Cyprinus carpio (common carp): 109096435
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Entry
109096435 CDS
T05134
Name
(RefSeq) netrin-1 isoform X1
KO
K06843
netrin 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109096435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109096435
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Axon guidance molecules
109096435
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GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
109096435
NCBI-ProteinID:
XP_042614094
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Position
A6
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AA seq
603 aa
AA seq
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MLRVSDALVTLVTLYCVFKGTVGGYGMSMFAAQTSPPDPCYDENGHPRRCIPDFVNAAFG
KEVRASSTCGKTPSRYCVVTEKGDERHRNCHTCDASDPKKYHPPAYLTDLNNPHNLTCWQ
SDNYIQYPQNVTLTLSLDKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQYYSTQC
RKMYNKPSKATITKQNEQEAICTDSHTDMHPLSGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDRDGS
LVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSG
RKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRKACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPIAPPTTTASSTVGPSDCESYCKASKG
KLKINMKKYCKKDYAVQVHILKAEKAGEWWKFTVNIISVYKQGESRIRRGDQFLWVRAKD
VACKCPKIKPGKKYLLLGNDEDSPGQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKC
KKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttgagggtctcggatgctttggtcactttggtgactctctactgtgtattcaaaggg
actgtcggcggatacggcatgagcatgttcgccgctcagacttccccaccggatccgtgt
tacgacgagaacggtcaccccagaagatgcatccccgatttcgtgaacgcggcgttcggg
aaggaagtgcgcgcgtccagcacctgcggcaaaacaccgagtaggtattgtgtggtgact
gagaaaggggatgaaaggcacagaaactgccacacgtgcgacgcgtcggacccaaagaaa
tatcacccacctgcttacctgaccgacctgaacaatcctcataatctcacctgctggcag
tcggacaattacatccagtatcctcaaaacgtcactttaacattatccctggacaagaaa
ttcgaggttacctacgtgagtttgcagttctgctcaccaagaccagagtctatggctatc
tttaaatcaatggactacggaaagtcttgggtgcctttccagtactactcgacccagtgt
agaaagatgtacaacaagcccagcaaagccacgatcactaagcaaaacgagcaagaggcc
atctgcacagattcgcacaccgacatgcaccctctctccggcgggttgatcgcgttcagc
accctggacgggcgaccctccgcgcacgactttgacaattcacccgtacttcaggactgg
gtgactgccactgacattaaggtgactttcagccgactgcacactttcggagacgaaaat
gaggatgactcggagctggccagagattcttatttttacgccgtgtcagacctgcaggtc
ggaggcagatgtaagtgtaatggacacgcatcacggtgcgtcaaagaccgggatggaagc
ctagtgtgcgagtgcaagcacaatacagccggaccagagtgtgacagatgcaaacctttt
cactatgaccgaccctggcagcgcgcaaccgccagagaagccaacgagtgtgtcgcctgc
aattgtaaccttcatgcgaggcgctgtcgtttcaacatggagctttacaaactctccggg
aggaaaagcggaggagtctgtctgaactgccgccacaatacggcaggtcgccactgccac
tactgcaaggagggctactacagagacatgtctaagcccatctctcacagaaaggcctgc
aaagcctgtgattgccatcctgtgggggccgcgggcaaaacctgtaaccaaaccacaggc
caatgcccctgtaaagacggtgtgacgggtatcacatgcaaccgttgtgctaaaggctac
cagcagagccgatcacctattgccccctgcataaaaattcctattgctccaccaactacc
actgcaagcagcacagtgggaccttcagactgtgaatcctactgcaaggcttccaaagga
aagctgaagatcaatatgaagaagtactgcaagaaagattacgctgttcaggtccacatc
ctaaaggcagaaaaagccggcgagtggtggaagttcaccgtcaacatcatctctgtctac
aaacagggtgaaagccgaatccgcagaggagatcagtttttgtgggtcagagcaaaggat
gtagcctgcaagtgcccgaagatcaagcccggaaaaaagtacctgctgctaggcaacgat
gaggattcccctggacagagcggtgtggtggcagacaagggcagtctggtcattcagtgg
agggacacttgggctcgaagactacggaagtttcagcagcgggagaagaaaggaaaatgc
aagaaagcatag
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