Cyprinus carpio (common carp): 109097466
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Entry
109097466 CDS
T05134
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04350
TGF-beta signaling pathway
ccar04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109097466
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109097466
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109097466
Cell adhesion molecules [BR:
ccar04515
]
Immunoglobulin superfamily
DCC/UNC5 family
109097466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Neogenin_C
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
Ig_Rha78A_N
fn3_SORL1
fn3_2
Unc5_NetrinR_N
SusE
FAM176
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
109097466
NCBI-ProteinID:
XP_042609592
Ensembl:
ENSCCRG00000013848
UniProt:
A0A9R0ASG1
LinkDB
All DBs
Position
B25:3738604..3862029
Genome browser
AA seq
1306 aa
AA seq
DB search
MAERGARLLVFFASLIVLRFGGADKGSGIRGFTPFRFSVEPVDTLAVRGLPAVLNCSAAS
NALVRVEWKKDGTFLNLVADDRKRQLADGSLLISTVVHSKHNKPDEGVYQCVATIDNLGT
ISSRTARLTVAGLPRFLSQPEGVSVRMGGTEMLSCEVTEELVPFTRWERDGRPVELDGRV
IQLPSGALVISNASQSDAGLYRCTIDGLGPAKTTEEAELQVSADSGVEEKLETLQGPAAV
AKVVRESVLLPCVMKGYPVPVIRWTFNGRPVDESRERFAVIGGGSLQIVNLTEEDAGIYA
CQTDSDNMTSEIQAELTVHVPPRFLTRPSNTYAQESMDIIFECDVTGSPPLTVKWMKDGD
TVIPSDYFRIVKQHNLQVLGLVKSDEGFYQCLAENEAGNVQASAQLIILDLDVALPSAVP
SLTDATTDHVASSPAERNGPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGENISYSVFYS
LEGTNRERVENTSGPGEMQVTIQNLAPDTKYTFRVVASNANGPGESSTPLTVATQLEVQV
PGPAPNLQVVSVSTASVTLSWERPSTGNGEIQTYRLFYSEKGQDLEQDMEVTGLSYTMTG
LKKFTEYSFRVVAYNKHGPGVSTEDVVVRTLSDVPSAPPQNLTLEVLNSTSIMVRWQPPP
PGTLNGELTGYKLRYRKGLRRADAIEISTTQLFQLIDGLEKGKVYTVRVSASTVNGTGPT
TEWIAAETFENDLDESQVPGVPSSLHVRPLVNRIVVSWTPPENQDILVRGYKIGYGIGSP
HAHTVTLDYKQRFYSIDDLDPSSHYVITLKAFNNMGEGIPIYNSATTRPQSDPIDPDIDF
YELFNNPYTPAPDPTPMLPPVGVQATVLSQDTVKVSWADNSLAKNQKITDSRYYTIRWKT
NIPANTKYKMANTTSLFHTVTALKPNTLYEFSVMVTKSRRSSTWSMTAHGTTFESVPSSA
PKDVTVISKEGSPRIININWQPPTEANGKITGYIIYYSTDVNAEVHDWVVEPVVGNRLTH
QIQGLTLDTTYYFKIQARNSKGMGPMSDAVQFRTPKAEPSDKMSSDQGLQVKPGHPTLPE
HGIGSNMDKPGITGSQENHILVIVVIVSVGVFTIIAVVVGAVLCTRRSNSHQKKKRAACK
SSTGSHKYKSSSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTETPIPRTAPDPAAEPSH
QRRGLEGEESVSTLAGRRGVRPKVMMPFDSQPSQPVISAHPIHSLDHLHHHHHHYHLPPR
GYLHHQIGLRAPATPSTVSDRPPSAGESAVMLSSCFSRELQKIHIQ
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggggcacggctgctcgtttttttcgcaagtctcatcgttctccggttc
ggcggtgcggataaaggttctggcatccgaggttttaccccgttcaggttctcggttgaa
cccgtcgacacgctggctgtacgcggcctccccgctgtcctgaactgttcggcagctagc
aacgctctggtgagggtggaatggaagaaggacgggacgttcctgaacctggtagcggac
gacaggaagcggcagctagcagacggctcattgctcatcagtacggtggtccactccaaa
cacaataagcctgatgagggggtgtaccagtgcgtggccaccatcgacaacctgggcacc
atcagcagccgaaccgcacgcctcacagtggcaggacttccgcggttcctcagtcagccg
gagggcgtgtcggtgcggatgggcggcactgagatgctgagctgcgaggtgaccgaagag
ctcgtcccgttcacacgctgggagagggatggtcggcccgtggagctggacggcagggtc
atacagctgcccagcggagctctggtcatcagcaacgcctcccagagcgacgccggactc
taccgctgcaccatagacggcctgggaccggccaaaaccacagaggaggcagaactacag
gtgtctgcagattctggtgttgaagaaaaactggagactctccagggcccagctgctgtg
gcgaaggttgtcagggagagcgtgttgttgccatgcgtcatgaagggataccctgtgcca
gtgattcgctggacgtttaacggccggccagttgacgagagccgtgagcgttttgctgtg
