Cyprinus carpio (common carp): 109097464
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Entry
109097464 CDS
T05134
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109097464 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
109097464 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109097464 (pdlim5b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109097464
NCBI-ProteinID:
XP_042589244
UniProt:
A0A9Q9WTG6
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Position
B10:23469707..23562746
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AA seq
624 aa
AA seq
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MRKWLADSVFVKFRERVSAVNWTLAVPSTVTRSTMSNYSVSLTGPSPWGFRLQGGKDFSM
PLTISRLTEGGKAVKAKISVGDVVLSIDGIATDGMTHLEAQNKIKACTGNLNLSLLRSSS
ITKTETSKEEPQEIIKPVPISQAPGASTGPASVAYNKTARPFGGTTNTVRSVSPKASIPS
ASSAFTPAAPSQQPGSAPKPTSGHSPFANSSSTPSSGSSSPARMMAPPPAPVAPHSSVYN
TPINLYSNENVCEVALGQRRGLLESKATGEQHNGKTPPRTARKPVLDPEGNHVSALGDAS
KKRVIEDTEDWHPRTGTSQSRSFRILAQITGTENEQAQENRPGKNEAAEELQPSSHATSS
VKTVSKASSGAPQQGNGVPPAAAKSHQSSSAAGFPKAGAPVPQTGPSIGRVSSKGPDRPT
PQAHPSDGDDSLVQRAEHIPAGTRTPMCGHCNMVIRGPFLVAMGKSWHKEEFNCCHCRSS
LADVGFVEERGSVYCERCYEQFLAPTCFRCQQKVLGEVINALKQTWHVNCFLCTACQQPI
RNNTFHLEDGQPYCETDYYTLFGTSCHGCDFPIEAGDKFLEALGFTWHDTCFVCTVCSMS
LEGQTFFSKKDKPLCKKHAHTVQF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagtggttagccgatagtgttttcgtaaagtttcgagagagggtgtcagctgtc
aattggactttggcagtaccttcaacagtgacccgctccaccatgagtaactacagcgtg
tccttgaccggaccttcaccctggggcttcagactacaaggtggcaaggacttcagcatg
cctctcaccatctccagactgacagaaggaggaaaggcagtgaaagccaagatcagcgtc
ggggatgttgtgctgtctatcgatggcatcgccacagacggaatgacacacctggaagcc
cagaataaaatcaaagcctgtacaggaaacctgaacctctcgctgctgagatcttccagt
atcactaaaacagagacttcgaaggaggaaccgcaggagatcataaagccggtgcccatc
agccaagcgcccggggcctccaccggccccgccagcgttgcttataataagacggctcgg
cccttcggcggaacgactaacaccgtcagatcagtcagtcccaaagcctctatcccctcc
gcctcgtctgccttcaccccagccgctccgtcccagcagcctggctccgcccccaaaccc
acctctggtcactcccccttcgctaactcctcctccacaccctcctctggctcctcctcc
ccggcgagaatgatggctccgcccccggcccccgtcgcccctcattcgtccgtctataac
acgcccatcaacctctactccaatgagaatgtgtgtgaggtggccttgggccagaggcgt
ggcctgctggagagcaaagccactggggaacagcacaacggaaagactcctcccagaacc
gctcgtaagcccgtgctggatccggaggggaatcacgtctcagctctcggtgatgccagt
aagaagcgtgtgatcgaggacacggaggactggcacccgcgcaccggcacgtctcagtcg
cgctccttccgcatcctggcgcagatcaccggcacagagaacgagcaagctcaggagaac
cggccggggaagaacgaggcggcagaggagcttcagcccagttctcatgccacgtcttca
gtcaaaaccgtgagcaaagcgtcctctggagccccgcagcagggcaacggcgtccctcca
gccgcagccaagagccatcagtcgagcagcgccgcagggtttcccaaagcaggtgcacct
gtgccgcagacgggcccctcgatcggacgggtcagcagcaagggcccggatcgacccaca
cctcaggctcaccccagcgacggggacgattcgctggtgcagagagccgagcacatcccg
gcgggaacacgcacacccatgtgtggacactgcaacatggtcatcaggggtccgttcctg
gtggcgatgggcaaatcctggcataaggaggagttcaactgctgtcactgccgcagttct
ctggcagacgtgggtttcgtggaggagcgcggctccgtctactgcgagcgctgttacgag
cagtttctggccccgacctgcttcagatgccagcagaaggttctcggggaagtcatcaac
gccctgaagcaaacctggcatgtgaactgcttcctgtgcaccgcctgccagcagcccatc
cgcaacaacaccttccacctggaggacggacagccgtactgtgagaccgattactacacc
ctgttcggcaccagctgtcacgggtgtgacttccccatcgaagcgggcgataagttcctg
gaggcgctggggttcacctggcacgacacctgcttcgtctgtacggtgtgcagcatgagt
ctggagggtcagaccttcttctccaagaaagacaagcccttgtgcaagaaacacgctcac
accgtccagttctga
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