Cyprinus carpio (common carp): 109096955
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Entry
109096955 CDS
T05134
Name
(RefSeq) spermatogenesis-associated protein 13-like isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109096955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109096955
Membrane trafficking [BR:
ccar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109096955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_2
SH3_1
PH
SH3_9
Motif
Other DBs
NCBI-GeneID:
109096955
NCBI-ProteinID:
XP_042570290
Ensembl:
ENSCCRG00000015594
UniProt:
A0A9Q9VSB0
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All DBs
Position
A24:complement(15592244..15611969)
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AA seq
1247 aa
AA seq
DB search
MIKAPSSDPQGPSHNNDLQSDPYTDEQLMNPSLRSGCTVHMQPVLSEPCFEENRLNRLNS
QAQTVPVIADGQAKLYPSRAVRLFPTQTKCEDNASLRGPPVTPQAWSGLSSFRVMGSFKK
LRTSVFQGIQNRSNAMAAGQERNLSSMIEDGSSFLVTKRDIATSQIQETDKVSNGTTRTR
KTSSVSDEEDVCGFQRNSHFSQSIRKAYGAGRISLLDLVKTESPTTSEPDPSSTVESIVP
CKNLETQENVNVLKRLSKSADNLHVFKGHFKHNVTSAEPQNPECPSTIILQRTTSSSSAD
LQEHDSGRRQSPLRTRGRLQKLVGSLTDLSVKRKNMPDPSPRVSLSPFSQLHDDYSRRTP
CVPLSGRQRRPSPTPSKAQQNNTHHHIPKLHPAPSCPAVFSSTLNDSLEPPIKTTALISD
YVQVAVSSTDLCLDAPVCPLEEYCEPMECHQNGINNHYSQMPKQCSSPSQKQTMVNGGNV
NLECLWTEERETDDLEASSDITKAFLKSDEISTAASSPVTNTCSSESPLVTPTTPISPPF
ASDSPVSVVARKRAGRSRPRPVSDYDQLASSKYCIPEEDREYETMDYTSQKDYNTNSSYT
ESNRPENGHVCTQTESRKRRPISVIGGVDLFSSPTAEQKDDTESLPSPVSRPPVPSHRVP
PYRAMSARLRPCVFSQSTPIGLDRMGRHKVRRVLSDGSCDPMLDDSVSEEDGSCEELTEG
TPYLQSEVDLFTLNQYIQSGHAVYAEALWDHVTMEEQELAFKAGDVIRVLDVREQDWWWG
AVGDHEAWFPSSFVRVRVNQEDSSSDSVEIAPDADESVPSDAHKQNSQHRQQMRANVVKE
IMDTERVYIKHLKDICEGYIRQCRKHPGMFTDAQLKTIFSNIEDIYRFQRKFLKELEKKY
NTENPHLSEIGSCFLQQEDGFSIYSEYCNTHPVACTELQRLMKQSRYKHFFEACRLLQQM
IDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDYSGVCAAHKAMKNVASLINERKRR
LESIDTIAHWQVAILHWAGDDVLTRSSELIHSGELTRIVRPSKTQQRSYFLFDHQLVFCK
KDVLRRDLLHYRGRMDTDLLEPIDLPDGRHAQLGLLKNAFLLRHAENLNVLCVLCCKKSQ
DKQRWLQAFARERRRVQEDQEMGMEITEAQRKQAVHNARKSKQGKMKKMNYSDHPLPPHH
QPLHPLHQRHVTVPTSIPQQQVFSLAEPKKKPSHLLYSLARSALFRK
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgataaaggcaccttcgtcagacccacagggcccctctcacaacaatgacctgcagagt
gacccttacacagatgagcagctgatgaatccaagtctgaggtctggttgtacagtccat
atgcaaccagtcctgtccgagccttgctttgaggagaaccggcttaacagactgaattct
caggcccagactgttcctgtgattgccgatggccaggccaaactgtatccctccagggct
gtgcgtctgtttcccacccagacaaaatgtgaggacaatgcttcgctcagaggaccaccc
gtcacaccacaggcttggtctggattgtctagtttccgtgtcatgggttctttcaaaaaa
ctgcggacttctgtattccaaggaatccagaaccggagcaatgcgatggcagccggtcag
gagagaaatctgtcctccatgattgaggatggcagtagttttttagtaaccaaacgagac
attgcaaccagtcaaatccaggaaactgacaaagtgtcaaatgggacgactcgaaccaga
aagacgtcttcggtttcggatgaagaggacgtgtgtgggtttcagaggaattcccatttc
tctcagagtatccgcaaggcttatggggcaggacggatctcattgcttgacttagttaag
acagagagcccaactaccagtgagcctgaccccagcagcactgtggagtccatcgtacct
tgcaagaaccttgagactcaagaaaatgtcaatgttctcaaaagactaagcaagagtgca
gataatctccatgtcttcaagggtcattttaaacacaatgtcacctcagctgagccacag
