Cyprinus carpio (common carp): 109096470
Help
Entry
109096470 CDS
T05134
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109096470 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109096470 (lmo7a)
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109096470 (lmo7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
109096470
NCBI-ProteinID:
XP_042587252
UniProt:
A0A9Q9WPN1
LinkDB
All DBs
Position
B9:18851514..18895831
Genome browser
AA seq
1881 aa
AA seq
DB search
MEWRPQSSVGCEAAYSEAQRWIEAVTKKKFVSSNFRSSLENGLLLCDLINKTRPGVVKKL
NRLSTPIAGLDNISLFLKACAKLGLKEAQLFHPGDLQDLSTRVTVKHQESSRRLKNVLIT
IYWLGRKTHADPFYNGPYLKLKAFEGLLGKALNKTLEDCTSLQGSVRNSSCRDSWYSEKE
ELFPLRAGHRREDSLDSLDSLGSRTYSTSSDATLKGSSEGCGSDPEADLSFMMSENKEYR
RSLVIAPKATTQYNQFLPTKDKQTGYVPAPLRKKRAERNDDNRRSWASPMYTEDDGTFTS
HERASSDPSSITGLKEQTAAHPSLTYQYESSDSDADRPDPDVVLDDLASRRFHSPSPVAP
TNFALPMSHLEATAVPCTTRSQVAVSNVSRETLTHLSSQSQPLQRTYRRPVSAGVCVYDD
SEEEDDEFGYADPVQDDLYARKVGLTPQPSVTVPFDKFLPKFWTPDEDAHVKKIKLGSQR
RPWYRKIQGFSPKKSGSSSEESDGDVNPWLSVPTFSRTQSEPPPSHSHAPEGLAQSSLTS
TLSYQTQPLTVAQQTAGLHNLKPPDFWPRPDPASGPRLIKCEKHSLLGREHPNDPYNVSA
DILPDLENDDMFTRRTKTFHSSDDLAKLKYGNFLLPRRRSEADVMVVIQPRHESEPIYPD
IEKDDVVFRRAQQQISHRPLSGAPDNYHPVRIPEAWALPPKLQAKLMCDPVEPRQHKPNP
EIKHGAEQHLKADDMLLRKLRALNTQEKMESGALGVSFSCSEEDMQKWQAIREASRVRYR
KRLMVERLLQKSSGSEGSKSVSDITDGEMNLSNLPIELRVEEMQKMRARLKENEDKWQDD
LSRWKNKRRSVNSDIVKKKEEREQIEQITSGSIRKSKTFKEMQDERESRQQSNYRDSFNS
ISDDVFEEPVPRSRTLPARSYTIDTPYTPKDKPSVPSIPTLREKEPVAGTLASDQTDFHT
RRDRSSPDIPLKIEESHTTIQSLLDDPVPALSSSNTSLIKPTSVSKTSSVLSSSELISNT
KPVENSSGPISSLYKPNSMDTKQSGLDQVSASLPRSYQRSDSARLTSVVTPRPFGTKSNR
IASLPRAFTVDDSLKRTNGETDSIKKTAISNRYAQYVKEDEDISQESPVQSSEEEEKTPS
PVPPVHRLSPLPKSPSPSIPSNEVDYSEMRISLNQKPNSSRDFGFQSNWDSTGVRVKSVV
PGSPAELGQVKVGDEILTVNGRMVADMSYTEWKNSMEEALQQGSLFMDIRRHGKNNWGRD
LPSLPFKSHKTINLTSLDPLGPSEPYLSTNLDFTSQQTKDMVVKTVNVSSQSGNNYGLNG
INGGFHEDSETSNNKESITLKNLKRRSEFFEQGLTVSSLVYLCGGSDTAISNLPVPSITA
STTRWSWDPEEERKRQEKWQKEQERLLQEKYKKDQEKLDEEWRKAQQELEKENFKKHEEE
MWRLEEERRKREEQERLEEEKKKREEEERKKREQERLRLEEERRKQEEQERLEEEKKKRE
EEERKKREQERLRLEEERRKREEQEHLEELRRNREEEERLLQEKERNRREEERRRLEEQK
RRQEQDKVDSFGYTNVYPQLSYSHRSISKSTPELDEVAKPDIKGVYGRHRGLAGWLLEEE
LRRKKNTQIQREQAASELELERRSILNAMKYRDPERASGGLGEFSRDYKKEPHSQTEVER
QQILHEMRKKTSLNTDNSWIRQQSAASVTAKEPIDLPIRRGESLDNLDMPHSSWRSSWST
SNSTSSIPDYSRPHSSLSGSSSYQSGRPGSATLQSSESMSSLRQSWSPSAATPEPEPRAP
PRNRSVSGRKICSSCNTPLGKGAAMIIESLGLCYHLSCFKCFNCRSDLGGSEAGAEVRIR
NQQLYCNSCYVRLKTGQPTAM
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgaccgcagtcttcagtgggttgtgaggcagcttactcagaagcacagaga
tggattgaggcagtcaccaagaagaagtttgtgagcagtaatttccggagttctctggag
aatggacttctgttgtgtgatctgataaacaagaccaggcctggcgtcgtcaagaagcta
aacaggttatccacacctattgctggcctggacaacatcagcctcttcttaaaagcctgt
gcaaagcttggactaaaagaggcccagcttttccacccaggagaccttcaagacttatcc
