KEGG   Cyprinus carpio (common carp): 109097000
Entry
109097000         CDS       T05134                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP-like
  KO
K11985  TRAF-interacting protein [EC:2.3.2.27]
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccar04121]
    109097000
Enzymes [BR:ccar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109097000
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109097000
SSDB
Motif
Pfam: zf-RING_2 CEP135_TSGA10_CC zf-C3HC4_2 zf-C3HC4 zf-rbx1 PII1_coiled_coil zf-C3HC4_3 Rod_CreS zf-RING_UBOX zf-RING_11 zf-ANAPC11 zf-RING_5 WEMBL zf-RING_Vps41 zf-C3HC4_4 CCDC39 CCDC171 CCDC170_1st LEKR1 ODF2_C FAR1_N DUF3584 Lzipper-MIP1 FmiP_Thoc5 CCDC18_2nd Fez1 Zn_ribbon_8 ODF2_N PUMA_CC zf-RING-like zf-RING_16 HmpF DUF2968 HIP1_clath_bdg DUF1664 KxDL ATG16 zf_RING_Vps8 LRRFIP T3SSipB KASH_CCD Par-4_C FANCL_C T1-F ZapB_rel RINGv zf_RING_Vps8_fungal TPR_MLP1_2 RING_XB3-XBAT31 CC_Bre1 U-box_ZFPL1 THOC7 EzrA Prok-RING_4 SLX1_C zf-UDP Phage_scaffold MscS_porin CC2-LZ MAD FKBP15 CENP-F_leu_zip
Other DBs
NCBI-GeneID: 109097000
NCBI-ProteinID: XP_042622597
Ensembl: ENSCCRG00000017325 ENSCCRG00000023854
UniProt: A0A8C2A4D8
LinkDB
Position
A11:complement(19120059..19124889)
AA seq 453 aa
MPIRAYCTICSDFFDNSKDVAAIHCGHTFHYVCLLQWFQSAPNKTCPQCRKQVSTRHIIN
KLFFDIAPEEDGTPADPESLQNELDRMKAVLSEKEKEWRDKQKSVDTLKDTIERQKKDLE
RLRKEIGDKEMLCSVLRKQMNFLESQKNEGQAAKEEAKRLRVKMKTYESLDVVLQGQRSE
VEAMITDMGVGQSAVEQLSIYCISLKKEYDNLKGSLKSSNEMCEKLKRELFSSNSKLQKA
TAETNGTKEDMKALQKDLSNADKEITSLKKKVEILQRTLSTPTRTNEAISRLVFESPAPL
ELKPPGHGLMTDSQEIDLNLTFDINTPEQVERKPVQVPSKKMRLDTSVSSSKNMENALGR
SNSRVKEDDVMMGPMLRNSLLFRKNTLGSMLDPCKFGTVRSGYDGLGGRAKFIQPSPLSE
IRPLAMKSKRKKVSRPVTSKPTSSLTTLDGFLE
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgcccattcgagcatattgcaccatctgctcagatttctttgataattccaaagatgtg
gctgcaattcactgtggtcacacttttcattatgtctgtcttctccagtggtttcagtcg
gccccaaataaaacctgtccccaatgcaggaaacaggtcagtacgcggcacattatcaac
aagctgttctttgacatagcaccagaggaggatgggacgccagcagatcctgaaagttta
cagaatgagcttgatcgcatgaaagcagtgctgtctgaaaaagagaaagaatggagggac
aagcagaagtcagtagacactctaaaagacacaattgagaggcagaagaaggacctggaa
agactccggaaggaaatcggagacaaagagatgctgtgttctgtcctccggaaacagatg
aatttcttggagagtcagaaaaatgaagggcaagcagccaaagaggaagccaagcgactc
cgggtcaaaatgaaaacctatgaaagtttagatgtggttctacagggtcaaaggtcagag
gtggaggccatgatcactgatatgggtgttggtcagtctgctgttgaacagctgtccata
tactgcatctcacttaaaaaggagtacgacaatctgaaaggaagcctcaagtcatcaaat
gagatgtgtgagaaactaaaaagggaactgttctcttctaacagcaagttgcaaaaagcc
actgcagagacaaacggaacaaaggaggacatgaaggcacttcagaaggacctgtccaac
gcagacaaagagatcactagcttgaagaagaaggtggaaattctgcagcggacgttaagc
actccgacccgcaccaatgaggccatcagcagactggtcttcgaaagccctgctcctctg
gagctgaagcctcctggtcatggtctgatgacagactctcaggaaattgacctcaacctg
accttcgacattaacacacccgaacaggtggagaggaaacccgttcaggtgccatctaag
aagatgcgtctagacacttcggtatcgtcatccaaaaacatggaaaatgcactcgggcgt
agtaattctcgtgttaaagaagatgatgtcatgatggggcccatgttaaggaactcgctg
ctcttcagaaagaacacgttagggagcatgctggacccatgcaaattcggcactgtaaga
tctggctatgatggacttggaggaagagccaaatttatccaaccttctcctttatctgag
attcgaccccttgccatgaagtccaagaggaagaaggtgtccaggcccgttacaagcaag
cccacctccagcctgaccactctggatggtttcttggaataa

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