Cyprinus carpio (common carp): 109096994
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Entry
109096994 CDS
T05134
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109096994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109096994
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109096994
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109096994
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
109096994
NCBI-ProteinID:
XP_042609400
Ensembl:
ENSCCRG00000032983
UniProt:
A0A9Q9XY10
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Position
B25:complement(14632648..14645919)
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AA seq
520 aa
AA seq
DB search
MFSAQRKKFGEGVESDYPDESIYYAQTSMFPHRSEKDMLPSPSPSSSSQLSQLGASLYGP
QSTLGFSIRGMSNNNPQLNRNLTQGTQLPSHSTPTTGVPTMSLHTPPSPNRGILPMNSRN
MMSSQVGQGMGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGMGRS
QGFGMNSLSNNIFNGTDGSENVTGIDLSEFPALADRSRREGNGNPTPLHNPLAGRAPYVG
MVTKPSNEQSQDFSIHNEDFPALPGPNYKDPTLSTDESKSSLNSSGKGSSSADGPKFPGD
KTSSAQNNNQQKKGIQVLPDGKVTNIPLGMVTDQFGMIGLLTFIRAAETDPGMVHLALGS
DLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYG
EDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTYY
FFDCHNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgcacagagaaagaagtttggggagggggtcgaaagtgactaccctgacgag
agcatatactatgcccagacttcaatgttcccgcatcgatcggagaaagacatgctgcca
tctccctcgccgtcatcgtcaagtcaattgtcacagcttggtgcgagtttgtatggtccg
caaagtacactaggtttctcaataaggggcatgagcaacaacaaccctcaactgaaccgg
aatttaacacaaggcactcagttaccgagccatagcactccgacaacaggcgtcccaaca
atgtccctccacacaccaccttcgccgaacaggggcatcctgcctatgaactccaggaac
atgatgagttcgcaggtagggcagggcatgggcatgagtggcaggaccaacagcatgggc
agctctggcctgggtagccctaaccgcagctctcccagcattatctgcatgcccaagcag
cagccagcacgccagccattcaccatcaacagtatgtcaggatttggaatgggccggagc
caggggtttggcatgaactccttatccaataacatcttcaacgggacagatgggagtgaa
aatgtgacaggaatagacctctcagaattcccagcacttgcagacagaagtcggagggag
ggaaacggcaacccaacaccgttgcataatccgctggctggaagggcaccctatgttgga
atggtcacaaagccatcgaacgaacagtcgcaggacttttccattcacaacgaagacttc
ccagccctgcccgggcccaactacaaggacccaacattgagcacggatgaaagcaaatca
agcttgaactcttcaggaaagggcagctcaagtgcagatggacccaagtttcccggcgac
aagacatcatcagcacagaataataaccagcaaaagaaggggatccaggtgttgcctgat
ggcaaggtaacaaacattcccttaggaatggtgacggatcagtttggaatgattggactc
ctgacgttcatccgggcagctgagacggaccctgggatggttcacctggctttaggaagc
gacctaacaacgctaggactcaacctcaactctccagagaatctgtatcccaagtttgca
tctccctgggcttcagctccatgtcgaccacaagacattgacttccatgttccctcagag
tacttaaccaacattcacataagggacaagctggctgcaataaaactgggacgatacggt
gaagacctgctgttttacctctactacatgaacggaggagacctcttacaactcctcgct
gctgttgagctctttaaccgggactggcggtaccataaagaggaaagggtttggatcaca
agagcacctggcatggagcccacgctaaagaccaacacctacgagagaggaacatactac
ttctttgattgtcataactggaggaaggtcgctaaggagtttcatctggaatacgacaag
ctagaggagcggcctcacgtgccaactaccttcaattacaatccggcccagcaggccttc
tga
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