aacccagaatgccccagtactataattcttcagaggaccaccagttcttcatcggctgac
ttgcaggaacatgactcaggtagacgtcaaagccccttgaggacacgtggacgtctgcaa
aaacttgttggtagtttaactgacctgtcagtcaagcgtaaaaacatgccagacccctcc
cccagagtatctctgtcacctttcagtcagctacatgatgactactcccgcagaacccca
tgtgtaccattaagtgggcgccagcggaggccttcacccacacccagcaaggcccagcag
aacaacactcaccatcacatcccaaagttacaccccgcaccctcctgtcctgctgtcttt
agttccactctaaatgactctttggagcctcctatcaaaacaacagccctaataagtgac
tatgttcaggtagctgtttcctcgacagatttgtgtttagatgccccagtctgtccactg
gaagaatactgtgaacctatggaatgccatcaaaatggaataaataaccactactctcaa
atgcccaagcagtgctcaagccccagtcaaaaacagacaatggtcaatggtggtaacgtt
aacttggagtgtctatggactgaagagagagagactgatgatcttgaggcttcatcagat
atcacaaaagcgtttctcaaaagtgatgagatctcaaccgctgcttcttcacctgtcaca
aacacctgttcctcagaatcccccctggtaactccaacaacaccaatctctccacccttt
gccagtgactctcccgtttctgtagtggccaggaaaagggcaggtcgctccagaccccgg
ccagtgtctgactatgaccagctggccagctcaaaatactgcatcccagaggaggacagg
gagtatgagactatggactacacatcccagaaggactacaataccaatagcagctacaca
gagagtaacagacctgagaatggtcatgtttgcactcaaacagagagcagaaagagacgt
cccatctctgttattggaggagtggatctgttttcatcaccaactgctgagcagaaggac
gacactgaaagcttgccttctccggtatctcgtcctccagttccctctcacagagtgcct
ccataccgggccatgtctgcccgcctgagaccctgcgtcttctcccaaagcacacctatc
ggtctggataggatgggccggcacaaagtgcgcagagtgctcagcgatgggagctgtgat
ccaatgcttgatgacagtgtgagtgaggaggacggcagctgtgaagaactgactgaagga
acaccatatctccaatcagaagtcgaccttttcactctcaatcagtatatacaatcgggt
catgccgtgtatgcagaggctctgtgggaccatgtcacaatggaagagcaggagctggcc
tttaaagccggggatgtgatccgggttctggatgttcgggagcaggattggtggtggggg
gcggtgggcgaccacgaggcctggtttccctccagctttgtgcgagttcgggtgaatcag
gaggattccagcagtgatagtgtggaaatcgcaccggatgcagacgaatccgtcccatca
gatgcacataaacaaaactcgcagcacagacagcagatgagagccaatgtggtcaaagag
atcatggacacagagcgcgtttacatcaaacatctcaaagatatctgtgagggatacatc
cgtcagtgtagaaagcaccctggcatgtttacagatgcacagctaaaaacaatcttcagc
aacattgaggacatctacaggttccagcgaaagtttctcaaggagctagaaaagaaatac
aacactgaaaaccctcatctcagtgagattggctcctgcttccttcaacaggaggacggt
ttctccatatattcagaatactgtaacacacatccagtggcatgcactgaattgcagcga
ttgatgaaacaaagcagatataaacacttcttcgaagcctgtcgtctcttacagcagatg
atcgatatctccattgctggcttcctactcacacctgtacagaagatttgtaaataccct
cttcagctgggagagcttttgaaatacacacccaaagaccacagtgactactcaggggtg
tgtgctgcacacaaagcaatgaagaatgtggcaagtctgataaatgagagaaaaaggcga
cttgagagcatcgacaccatcgctcactggcaggtggccatcctccactgggcgggtgat
gatgtgttaacacgaagctctgagctcatccactccggcgagttaacgcggatagtgcgg
cccagtaagacgcagcaacgcagctacttcctgtttgaccaccaactggtgttctgtaag
aaagacgtcctgcggagagacctgctacactaccgtggtcgtatggacactgacctactc
gagccaatcgacctgcctgatggacggcacgctcagctgggcctcctgaagaacgcattt
ctcctgcggcatgcagagaacctgaatgtgctgtgtgtgttgtgctgcaaaaagagccag
gacaagcagcgatggctgcaagcgtttgctcgagagcgcagacgggtacaggaagaccaa
gagatggggatggagattactgaggcccagaggaagcaagccgttcacaacgccaggaaa
tctaaacaaggaaaaatgaaaaaaatgaattattctgatcatcctctgcctcctcaccat
cagccgctacatcctctccatcagcgacatgtgactgtgccaaccagcatcccccagcag
caggtcttctctttagcagagccaaagaagaagccatctcacctgctgtactcacttgca
cgcagtgccctcttcaggaaatga
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