Cyprinus carpio (common carp): 109096367
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Entry
109096367 CDS
T05134
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109096367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109096367
03021 Transcription machinery [BR:
ccar03021
]
109096367
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109096367
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
109096367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Motif
Other DBs
NCBI-GeneID:
109096367
NCBI-ProteinID:
XP_042619953
Ensembl:
ENSCCRG00000014045
UniProt:
A0A9Q9YGU9
LinkDB
All DBs
Position
A9:19664208..19678247
Genome browser
AA seq
701 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNPSETSKCAMESGDESTGAQTNGLDFHRQTVQTTSAITNA
HAQALLQQLTFTPAQQQLLLQQAQAQLLAAAVQHSAGQQSNTTGASISASAATPITLSQP
IQITPQLQQLQQQQNLNLQQFVLVQPGHPIATQLQPAQFIISQTPQGQQSLLQAQNLLTQ
LPQSQANLLQTQPSITLATQPATPTRTIAATPIQSLPHSQTTPKHIDTPSLEEPSDLEEL
EQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEK
WLNDAVRAVCAENQTSDQALSSPSSLGSPGLGLEGLNRRRKKRTSIETNIRVALEKSFLE
QNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGSAISTPIKAIFSPTTP
LALSTASLVTSNTPTTITVNPVMPLTSTSVSSIGFTGTTIGSATTNTASVISTAPVVTTA
ASSPSISPSPTAAQTSSSEQASAQEMVTAVSQAPCSLATTLCTGQVMVASPSLTAALQGA
GQLPTSASIAAMAAAAGLNPGLMASSQFSPGGALLSLAPGGLGSALSPALMSNSTLATIQ
GVWSALASSGTLPITSLDGSGNFLFANTCAGSTPNLVTAPLFLNPQNLSLLASNPVSLVS
AGGAAGAAGALNLHITADAHQSAVTTATMPASTITTASKAQ
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatccatcggaaacaagtaaatgtgcaatggagagcggggacgaaagcactggtgcccaa
acaaatggactggactttcacaggcagactgtgcaaacaacaagcgcaatcaccaacgca
cacgcacaggccttgctccaacagttgacttttactccagcgcagcagcagttattgctg
cagcaggctcaggctcagctcttagcagcagcggtgcagcattcagccggccagcagagc
aacactacaggagccagcatctctgcctctgctgccacccccatcaccctctcccaaccc
atccagatcacacctcaattacagcagctgcaacagcagcagaacctcaacctgcagcag
tttgtgctggtccagccgggccaccccattgcaacacagctgcagccggcgcagttcatc
atctcgcagacaccacagggccagcagagtctcctgcaggcccagaaccttctaactcaa
ctacctcaaagccaagccaacctcctgcagacccaaccaagcatcacacttgccacacag
cctgctacacccacacgcacgatagcagcgacccccatccaatcccttcctcacagccag
acgacaccaaagcacatcgacacacccagcctggaggagcccagcgacctggaggagcta
gagcagtttgccaagaccttcaaacagagacgcatcaaactgggcttcacgcagggggat
gttggccttgccatgggaaaactttatggaaatgactttagccagaccaccatttctcgc
tttgaggccttgaacctgagctttaaaaacatgtgcaaactaaagcctctgcttgaaaaa
tggctcaatgatgcagtgcgcgctgtttgtgcagagaaccagacgtctgaccaggccctg
tccagtcccagctctcttggctcgcctgggctgggcttggagggcctgaaccgccgccgc
aagaagaggaccagcattgagaccaacatcagagtggccttagaaaagagctttctggag
cagaaccaaaaacctacctctgaggagatcaccatgattgcggaccagctcaacatggag
aaggaggtgatccgagtgtggttctgtaaccgcagacagaaagagaagaggatcaaccca
cccagcagtggcagtgccatcagcactcctatcaaagcaatcttctctcccaccacacct
ctggcactgagtacagcaagtcttgtgaccagtaacacaccgactacgattactgtaaac
ccagttatgcctctcaccagcaccagtgtctccagcatcggttttactggcacaactatt
ggctcagctaccactaacactgcatcggtcatctccactgcacctgtggtcaccacggca
gcatcctctccttccatcagcccttcccccaccgcagcacagacgtcctcctcagagcag
gcttcagctcaggagatggtgacggcagtaagtcaggcaccttgctccttggcgacaact
ctgtgcactgggcaggtgatggtggcgtcgcccagcctcacagccgctctgcaaggagcc
ggccagctgcccaccagcgccagcatcgctgccatggctgcagccgcaggcctcaatcct
ggcctcatggcgtcctctcagttctctcctggcggcgctcttctaagtttggcacctggt
ggtcttggaagcgctttgagtccagcactgatgagcaacagcaccttggccacaatccaa
ggtgtgtggagcgctctggcatctagtggcactctgcccattacatctctggacgggagc
gggaactttctgtttgccaacacctgcgctggcagtacccctaaccttgtgacggcaccg
ctctttttgaaccctcagaacttgtcactgcttgccagtaacccggtcagcttagtgtct
gcgggaggggccgcgggtgccgccggagccctcaacctgcacatcaccgccgatgcccac
cagagcgctgttaccacagcaactatgcccgcctccaccatcaccacggcctctaaggcc
cagtaa
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integrated database retrieval system
