Cyprinus carpio (common carp): 109096839
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Entry
109096839 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: double-stranded RNA-specific editase 1-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109096839
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109096839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
SNAD4
Motif
Other DBs
NCBI-GeneID:
109096839
NCBI-ProteinID:
XP_018966048
Ensembl:
ENSCCRG00000016960
UniProt:
A0A8C1R7K3
A0A9Q9ZJ13
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All DBs
Position
A9:24984791..25032467
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AA seq
821 aa
AA seq
DB search
MMSWTELAGADCSCLSTKSRGGGGDHACVCVCGRAERGLPAHTFTECLRNTGQCSQVASC
VRLERQGQAAMALVVDTAHCMGAYYCLVRTRFKRRRKKRSERKGVAMAQQAQSQSRRFTT
MDVDEEENMSSCSTDVKENCNLDNVSSKEGAGLVEQLPNGSGGGGRKRPLEEGNNGHAHS
KFRPKKRKKTPGPVLPKNALMQTKXNKPCIKNNPLTQTRPSPPAFVINVQFKLTVIRSIA
PGLRKKKKAKLNAAEKALRSFVQFPNASEAHMAMGRTLTVNTDFTSDQADFPDMLFNGFE
TPAPSEETFFLGSNGNGSLKPLGEYPVPQAPGTNSLVQAPLPPPSSFTSSTSGKNPVMIL
NELRPGLKYEFVSESGESHAKNFVMSVTVDSQTFEGSGRNKKLAKARAAQAALSALFNMQ
LDQTPSRQPIPREGLQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTG
TDVKDAQVICVSTGTKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYMQLEHFLSNNKE
EHQKSIFTQCDKRGYRLKDNVQFHLYISTSPCGDARIFSPHEAGVEDQGDRHPNRKARGQ
LRTKIESGEGTIPVRSSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFTEP
IYFSSIILGSLYHADHLSRAMYQRIADIEDLPQQFSLNRPLLSGISNAEARQPGKAPNFS
VNWTVGDQTLEVINATTGKDDMGRASRLCKHALYSRWVRLHSKLSSTLLIKVPKPSSYHE
AKQAAEEYHSAKQMLIKAFHKAGLGAWVKKPIEQDQFSLNS
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatggactgaactggcgggagcagactgctcttgcctcagtaccaaaagcaga
ggagggggaggagaccacgcatgtgtttgtgtgtgtggtagagctgaaagggggctgccg
gcgcacaccttcactgagtgcctcagaaacacaggacagtgcagtcaggtagcttcctgt
gtccgactcgagcgtcagggtcaagcggctatggccctggttgtggacaccgcgcactgc
atgggggcctactactgcctcgttaggacccgattcaagcggcgacgcaagaagcgctcg
gagcggaaaggtgtggccatggctcagcaagcgcagagccagtcgaggcgtttcaccacc
atggatgttgatgaggaggagaacatgagttcatgcagcaccgacgtaaaggaaaactgc
aacctggacaacgtctcttctaaggagggagctggcctggtggagcagctccctaatggt
agtggaggagggggtcgcaagcggcccctggaggagggcaacaatggccacgcgcactcc
aaattcagacccaaaaaacgtaagaaaacaccagggccggttctgcccaagaacgccctg
atgcaaacgaaataaaacaaaccttgcattaaaaacaaccctctcacacagacccggccc
agtccacccgccttcgtcattaacgtacagtttaaactaacagtcattcgatcgatcgct
ccaggcctaagaaaaaagaaaaaggccaagttaaatgcagctgagaaggctctgcgttcc
tttgtgcagttcccaaacgcatccgaggcgcacatggccatgggccgtactctcaccgtc
aacacagatttcacctccgaccaggctgacttccctgacatgctcttcaacgggtttgag
acgccggcaccgtccgaggaaacattttttctgggctccaatggcaacggctccttaaaa
ccgctgggagagtatcctgtgccccaggcaccaggtacgaacagccttgtgcaggcgccg
ctgccgccgccctcctccttcacctcctcgaccagcggcaaaaaccctgtcatgattctc
aatgagctgcggccgggcctcaaatacgagtttgtgtcggagagcggggagagccacgct
aagaactttgtgatgtcggtgaccgtggactcgcagacatttgagggctcaggacgaaat
aagaaacttgctaaagctcgggctgcccaagcggctctgtcagcgctcttcaacatgcaa
ctggaccagaccccgtcacgccaacccatcccgagagaggggctacagctgcacctgccg
caggtccttgcagatgctgtttctcgtctggtagtggacaaattcagcgagctcactgac
aacttcacgtctccacacgcgcgacggaaagttcttgctggtgttgtcatgacaacaggc
actgatgtcaaggatgctcaggtcatctgcgtctccacgggaaccaaatgtataaacggc
gagtatatgagcgaccgtggcctggcgctcaacgactgtcacgctgaaatcattgctcgt
cgctccctgatcaggtatctctacatgcagctggagcacttcttaagtaacaataaagag
gagcaccaaaagtccatattcacgcagtgtgacaaacgtggctaccggctgaaagacaac
gtccagtttcatctttacatcagcacatcaccttgtggagacgctcggatcttctctccg
cacgaggcgggtgtagaggaccagggagacagacacccaaacaggaaggcaaggggccaa
ctgaggaccaagatcgagtctggagagggaaccatcccggtgcgctctagtaacactata
cagacgtgggacggagttctgcagggcgagaggctgcttacgatgtcatgcagtgacaaa
atcgcaaggtggaacgtggtgggcatccagggctctctgatgagctacttcaccgagccc
atctacttctccagcatcatcctgggcagcctgtatcacgctgatcatctctccagagcc
atgtaccagcggatcgctgacatcgaagacctgccccagcaattctccctcaaccgcccc
ctgctcagcggaatcagtaacgctgaggcccggcagccggggaaggctcctaacttcagt
gtgaactggacggtcggagatcagactctagaagtcattaacgccaccacaggcaaggat
gacatgggcagagcctcacgtctctgtaagcacgccctatacagccgctgggtgcgacta
cactctaagctttcgtcaactctgctaatcaaagtgcccaagcccagctcgtaccacgaa
gccaaacaagcagcggaggagtaccattcggccaagcaaatgctcatcaaggcctttcac
aaagcgggtctgggagcctgggtgaaaaaacccatagaacaggaccagttctcactgaac
tcttga
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