Cyprinus carpio (common carp): 109097119
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Entry
109097119 CDS
T05134
Name
(RefSeq) homeobox protein orthopedia B-like isoform X2
KO
K24901
homeobox protein orthopedia
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109097119
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
109097119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109097119
NCBI-ProteinID:
XP_018966338
Ensembl:
ENSCCRG00000035453
UniProt:
A0A9Q9VF15
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All DBs
Position
A5:complement(27548446..27552352)
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AA seq
314 aa
AA seq
DB search
MLSHADLLDTRLGMKDAAAELLGHREALKCRLGGTDSGHPGDLTSATETVEGTTLLPGED
ISNGGSNPTGMQQVNAKDQEKQQQQVSNNQSGGQQNQQKQKRHRTRFTPAQLNELERSFA
KTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTHGLPHF
PSAAAMGDGLCSFHANDTRWAAAGMPGVSQLQIPPALGRQQAMAQSLSQCSLGAGPPPNS
MGLSSSLSSNGSGLQSHLYQPTFPGMVPASLSGPTNVSGSPQLCSSPDSDMWRGTSIASL
RRKALEHTVSMSFT
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgctctctcatgccgacctcttggatactcgcctcgggatgaaggatgctgcagccgag
cttctcggacaccgagaggctttgaaatgcagactaggggggactgactctggacatccc
ggcgatcttacttctgctacagagactgtagaagggaccactctgctccccggggaagat
ataagcaatggtggatccaatcctactggaatgcagcaggtcaacgccaaagaccaagaa
aagcagcaacagcaagtctctaataatcagtcgggtggccagcaaaaccaacagaaacag
aaacgccacaggacccgctttactccagcgcagctgaacgaactggaaaggagctttgct
aaaacccactaccctgatatcttcatgagagaggaacttgcattacggattggtttaacg
gagtcacgggttcaggtatggttccagaatcgacgtgcaaaatggaagaagcgcaagaag
acaaccaacgttttccgggcgccgggtactttgctgccaacacacggtttgcctcacttt
ccgtctgcggccgcgatgggcgacggtctttgctcttttcatgccaacgacacgcgctgg
gccgcggcggggatgcccggagtctcacagctgcagataccgcctgcgctgggccgacag
caggcgatggcacagtccctgtcccagtgcagtctcggagctggccccccaccaaactcc
atgggcctttccagcagcttatcgtcaaatggttccggtcttcaatcgcatctgtatcaa
cccacatttccagggatggtgcctgcttccctctcgggtcccacgaatgtgagcggctca
cctcagctgtgtagctccccggacagtgacatgtggagagggactagtatcgcttccctg
cgccgtaaagcacttgagcacaccgtttcgatgagtttcacctaa
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