Cyprinus carpio (common carp): 109096807
Help
Entry
109096807 CDS
T05134
Symbol
si:ch211-269e2.1
Name
(RefSeq) LOW QUALITY PROTEIN: cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109096807 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109096807 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
109096807 (si:ch211-269e2.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
AAA_lid_5
WipA_N
Motif
Other DBs
NCBI-GeneID:
109096807
NCBI-ProteinID:
XP_042587517
Ensembl:
ENSCCRG00000011673
UniProt:
A0A9Q9WQ49
LinkDB
All DBs
Position
B9:21999624..22018246
Genome browser
AA seq
1176 aa
AA seq
DB search
MIAEPTLLSRSVQKENSVVDVSSCASVHHVSSERNENRQKTVRGKRKARECSENAKRKHS
KSSNGSLGRAENEQLKNGDVEAVTLFEVVSMGRNAMQAVVDDWIDAYTGDRDSALLDLIS
FFIQCSGCKGMVTAEMFQSKKGTDVMSKMVEDLDEDTGLQYKKFLAFPWILTVTWPLDMD
SGEYPLIMSGLYWKRFRSHFCEFVSVLVAQCQNCVIFDGYLLNTLISLLTELSDSRVRAF
RHTCTLAAVKLLSALVNVALNLSVSVDNSQRLYEVELAKMASKRASPRLDRIQRKISELQ
DRKCEIENMMDAIFKGVFLKRYRDVIPEIRAICMEELTVWMKLYSSVFLNDSYLKYVGWM
MHDKQPDVRLKCVLGLQALYQDQSSSKMDLFTIRFKERMISMTLDKDHEVAIQAMRLLMV
ISQSCEDVLSPDDHKNVFQFVYCSHRPLATTAGEFLYNRLLSNHELSKPRDGASDQERHR
ELVLARVRALIHFHTENELHQHVLYLVDSLWDSAGALLKDWTGLTSLLLPHTSCQEQALS
SAEEAFVIELILASVRQAAEGPPLSGRGAGKKVINTKEKKLQIDDCTKLTEHFIKVLPEL
LSKYSEDAEKLASLLKIPQYFQTDTCDHENSQCVRALLAELEAAVDRHTDAGLLEAAARS
YQSLCAQDLPWHSLARPSFDRLIQHWTDTLGTRLGESLSDGCFTANEDSTLEFLSTLKKL
NAFNVAQDLSKWSLYELGTRLLDVEIKHSGLPMEVTIEALRCMCSCILWKLNTFGEGLTS
RESALQQRSQLRAFCEKCHRCLSHAEQLVREQAFMCLSDVLIAHNYQLQMWDSSAGTPLL
YTPDPKLQKALLSFVVEHVFTSPEQDTHSSKVSESECGDGRLEDLHRRRNLLAAYCKLIV
HSVLEMSMATELFKQYVKFYNDFGDIIKETLNRTRQMDKMESARTLVXCLQQLYLRLKQE
QDRGNTCSSRVQTYSSIKELARRFSLTFGWDQIKSRESLAMIHRDGIEFVFKGFVQQSEK
HSPPYISYLTILSEFSSKLLKPDKKTIYSYLQKFAGEQVINNREESWMPLIYYRASLMGT
AEGEDAISFISSDTNKQPSLSNRSRSPSVRQVNSEGDQRFLSPSLEPKGNELLKSSEDSK
VQQAPLSREQLSSSLVSDKVLRSSDEVDVDTVDIDG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatagcggagccaactttactgtccagatcggtgcaaaaagagaactcagtagtagac
gtctcttcctgtgcatcggtgcatcacgtttcaagtgagagaaatgaaaacagacagaag
actgtgagaggaaagaggaaagcccgggaatgctctgagaatgccaaaagaaagcattca
aagagcagtaatggcagcctgggcagagcagagaatgaacagctcaaaaatggagacgtg
gaagctgttacactgtttgaggtggtcagcatgggcaggaatgcaatgcaggctgtggtg
gatgactggattgacgcttacactggtgacagagactcagcactgctcgatctcatcagc
ttctttatccagtgttcaggatgcaaagggatggttacagcagagatgtttcagagcaaa
aagggtactgatgtcatgagtaaaatggtggaggatttggatgaggacacaggtttacaa
tataagaaattccttgcatttccatggattttaactgtcacgtggcctcttgacatggac
agcggcgagtatcccctcatcatgtccggcctgtactggaagaggtttcgttcacacttc
tgtgaatttgtatcggtgctagtggcccagtgtcagaactgtgtaatctttgacggctac
ctcttgaacacactcatttcactactgacagagctctccgattccagagttcgcgctttc
aggcacacctgtacactagcagcagtgaagctgctcagtgctttggtgaatgtggctctc
aacctcagtgtcagtgtcgataacagtcagcggctgtacgaggtcgagctggccaagatg
