Cyprinus carpio (common carp): 109096447
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Entry
109096447 CDS
T05134
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109096447 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109096447 (mid1)
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109096447 (mid1)
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109096447 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
Pur_ac_phosph_N
zf-C3HC4_2
FN3_DSCAM-DSCAML_C
F36G3_coil
TRIM_CC
zf-C3HC4_3
zf-RING_2
zf-RING_5
PRY
Fn3_PBP1
DRC10_N
NDNF
DUF8512
Motif
Other DBs
NCBI-GeneID:
109096447
NCBI-ProteinID:
XP_042587848
Ensembl:
ENSCCRG00000004236
UniProt:
A0A9Q9WQS7
LinkDB
All DBs
Position
B9:complement(31233210..31281294)
Genome browser
AA seq
677 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCPSFDESSKPYSAFQCPTC
RYVITLDQQGLDGLKRNVTLQNIIDRFQKASLSGPNSPSETRRCSRDPFPSVAVDDGRVM
SSPCEAVQCQFCEQDPPQEAVKTCVTCEVSYCQECLRATHPNKKPFTGHRLTEPVPDSRL
RGLACPEHGEEKVNMYCVTDEQLICSLCKLVGHHREHQVAALGERFDKLKHMLDSNLSNL
IKRNSELENLMAKLIQTCQHVEHNAAHQESKLTEECDTLINIVQQRRQIIGTKIKEGKVV
RLRKLAQQIANCKQFVERSSSLIAQADLALKETDHARFLQTAKSISERVSMATASSQVLI
PEINLNDTFDAFALDFSREKKMLEGLDYLTAPNAPTIREELCTASHDTISVHWTSEDEFS
VVSYELQYSISTGQTNVVSLCNSMDSWMIVPNIKQNHYTVHGLQSGTKYIFMVKAMNQAG
SRSSPPAKLKTNSQPFKLDPKSAHRKLKVSHDSLTVERDEASSMKSHAQDRFGSTGNYGV
TGNVFIDSGRHYWEILIGGSTWFAIGIAYKSAPKHGWVGKDSASWVLSRCNTSWAVRHNS
KEFPIEPSPHMRRLGVLLDYDSGSLAFYDAAGTQHLYTFDIAFSQPICPVFSVWNKCLTV
LTGLPIPDHLEISDPRD
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggacacactggagtcggagttaacttgcccaatctgtctggagcttttcgaggatcct
ctactgctgccctgcgcccacagcctgtgcttcaactgtgcccatcgcattctggtgtcc
cactgtccctcgttcgacgagtccagcaaaccctactctgccttccagtgtcccacctgc
cggtatgtcatcaccctcgaccagcagggtctagacggcctcaagcgtaacgtcacttta
cagaacatcatcgaccgcttccagaaggcgtctctgagcgggccgaactctccgagtgag
acgcgccgctgcagccgcgatccgttcccctcggtggcggtggatgacggcagggtcatg
agttcgccgtgcgaagccgtccagtgccagttctgcgagcaggatccgccacaggaggcg
gtcaagacctgcgtcacctgcgaggtttcgtactgtcaggaatgcctgcgcgccactcac
cccaacaagaagcccttcacgggacaccgactcaccgaacctgtgccggactcgcgcctc
agaggactggcctgtcctgagcacggagaggaaaaggtcaacatgtactgcgtgacggac
gagcagctgatttgctcgctgtgcaaactggtcgggcatcaccgtgaacaccaggtggca
gcactgggagagcgattcgacaagctgaagcacatgttggattccaacctcagcaatctg
atcaagaggaacagtgagctggagaacctgatggccaaactgatccagacgtgtcaacat
gtggagcacaatgcggctcatcaagagagcaaactgacagaagagtgcgacacactgata
aacatcgtacagcagaggagacaaatcatcggcactaagatcaaagaaggaaaggtggtc
cgcttgagaaagctagcgcaacagatcgctaactgtaagcagtttgtggagagatcgtct
tcgctcatcgctcaagccgatctggctctgaaagagacagatcacgctcggttcctgcag
accgcaaagagcatctcagagcgagtctcgatggccacggcatcctcacaggtcctgatc
ccagagatcaacctgaatgacacgttcgatgcgttcgcactggacttctccagagagaag
aagatgctggagggtctggattacctgacagctccgaatgctcccactatccgcgaggag
ctgtgcacggcgtctcacgacaccatcagcgttcactggacatcagaggatgagttcagc
gtggtctcgtacgagctgcagtacagcatctccaccggccagaccaacgtcgtcagtctg
tgtaactcgatggacagctggatgatcgtgcccaacattaagcagaatcactacacggtc
cacggcctgcagagcggaaccaagtacatcttcatggtgaaggccatgaatcaggctggg
agccgcagcagccctccggccaaactcaagaccaacagtcagccgtttaagctcgaccca
aagtcggcccacaggaagctgaaggtgtcccatgacagtctgacggtggagcgggacgaa
gcctcgtccatgaagagccacgctcaggaccgcttcggcagcacggggaactacggcgtg
acggggaacgtgttcatcgacagcggcaggcactactgggagattctgatcggaggaagc
acatggtttgctatcgggatcgcctacaaatcggctcccaaacacggctgggtcgggaag
gactcggcatcatgggtactgagccgctgcaacacctcgtgggccgtgcgtcacaacagt
aaggagttccccatcgagccgtctcctcacatgcggcgtctgggcgtcctgctcgactac
gactccggctctctggcgttttacgacgccgctggaacgcagcacctgtacaccttcgac
atcgccttctctcagcccatctgtcccgtcttcagcgtgtggaacaagtgcttgaccgtc
ctcacggggctccccatcccagaccacttagagatcagcgacccgcgcgactga
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integrated database retrieval system
