Cyprinus carpio (common carp): 109097253
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Entry
109097253 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109097253
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109097253
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
Pre-60S particles
Helicases
109097253
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
Helicase_C_2
SBF_like
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109097253
NCBI-ProteinID:
XP_042589204
Ensembl:
ENSCCRG00000008626
UniProt:
A0A9Q9WTB4
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All DBs
Position
B10:21948295..21957235
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AA seq
595 aa
AA seq
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MENFSDGKWEHLPVKLHDCILQTLRELKFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKT
LAFVIPALEIPLKREEKLKKMQVGALIVKHTRVMWLWIXEVLWGFLWGFFKFRQILLIGG
SNPIEDVEKFKTQGANIIIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMG
FEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASSVQKTPA
RLSNYYTICRAEEKFNTLVAFLRQHKHEKQLVFFSTCACVEYFGKALEVLIKNVSIHCIH
GKMKHKRNKIFADFRALKSGILVCTDVMARGIDIPEVNFLIKFNAPFISSFVHRCGRTAR
IGNQGNALVFLLPMEESYVNFLSINQKCPLQTYPPVKDVVDVLPKLKAMALGDRAMFEKG
MKAFVVCQAYAKHECSLIFRIKDLDFAALARGFALLRLPKMPELRGKTFPDFKQEAIDTD
SIRFKDNNREKQRQKRLAELKEREMPFKKNFIKNKAWSKQKNKKDKKKKKAAKRKLDEEP
DVDDEDVNELLNDTRLLKKLKQGKISEEDFDKHMSSAGSSHPKRADANSSDGDGE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactttagcgatggaaaatgggagcatttgcccgtgaaattacatgactgcata
ttacagactctcagggagctgaaatttacacacatgactcctgttcagtctgcctgtatc
cctctttttatgagtaataaagatgtggctgctgaagccgtgactggcagcgggaaaacc
ttggcatttgtgattcctgcgttagaaatccccctaaagcgagaagagaagttaaaaaag
atgcaggtcggtgcattgatcgtaaaacacacacgtgtgatgtggctgtggatatgagag
gtgttgtgggggtttttgtgggggtttttcaagtttagacagattcttttaattggtgga
agcaaccctattgaggatgtagagaagtttaagactcagggagccaatatcataattgcg
acccctgggcgactggaggacatgttcaggaggaaggccgatgggcttgatctggccacc
gctgtgaagtctctggatgttcttgtcctggatgaagcagacagattactggacatgggc
tttgaagccagtttaaacactattctggggtatttacccaagcagcggcgcacagggctt
ttctctgccacacagacgcaagagctggagaagttggtgagggctggtctgcgcaaccct
gtgagaatcacagtgaaggagaaaggtgtggcggcctcgagcgtgcagaaaacaccagcc
agactcagcaactattacacgatatgtcgagcagaggagaagttcaacactttagtggcg
tttctcaggcagcacaaacatgagaagcagctcgtgttcttcagcacctgcgcctgtgtg
gagtacttcggtaaagccctggaagtcttgatcaagaatgtcagcatccactgcatccac
gggaagatgaagcataaacgaaacaagatctttgcagatttccgggcgctgaagagtggg
attctcgtgtgcacagatgtcatggcgagaggcatcgacataccagaagtgaattttctc
atcaaatttaatgctcctttcattagttcctttgtgcatcggtgtggacgaacggcacgg
atcggaaaccagggcaatgcactcgtctttcttctgccaatggaagagtcgtatgtaaat
ttcttgtccattaatcaaaagtgtcctcttcagacgtatcctccagtgaaagacgtggtt
gatgttctgcctaaactgaaggcgatggctttaggtgacagagcgatgtttgagaagggc
atgaaagcctttgtcgtgtgtcaggcctacgccaaacacgagtgtagtctgatatttcgc
attaaagacctggattttgctgctctggcccggggctttgctctcctccgtttgcccaaa
atgcctgaactgagaggaaagaccttcccagacttcaaacaggaggccatcgacacagac
tccatccgctttaaagataataacagagagaaacagagacaaaaaagactggcggagctg
aaagaaagagagatgccgtttaagaagaacttcatcaagaacaaagcctggtcgaagcag
aagaacaagaaggataaaaagaaaaagaaggccgccaaaagaaaactggatgaggaacca
gatgttgacgacgaagacgtaaacgagcttttaaatgacacgcgtctgctgaagaaactc
aagcaaggaaagatcagtgaagaggactttgacaagcacatgagttcagcgggcagctca
catcccaaacgagcagatgcaaacagttctgatggagacggagaatga
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