gccagcaaacgggcttctccgaggctggacaggatccagagaaagatcagtgagttacag
gacaggaaatgtgaaattgagaacatgatggatgccattttcaaaggagtcttcctgaag
agatacagagacgtgattcctgaaatcagggccatctgcatggaggaactcacagtgtgg
atgaagctgtatagttcagtgtttctaaacgacagctatctgaagtacgtgggatggatg
atgcatgacaagcaacctgatgtgcgtctgaaatgtgtgctgggtctacaggccctttat
caggatcaaagtagttccaaaatggaccttttcacgatacggtttaaggagaggatgatc
tccatgactctggataaagaccatgaagtggccatacaggccatgagattgctcatggtc
atctctcaatcctgtgaggatgttctgagtcctgatgaccacaagaatgtcttccagttt
gtttactgctcccacagacctctagctaccactgcgggtgaattcctctataacaggctg
ctcagtaaccacgaattatcaaagcccagagatggagcctctgatcaggagaggcacaga
gagttagtcttagctagagtccgagctctgatccacttccacaccgagaatgagctgcac
cagcatgtgctgtacctcgtggatagtctgtgggacagtgcaggggctctgctgaaggac
tggaccggtcttacctcactgctcttacctcacacgtcctgtcaggaacaagctctgagc
agtgctgaggaggcctttgtgattgagctcatattggcgtcagtgaggcaggctgcagag
ggtcctcctttgtcagggagaggagcaggtaaaaaggtgataaatactaaagagaaaaag
ctacaaattgatgactgcacaaaactcactgaacacttcattaaagtgctgcctgagctg
ttatccaagtactcagaggatgcagaaaaactcgcctcccttctaaaaatacctcagtat
ttccaaacggacacctgtgatcatgaaaactcacagtgtgtgcgggcattgctggctgag
ctggaggctgcggtggacagacacacagatgctggactgctggaggcggctgctcgttct
taccagagcctctgtgctcaggatttgccctggcactctctggcccggcccagctttgac
cggctcatccagcactggacagacacactgggaacgcggttaggagaatcactgagtgac
ggttgttttactgcaaacgaggacagcactttggaatttctgtccacactgaagaaactt
aatgcgttcaatgttgctcaggatctgtctaaatggagcctgtatgagctggggaccaga
ctcttggatgtggagataaaacatagtggtcttcctatggaggtgacaattgaggctctg
cgctgcatgtgtagctgcatcctttggaagctcaacacctttggagaaggtttgacctct
agggagtccgccctccagcagagaagccagctacgtgcattctgtgagaaatgtcaccgc
tgtctctcgcacgctgagcagcttgtacgagagcaagccttcatgtgtctgagtgatgtt
ctcatagctcataattaccagcttcagatgtgggattcatctgcaggcactccgttgctg
tacacccctgatcccaaactccagaaagctcttctttccttcgtcgtggagcatgtcttc
accagccctgagcaggacacccacagtagtaaagtcagtgagagtgagtgtggagacgga
cggctggaagacttgcaccggcggagaaatcttctggcggcttactgcaagctgatagtg
cacagtgtgttagaaatgagcatggctactgagcttttcaagcagtatgtgaagttctac
aatgacttcggcgacatcatcaaagagaccctgaacaggacacggcagatggacaagatg
gaaagcgcacgcacgctggtgnagtgccttcagcagctgtatctgaggctgaaacaggag
caggacagaggaaacacctgcagctccagggtccagacctacagcagcatcaaggagctg
gccagacgcttctcactcaccttcggctgggaccagatcaaatcccgcgagtccctggcc
atgatccacagagacggcattgagtttgttttcaaaggcttcgttcagcagtctgagaaa
cactctccaccgtacatctcatacctcaccatcctcagcgaattctccagcaaactgctc
aaaccggacaagaagactatctacagttatttgcagaagtttgctggtgagcaggtgatt
aacaacagagaggagagctggatgccgctgatttactacagagcgtctctgatgggcacg
gctgagggagaagatgccatctccttcatcagctctgacactaacaaacagccctccctc
agcaaccgctccagatcaccctccgtcagacaagtcaactctgaaggggaccaaaggttt
ctttcgccctctttagaaccaaagggaaatgagcttctgaaaagttccgaagactcaaaa
gtccaacaagccccactgagcagagagcagctgagcagcagtctcgtgtctgataaagtt
ctaaggagcagtgatgaagtggatgtggatactgtagatattgatggctaa
DBGET
integrated database retrieval system
