Cyprinus carpio (common carp): 109096866
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Entry
109096866 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109096866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109096866
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109096866
Protein recycling
Other Rab GTPase associated proteins
109096866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
Sulfotransfer_3
PIN_8
Syntaxin_2
RecG_N
Motif
Other DBs
NCBI-GeneID:
109096866
NCBI-ProteinID:
XP_042611172
Ensembl:
ENSCCRG00000037654
UniProt:
A0A9Q9Y029
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MNQRSERRGIHVDQSELLCKKGCGYYGNAAWQGLCSKCWREEYQRARQRQIQEDWALAEK
LQREEEAAYVSSHSSSQTQPPQSHSQQSLATFSKFEEKKTNEKTRKVTTVKKFFSPSSRT
APKKVPPEKESEKQEKEEKLQGRRESHGENLLRDLKGIFTQPWEMASPTEESHEGKAPSP
SITRQSSIETDRVSRDFVEFLKTLQKPGREVHKQSRGFIESMGNKKDLSAEELSECVQDF
YQGMSDRLLNHFKGSSEKVDRVMDQVEKYIMTRLYKSVFCPETSDDXKKDLATQRRIRAL
HWVTIQMLCVPVDEEIPEVSDSVVKAITDIIEMDSKRVPRDKLACITSCSKHIFNTIRVT
KNEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCKPFKTHDGEDGYYFTNLCCAVAF
IEKLDAQSLNLSPEEFERYMSGQASPRRQDDPAAWPQSGSRVNPALSQIHHNLKLLSNLE
KRQQQVTEGAQNLETELAEWQDSVAREVQEILERYPLEIKPRASAIDAENVENDRLPPPL
QPQVFAG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcgctcggagcgacgggggatccatgtggaccaatcagaactgctgtgtaag
aaaggctgcggttactatggcaatgctgcatggcagggcctatgttccaagtgctggagg
gaggagtaccagagagctcggcaaagacagatccaggaggactgggctctggctgagaag
ctgcagcgagaagaggaggcagcttatgtcagcagtcacagttcctctcagacccagcct
ccacagtcccactctcagcaatctcttgccaccttctccaagtttgaagagaagaaaacc
aacgagaagacccgtaaggtcaccaccgtaaagaagttcttcagcccctcctcccgcacg
gcccctaaaaaagtcccccctgaaaaagaaagcgagaaacaagagaaagaggagaagttg
cagggcaggagggagagccatggagaaaacctcctgagggatctgaagggcatttttacc
caaccctgggagatggcctcccccactgaagagagccacgagggtaaagcgcccagtccc
tccattacccgtcagtccagcatcgagactgatcgcgtgtcacgagactttgtggagttc
ctcaagaccttacagaagcctggcagagaggtccacaagcagagccgtggtttcatagag
agtatgggaaataaaaaggatctcagtgctgaagagctgtctgagtgtgtgcaggacttt
tatcagggcatgtctgaccgactcttgaatcattttaaaggctcctctgagaaagtggat
agagtaatggaccaagtggaaaaatacatcatgactcgactctacaagagtgtcttctgt
ccagagacctcagatgattagaaaaaagacctggccacccagcgcaggattcgggcctta
cactgggtaaccattcagatgttgtgtgttcctgtggacgaggagatccctgaggtttct
gatagtgtagtcaaagccatcaccgatatcattgagatggactccaagcgtgtgcccagg
gataaactggcctgcatcaccagttgcagcaagcatatctttaacaccatcagagtcacc
aagaatgaaccagcttctgcagatgacttcctacccaccctcatttatattgtgttgaag
gcgaacccgccacggctgcagtccaacatccagtacatcacacgtttctgcaaacccttc
aagactcatgacggagaggacggatactacttcaccaacctatgctgtgccgttgccttc
atagagaagctggatgcccagtcgttgaatctcagtcctgaggaatttgagcgttacatg
tccggtcaggcttcccctcgacgacaagacgatcctgcagcctggccccagagtggttcc
cgtgtcaacccagcacttagccagatccatcataacctcaagctcctatccaaccttgag
aaaagacagcagcaggtcaccgaaggggcgcagaacctggagaccgaactggcagaatgg
caggacagtgtggcccgcgaggtgcaggaaatcctggagcggtacccactggagatcaaa
ccacgagcatctgcgatcgatgcagagaatgtggagaacgacaggctgccaccacccctt
cagccacaagtgtttgcgggttag
DBGET
integrated database retrieval system
