Cyprinus carpio (common carp): 109096819
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Entry
109096819 CDS
T05134
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109096819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109096819
03021 Transcription machinery [BR:
ccar03021
]
109096819
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109096819
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
109096819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109096819
NCBI-ProteinID:
XP_042587506
UniProt:
A0A9Q9WQ52
LinkDB
All DBs
Position
B9:21937623..21951189
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AA seq
690 aa
AA seq
DB search
MADGGAASQDESSVPDSKMSNPSETSKCAMESGDENTGAQTNGLDFHRQTVQTTSAITNA
HAQALLQQLTLTPAQQQLLLQQAQAQLLAAAVQHSAGQQSSTTGASISASAATPITQIPL
SQPIQITPQLQHLQQQQNLNLQQFVLVQPGHHIATQLQPAQFIISQTPQGQQSLLQAQNL
LTQLPQSQANLLQTQPSITLATQPATPTRTIAATPIQSLPHSQTTPKHIDTPSLEEPSDL
EELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPL
LEKWLNDAVCAENQTSDQALSSPSSLGSPGLGMEGLNRRRKKRTSIETNIRVALEKSFLE
QNPKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGSAVSTPIKAIFSPATP
LAPNTASLVTSNTLTSTSVSSVGFTGTTIGSASTNTASVISTAPVITTAASSPSLSPSPT
AAQTSSSEHTSAQGTVTAVSQAPSSLAATLGTGQVMVAGPSLSAALQGATQLPTSASIAA
MAAAAGLNPGLMASSQFTPGGAFLSLAPGGLGSALSPALMSNSTLATIQGVWSALASSGS
LPITSLDGSGNFLFANTSAGSTPNLVTAPLFLNPQNLSLLASNPVSLVSAGGAGGAAGAL
NLHITADAHQSAVTTATMPASTITTASKAQ
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcagtaccagattctaaaatgagt
aatccatcggaaacaagtaaatgtgcaatggagagcggggacgaaaacactggtgcccaa
acaaatggactggactttcataggcagactgtgcaaacaacaagcgcaatcaccaacgca
cacgcacaggccttgctccaacagttgactttgactccagcgcagcagcagttattgctg
cagcaggctcaggctcagctcttagcagcagcagtgcagcattcagccggccagcagagc
agcactacaggagccagcatctctgcctccgctgccacccccatcacccagatccccctc
tcccaacccatccagatcacacctcagttacagcatctgcaacagcagcagaacctcaac
ctgcagcagtttgtgctggtccagccgggccaccacatcgcaacacagctgcagcctgcg
cagttcatcatctcgcagacaccacagggccagcagagtctcctgcaggcccagaacctt
ctaactcaactacctcaaagccaagccaacctcctgcagacccagccaagcatcacactt
gccacacagcctgctacacccacacgcacgatagcagcgacccccatccaatcccttcct
cacagccagacgacaccaaagcacatcgacacacccagcctggaggagcccagcgacctg
gaggagctagagcagtttgccaagaccttcaaacagagacgtatcaaactgggcttcacg
cagggggatgttggccttgccatgggaaaactttatggaaatgacttcagccaaaccacc
atttctcgctttgaggccttgaacctgagctttaaaaacatgtgcaaactgaagcctctg
cttgaaaaatggctcaatgatgcagtttgtgcagagaaccagacgtctgaccaggccctg
tccagtcccagctctcttggctcacctgggctgggcatggagggcttgaaccgccgccgc
aagaagaggaccagcattgagaccaacatcagagtggccttagaaaagagctttctggag
cagaacccaaaacctacctctgaggagatcaccatgatcgcggaccagctcaacatggag
aaagaggtgatccgagtatggttctgtaaccgcagacagaaagagaagaggatcaaccca
cccagcagtggcagcgccgtcagcactcctatcaaagcaatcttctctcccgccacacct
ctggcaccgaatacagcaagtcttgtgaccagtaacactctcaccagcactagtgtctcc
agcgtcggtttcactggcacaactattggctctgctagcactaacactgcatcagtcatc
tccactgcacctgtgatcaccaccgcagcatcctctccttcgctcagcccttctcccacc
gcagcgcagacgtcctcttcagagcacacttcagctcaggggacggtgacggctgtaagt
caggcaccttcttcactggcggcaactctgggcactgggcaggtgatggtggcgggaccc
agtctttcagccgctctgcaaggagccacccagctgcccaccagcgccagcatcgctgcc
atggctgcagccgcaggcctcaatcctgggctcatggcgtcttcacagttcactcctggc
ggggcttttctaagtctggcacccggtggtctcgggagcgctttgagtccagcactgatg
agcaacagcaccttggccacaatccaaggtgtgtggagcgctctggcatctagtggcagt
ctgcccattacatctctggatgggagcgggaactttctgtttgccaacaccagcgctggc
agcacccctaacctcgtgacggcaccgctctttctgaaccctcagaacttgtcattgctt
gccagtaacccggtcagcctggtgtctgcgggaggggccgggggggccgccggagccctc
aacctgcacatcaccgccgatgcccaccagagcgctgtcactacagcaactatgcccgcc
tccaccatcaccacggcctctaaggcccagtga
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