attggcggggggagcctgcagatcgtcaacctgaccgaagaggatgctgggatatatgcc
tgccagacggacagcgacaacatgaccagcgagatccaggcagagctcacagtgcacgtt
cctccacggttcctgacgagaccctccaacacttacgcccaggagtccatggacatcatc
tttgagtgtgacgtcaccggctcgccgccgctcaccgtcaaatggatgaaggatggagac
acggtcattcccagtgattatttcaggatagtgaagcagcataacctgcaggttttgggt
ttagtaaaatcagatgaaggtttttatcagtgtttagcggagaatgaagccgggaacgtc
caggcgagcgctcagctgatcatactggatttagacgttgcccttccttctgctgtccct
tcactgaccgatgccactactgaccatgtagcgtccagcccagccgagcgcaacggcccg
acgccctccgccccgcgtgatgtcgtagcatctctggtgtccacccgattcatcaagctg
acgtggcgacttcctgccgagccgcacggggagaacatctcctactctgtgttctacagt
ctggaaggcactaacagggagcgtgtggagaacaccagcggaccgggagagatgcaggtc
accatccagaacctcgcccccgacaccaagtacacctttcgggtggtcgcgtccaacgct
aacggcccgggagagagttccaccccacttacagtggccacccagctggaggttcaggtc
ccgggtccggctccgaatctgcaggtggtctctgtcagcactgcctcagtcacgctgagc
tgggagagacccagcactgggaacggcgagatccagacctacagactcttctacagcgag
aagggacaagacttggagcaggacatggaggtcacaggtctgtcctacaccatgacgggc
ctcaagaagtttacagagtacagtttcagggttgtggcgtacaacaaacacggccccggc
gtctccaccgaggatgttgtggtccggacgctgtctgacgtgccgagcgccccgccgcag
aacctcactctggaggtcctgaactcaacgagcatcatggtccgctggcagccgcctccc
cctggtaccctgaacggagagctgacggggtataaattacgctaccggaaaggactcagg
agagcagacgcaatagagatctcaaccacacagctcttccagctcattgacggtctggag
aagggaaaggtgtacactgtgagagtgtcggcctccacagtgaacggaaccggacccaca
accgagtggatcgcagccgaaaccttcgagaacgacctggacgagtctcaggttccagga
gtgccgagttctcttcatgttcgtccgctggtgaaccgaatcgtggtgagctggactcct
ccagaaaaccaggacattttagtgcgaggttataagatcggctacgggatcggcagccct
cacgcccacacggtcactctggattacaagcagcgcttctacagcatcgatgacctcgat
cccagttcccattacgtcatcaccctcaaggcgttcaacaacatgggcgaaggcattccc
atctacaacagcgccacgaccagacctcaatccgaccccatagaccctgatattgatttt
tatgaactctttaataacccatacaccccagcacctgaccccacacccatgctgcccccg
gtgggcgttcaggccaccgtcctcagccaggacactgtcaaagtcagctgggccgacaac
tcgctcgccaagaaccagaagatcaccgactccagatattacaccatccgctggaagacc
aacatccccgccaacaccaaatacaagatggcaaacaccacgtctctgtttcatacggta
acggctctgaagcccaacacactttatgagttctctgttatggtgaccaagagccgcagg
agcagtacatggagtatgacggcccacgggaccacctttgagtccgtacccagctctgct
ccgaaagatgtgactgtgatcagtaaagagggaagtcctcgaatcatcaacatcaactgg
cagcctccgactgaagccaacggcaaaatcacagggtacatcatctactacagcactgat
gtgaacgccgaggtccatgattgggtggtggagcccgtggtggggaacagactgacacat
cagattcaggggctgacgctggacaccacatactacttcaagatccaagcgaggaactcc
aaaggcatgggacccatgtcagacgcagtgcagttccgcacccccaaagctgaaccatca
gacaaaatgtcaagtgatcaagggctgcaagtcaaacccggtcacccgactctaccggag
cacgggattggatcaaacatggataaaccaggcatcacgggcagccaggagaatcatatt
ctggtgatcgtggtgattgtgtctgttggtgtgttcaccatcatcgctgtggtcgtgggg
gccgtcctgtgcacgcgccgctccaactcccaccagaaaaagaaacgtgcggcctgtaag
tccagcacaggctcccacaagtacaagagctcatctaaagacctgaaacctccagatctg
tggatccatcacgagcgtctggagctcaaacccatggacaaatcacccgatcccaacccg
gtcatgacagagacgcccatcccgcggaccgccccggatccagccgctgagcccagccat
cagagacggggtcttgagggagaggagagcgtgtccactttggccggtcggaggggagtg
agacctaaagtgatgatgccgttcgactctcagccttcccagcctgtgattagcgctcac
cccatccattccctcgatcatcttcatcaccatcatcatcactatcacctcccgccgcgt
ggctaccttcatcaccagatcggcctgagagcacctgccacccccagcacagtctcagac
aggcctccgtctgcaggtgagagcgcagtgatgctgtcgtcatgcttctccagggaactt
cagaagatacacattcaataa
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