Cyprinus carpio (common carp): 109097000
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Entry
109097000 CDS
T05134
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP-like
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109097000
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109097000
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109097000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-RING_5
WEMBL
Crescentin
zf-C3HC4_4
zf-RING_Vps41
DUF3584
Lzipper-MIP1
FmiP_Thoc5
Fez1
Zn_ribbon_8
HIP1_clath_bdg
PUMA_CC
zf-RING-like
DUF2968
KxDL
DUF1664
ATG16
T3SSipB
KASH_CCD
GAS
zf_RING_Vps8
ANIS5_cation-bd
FANCL_C
zf-RING_16
LRRFIP
RINGv
RING_XB3-XBAT31
Prok-RING_4
zf-UDP
MscS_porin
CC2-LZ
DUF948
SLX1_C
Fib_alpha
APG6_N
TPR_MLP1_2
MAD
THOC7
CENP-F_leu_zip
Laminin_II
Motif
Other DBs
NCBI-GeneID:
109097000
NCBI-ProteinID:
XP_042622597
Ensembl:
ENSCCRG00000017325
ENSCCRG00000023854
UniProt:
A0A8C2A4D8
LinkDB
All DBs
Position
A11:complement(19120059..19124889)
Genome browser
AA seq
453 aa
AA seq
DB search
MPIRAYCTICSDFFDNSKDVAAIHCGHTFHYVCLLQWFQSAPNKTCPQCRKQVSTRHIIN
KLFFDIAPEEDGTPADPESLQNELDRMKAVLSEKEKEWRDKQKSVDTLKDTIERQKKDLE
RLRKEIGDKEMLCSVLRKQMNFLESQKNEGQAAKEEAKRLRVKMKTYESLDVVLQGQRSE
VEAMITDMGVGQSAVEQLSIYCISLKKEYDNLKGSLKSSNEMCEKLKRELFSSNSKLQKA
TAETNGTKEDMKALQKDLSNADKEITSLKKKVEILQRTLSTPTRTNEAISRLVFESPAPL
ELKPPGHGLMTDSQEIDLNLTFDINTPEQVERKPVQVPSKKMRLDTSVSSSKNMENALGR
SNSRVKEDDVMMGPMLRNSLLFRKNTLGSMLDPCKFGTVRSGYDGLGGRAKFIQPSPLSE
IRPLAMKSKRKKVSRPVTSKPTSSLTTLDGFLE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcccattcgagcatattgcaccatctgctcagatttctttgataattccaaagatgtg
gctgcaattcactgtggtcacacttttcattatgtctgtcttctccagtggtttcagtcg
gccccaaataaaacctgtccccaatgcaggaaacaggtcagtacgcggcacattatcaac
aagctgttctttgacatagcaccagaggaggatgggacgccagcagatcctgaaagttta
cagaatgagcttgatcgcatgaaagcagtgctgtctgaaaaagagaaagaatggagggac
aagcagaagtcagtagacactctaaaagacacaattgagaggcagaagaaggacctggaa
agactccggaaggaaatcggagacaaagagatgctgtgttctgtcctccggaaacagatg
aatttcttggagagtcagaaaaatgaagggcaagcagccaaagaggaagccaagcgactc
cgggtcaaaatgaaaacctatgaaagtttagatgtggttctacagggtcaaaggtcagag
gtggaggccatgatcactgatatgggtgttggtcagtctgctgttgaacagctgtccata
tactgcatctcacttaaaaaggagtacgacaatctgaaaggaagcctcaagtcatcaaat
gagatgtgtgagaaactaaaaagggaactgttctcttctaacagcaagttgcaaaaagcc
actgcagagacaaacggaacaaaggaggacatgaaggcacttcagaaggacctgtccaac
gcagacaaagagatcactagcttgaagaagaaggtggaaattctgcagcggacgttaagc
actccgacccgcaccaatgaggccatcagcagactggtcttcgaaagccctgctcctctg
gagctgaagcctcctggtcatggtctgatgacagactctcaggaaattgacctcaacctg
accttcgacattaacacacccgaacaggtggagaggaaacccgttcaggtgccatctaag
aagatgcgtctagacacttcggtatcgtcatccaaaaacatggaaaatgcactcgggcgt
agtaattctcgtgttaaagaagatgatgtcatgatggggcccatgttaaggaactcgctg
ctcttcagaaagaacacgttagggagcatgctggacccatgcaaattcggcactgtaaga
tctggctatgatggacttggaggaagagccaaatttatccaaccttctcctttatctgag
attcgaccccttgccatgaagtccaagaggaagaaggtgtccaggcccgttacaagcaag
cccacctccagcctgaccactctggatggtttcttggaataa
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