acacgtgtgactgtcaagcaccaggagagcagcaggaggctcaaaaatgttctgatcacc
atatactggttgggcagaaagacacatgctgatcctttttataatggaccttacctaaaa
ctaaaggctttcgagggattacttggcaaagcactaaataagacactagaggattgcaca
tcactgcagggcagtgtgcgaaacagctcttgtagagatagctggtactcagagaaagaa
gagctcttcccactacgagccggacacaggagagaagactctctagacagcctcgactca
ctgggctccagaacttacagcacatcctcagacgctacactcaaaggaagcagcgagggt
tgtggcagtgaccctgaagcagatctgagcttcatgatgtcagaaaataaagaataccgc
cgttcactggtcatagcacctaaggccaccactcagtacaaccagttcctgccaacaaag
gacaagcagacaggctacgttccagcaccattacgcaagaaacgtgcagagcgaaatgac
gacaacagaagaagctgggctagccctatgtacacagaagatgatggcacttttacaagt
catgagagggcaagttcagacccttcatctatcaccggtttaaaagaacagacagccgct
cacccgtctttgacctatcagtatgagagcagtgattcggatgcagaccgaccggatccc
gacgtggttctagatgaccttgctagccgtagatttcacagcccctcccctgttgctccg
accaactttgccttacccatgagccacctggaggcaactgctgtcccgtgtactaccagg
tcacaggtggctgtcagtaatgtgtcccgggagacactgacccatctcagcagtcagtca
cagcctcttcagaggacttacaggagacctgtatctgctggtgtctgcgtttatgatgac
tctgaggaagaggatgacgagtttggctatgccgatcctgttcaagatgatctttatgcc
cgtaaagtaggcctgacacctcaaccgtctgtaacagtgccttttgataaatttctgccc
aagttctggacacctgatgaggatgcacacgtgaagaagatcaaactaggctcccagcgc
cgaccttggtacaggaagatccaaggtttcagccccaagaagtcaggttcatcctctgaa
gaatcagacggtgacgtcaacccctggctctctgtacctactttctctcgcactcagtct
gaaccccctccctctcactcccatgcacctgaaggcctcgctcagtccagcctcacttcc
acactcagttatcaaacacaacctctcacggttgctcagcagactgctggactgcataat
ttaaagccccctgatttttggcccagaccggatcccgcctctgggcccagactcataaaa
tgtgaaaagcattccctccttgggcgtgaacaccctaacgacccatacaacgtttctgcc
gacatcctgcctgatttggaaaatgacgatatgttcacacgccgtacaaaaaccttccac
tcaagtgatgacctagccaaattgaagtatggtaacttcctgttgcctcgccgcagatcg
gaggccgacgtcatggtggtaattcagccccgccacgagagtgaacccatttatccagac
attgaaaaagacgatgtggtttttcgaagggctcaacagcaaatcagtcatcgccctctg
tctggggcccctgataactaccaccctgttcgtattccagaggcatgggctttgccacca
aaactgcaggccaagctgatgtgtgacccagtggaacccagacagcacaaacccaatcca
gagattaaacacggagcagaacagcacctgaaggcagatgatatgctacttaggaagcta
agagctttaaatacccaagaaaagatggaaagcggagctcttggtgtttctttctcttgc
agtgaggaagatatgcagaaatggcaagccatcagagaggccagccgtgtgcgataccgg
aagaggctgatggtggagagactgctccagaagagctctggtagtgaagggagcaaatca
gtgagtgacatcaccgacggtgagatgaacctcagcaacttgccgatagagttgcgagtt
gaagagatgcagaagatgcgtgctcggttgaaggagaatgaggataagtggcaagatgat
ctttcaaggtggaagaataagcgcaggagtgtgaattctgacattgtgaagaagaaagag
gagagagagcagattgagcagatcacttcaggcagcatcaggaaatcaaagaccttcaag
gaaatgcaggatgagagagagagccgacagcaaagcaactacagggacagctttaactcc
atctctgatgatgtcttcgaagaacctgtaccccgaagcagaactctgccagcacgtagc
tacaccattgacaccccttacacccccaaggacaaaccttcagtaccctccattccaact
ctgagagaaaaggaacctgtcgctggcactctggcatcagatcagacagattttcatacc
agacgtgatcgctccagcccagatatcccactgaaaattgaggagagccatacaacgatc
caaagccttctggacgatccagttcctgcgttgtccagcagcaacaccagcctgatcaag
