccgagcccatg
cccatgagcatggcccctgttaccggtgagagcatcaaacccttcatcagcagatgtgca
gtttgtgaggctcctgctatggtgatagctgtgcacagtcagactatcctgatccctgcc
tgccctcgtggttgggattctctctggattggatactctttcatcatgcacaccagtgct
ggtgctgagggctccggtcaggctctggcctctccgggttcttgtctggaagagttccgt
tcggcacccttcatcgagtgtcacggtcgcggcacctgcaactattacgctaactcctac
agcttctggttagccaccgtagaggacaatgaaatgtttagcaaacctgtccctacaacg
ctaaaggctggaaatctacgaactcacatcagcaggtgtcaagtgtgcatgaagagggta
tag
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