KEGG   Cyprinus carpio (common carp): 109096435
Entry
109096435         CDS       T05134                                 
Name
(RefSeq) netrin-1 isoform X1
  KO
K06843  netrin 1
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    109096435
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ccar00536]
    109096435
Glycosaminoglycan binding proteins [BR:ccar00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   109096435
SSDB
Motif
Pfam: Laminin_N NTR EGF_laminin EGF_LMN_ATRN BNR_6
Other DBs
NCBI-GeneID: 109096435
NCBI-ProteinID: XP_042614094
LinkDB
Position
A6
AA seq 603 aa
MLRVSDALVTLVTLYCVFKGTVGGYGMSMFAAQTSPPDPCYDENGHPRRCIPDFVNAAFG
KEVRASSTCGKTPSRYCVVTEKGDERHRNCHTCDASDPKKYHPPAYLTDLNNPHNLTCWQ
SDNYIQYPQNVTLTLSLDKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQYYSTQC
RKMYNKPSKATITKQNEQEAICTDSHTDMHPLSGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDRDGS
LVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSG
RKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRKACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPIAPPTTTASSTVGPSDCESYCKASKG
KLKINMKKYCKKDYAVQVHILKAEKAGEWWKFTVNIISVYKQGESRIRRGDQFLWVRAKD
VACKCPKIKPGKKYLLLGNDEDSPGQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKC
KKA
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgttgagggtctcggatgctttggtcactttggtgactctctactgtgtattcaaaggg
actgtcggcggatacggcatgagcatgttcgccgctcagacttccccaccggatccgtgt
tacgacgagaacggtcaccccagaagatgcatccccgatttcgtgaacgcggcgttcggg
aaggaagtgcgcgcgtccagcacctgcggcaaaacaccgagtaggtattgtgtggtgact
gagaaaggggatgaaaggcacagaaactgccacacgtgcgacgcgtcggacccaaagaaa
tatcacccacctgcttacctgaccgacctgaacaatcctcataatctcacctgctggcag
tcggacaattacatccagtatcctcaaaacgtcactttaacattatccctggacaagaaa
ttcgaggttacctacgtgagtttgcagttctgctcaccaagaccagagtctatggctatc
tttaaatcaatggactacggaaagtcttgggtgcctttccagtactactcgacccagtgt
agaaagatgtacaacaagcccagcaaagccacgatcactaagcaaaacgagcaagaggcc
atctgcacagattcgcacaccgacatgcaccctctctccggcgggttgatcgcgttcagc
accctggacgggcgaccctccgcgcacgactttgacaattcacccgtacttcaggactgg
gtgactgccactgacattaaggtgactttcagccgactgcacactttcggagacgaaaat
gaggatgactcggagctggccagagattcttatttttacgccgtgtcagacctgcaggtc
ggaggcagatgtaagtgtaatggacacgcatcacggtgcgtcaaagaccgggatggaagc
ctagtgtgcgagtgcaagcacaatacagccggaccagagtgtgacagatgcaaacctttt
cactatgaccgaccctggcagcgcgcaaccgccagagaagccaacgagtgtgtcgcctgc
aattgtaaccttcatgcgaggcgctgtcgtttcaacatggagctttacaaactctccggg
aggaaaagcggaggagtctgtctgaactgccgccacaatacggcaggtcgccactgccac
tactgcaaggagggctactacagagacatgtctaagcccatctctcacagaaaggcctgc
aaagcctgtgattgccatcctgtgggggccgcgggcaaaacctgtaaccaaaccacaggc
caatgcccctgtaaagacggtgtgacgggtatcacatgcaaccgttgtgctaaaggctac
cagcagagccgatcacctattgccccctgcataaaaattcctattgctccaccaactacc
actgcaagcagcacagtgggaccttcagactgtgaatcctactgcaaggcttccaaagga
aagctgaagatcaatatgaagaagtactgcaagaaagattacgctgttcaggtccacatc
ctaaaggcagaaaaagccggcgagtggtggaagttcaccgtcaacatcatctctgtctac
aaacagggtgaaagccgaatccgcagaggagatcagtttttgtgggtcagagcaaaggat
gtagcctgcaagtgcccgaagatcaagcccggaaaaaagtacctgctgctaggcaacgat
gaggattcccctggacagagcggtgtggtggcagacaagggcagtctggtcattcagtgg
agggacacttgggctcgaagactacggaagtttcagcagcgggagaagaaaggaaaatgc
aagaaagcatag

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