cccaccagcgtcagtaaaaccagcagcgttctcagcagctcggagttgattagcaacact
aagccagtcgagaactccagcggccccattagctctttgtataaacccaattcaatggat
acaaagcagtctgggctggatcaagtttctgcctccctccccaggagctaccagagatca
gatagcgcaagactcacctctgtagtcacgcccaggccattcggcacaaaatccaaccga
atcgcctcccttcccagagcattcacggtggacgactctcttaaacgcacaaatggagaa
acagatagcatcaagaaaactgcaatttctaaccgatatgctcagtatgtgaaagaggat
gaagatatttcccaggaaagtcctgtgcaaagcagtgaggaagaggagaaaaccccatct
cctgtccctccggtccacagactgtcccccctgcccaaatctccatccccgtccatccct
tctaatgaggtggactacagtgagatgaggatcagcctgaaccagaaacccaacagcagc
cgggactttggctttcagagcaactgggactccacaggggtccgtgtcaaatctgtagtt
ccaggcagcccagctgagctcggtcaagtgaaggttggagatgagatccttacagtgaac
ggccgcatggtggcagacatgagctatactgagtggaagaacagtatggaggaggccttg
cagcagggtagtctgtttatggacatccgcagacatggcaagaataactggggcagagac
ctaccttcccttccatttaaaagccataagaccatcaatctgaccagtctggatcctcta
ggtccctccgagccatacctcagcaccaacctggatttcacatcccaacaaaccaaggat
atggtcgtgaaaactgtgaatgtcagctcacagtctggcaataattatggtttgaatggg
ataaatggtggtttccatgaggattcagagacttcgaataataaagaatccattactttg
aaaaacttaaaaaggagatcagagttttttgaacaagggctcacagtcagttctctggtc
tacctctgtggtggatcggatacagcaatatcaaatctgcccgttccctccatcactgca
tccactacccgctggtcctgggaccccgaagaagagcgcaaacggcaggagaaatggcag
aaagagcaggagcgtttgctgcaggagaagtacaaaaaggaccaagaaaaactggatgag
gagtggaggaaggcacagcaagagcttgagaaggagaacttcaaaaaacatgaggaggag
atgtggcgtttagaggaagagaggaggaaaagagaggaacaagagcgccttgaggaagag
aagaagaagagagaagaagaggagaggaaaaaaagagaacaggagaggctgcgtttagag
gaagagaggagaaaacaagaagaacaagagcgccttgaggaagagaagaagaagagagaa
gaagaggagaggaaaaaaagagaacaggagaggctgcgtttagaggaagagaggaggaag
agggaggaacaagagcaccttgaggaactgaggaggaacagagaagaggaagagcgcctc
cttcaggaaaaagaaaggaatagaagagaggaggagaggaggcgactggaggagcagaag
agaagacaggagcaagataaggtggactcctttggctataccaatgtttaccctcaatta
tcctactcacacagatctatttccaaatcaactccagaacttgatgaggttgcaaaacca
gatattaaaggtgtgtacggcagacacaggggtttggcaggatggctgctggaagaggaa
ctgaggcgaaagaaaaacactcagatccagagagagcaggcagcgagtgagctagagctt
gagaggaggagcattctcaatgccatgaaatacagagatccagagagagcgagcggtggt
ctgggtgagttcagtagagactataagaaagagcctcattctcagactgaggtggagagg
cagcagatccttcatgaaatgagaaagaagacttccttgaacacagacaacagctggatt
cgccagcagagtgctgccagtgttaccgccaaagaaccgattgatctgcccattaggaga
ggcgagtctcttgataacctcgatatgcctcattcctcttggagatcatcatggagcaca
tctaacagcacctcgtccataccagactacagccggcctcattcgtccctctccggctcc
tcgtcgtaccagagtggacgtccagggtctgcaactctgcagtcatctgagtccatgagc
tccctcaggcagtcctggtccccatctgcagctacaccagagccagagcctcgagctcca
ccacggaataggtcagtgagtggcaggaaaatatgttcatcctgtaatacaccactgggc
aaaggagcagccatgatcatcgagtccctggggctctgttatcatttgagttgtttcaag
tgctttaactgcaggtctgatttgggaggctcagaagcaggagcagaagtcagaatacga
aaccaacagctctattgtaactcctgctatgtgcgactcaaaactgggcagcccacagcc
atgtga
DBGET
integrated database retrieval system
