Cyprinus carpio (common carp): 109096627
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Entry
109096627 CDS
T05134
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04080
Neuroactive ligand-receptor interaction
ccar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109096627
04082 Neuroactive ligand signaling
109096627
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109096627
Ion channels [BR:
ccar04040
]
Ligand-gated channels
GABA-A
109096627
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF6768
Motif
Other DBs
NCBI-GeneID:
109096627
NCBI-ProteinID:
XP_042603872
Ensembl:
ENSCCRG00000001300
UniProt:
A0A9Q9XL65
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Position
B21:19708092..19728701
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AA seq
460 aa
AA seq
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MTWIRSCFFLSCVGQVFANPPTETRIYLDNITRVLDRLLDGYDNRLRPGFGGPVTEVKTD
IFVTSFGPVSDVEMEYTMDVFFRQTWIDDRLKFEGPIEILRLNNLMVSNIWTPDTFFRNG
KRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLINFPMDGHSCPLKFGSYAYPM
SEIVYTWKKGPLFSVEVPQESSSLLQYDLIGQTVSSERLKSNTGEYIVMTVYFHLQRKMG
FFLIQTYIPCIMTVILAQVSFWIDKESVPARTVFGITTVLTMTTLSISARHSLPKVSYAT
AMDWFIAVCFAFVFSALIEFAAVNYFSTLQANKELRRVSMACAAVRSDGEVVTNPLDPGG
VLKKRLNSVSQRDAPDRFSRAPQPGLHQQGSTVPAINTLTTSIIDKYSRILFPLSFGAFN
LVYWIVYLTKDTMESRGKKRMKEKGLKASMKALSRDKGNI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacttggatacgctcatgttttttcctgtcttgtgttggacaggtgtttgcaaatccg
ccaaccgagacgaggatatatttggataacattacgcgcgttttggatcgattattagat
ggatatgacaacagactccgacctggatttggaggtcctgtcacagaggttaaaacggac
atatttgtcaccagctttggtcctgtttctgatgtggaaatggaatacacaatggatgtg
ttttttcggcaaacctggatagacgaccggctgaaatttgagggccctattgagatcctg
cgtctcaacaacctaatggtcagcaacatttggacaccggacactttcttccgaaatggc
aaacgttctatttcgcacaacatgaccactcccaacaagctgtttcgcatcatgcagaac
ggaactattctgtacaccatgaggttaaccatcaatgctgagtgtcccatgcggctgata
aattttccaatggatggacattcatgtcctttgaaatttggcagctatgcctacccaatg
agtgagattgtttacacgtggaagaaagggccattattttcagtggaggttcctcaggag
agttccagtctgctacagtatgatctcattggacagacggtgtctagtgagaggctgaag
tcaaacacaggtgaatacatagtcatgacggtgtacttccacctgcagaggaaaatgggt
ttcttcttgatccagacatacatcccgtgcattatgactgtgatcctagcacaggtctcc
ttctggatcgacaaagagtcagtaccagccagaactgtgtttggcatcaccacagtacta
accatgaccacgctgagcattagcgctcgtcactccttacccaaggtctcctatgccacc
gccatggactggttcatcgccgtctgctttgcattcgtcttctcagcccttatcgagttc
gctgctgtcaactatttctccaccttgcaggccaataaggaacttcggcgggtcagcatg
gcctgtgctgcggtcagaagtgatggagaagttgttacgaatcctctggaccctggaggt
gtgctgaagaaaaggctgaactctgtctctcaaagagatgctcctgacaggttctccaga
gctccacagcctggtctccatcagcaaggctccactgtccctgccatcaacacgctgaca
actagtattattgacaaatactctcgcatcctttttccgctgtccttcggggccttcaac
ctggtctactggattgtctatctcaccaaagacactatggagtccagagggaaaaaaaga
atgaaagagaaaggcctcaaagcctccatgaaagcactgtcacgggacaaagggaacata
taa
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