KEGG   Cyprinus carpio (common carp): 109097466
Entry
109097466         CDS       T05134                                 
Name
(RefSeq) neogenin isoform X1
  KO
K06766  neogenin
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04350  TGF-beta signaling pathway
ccar04514  Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    109097466
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    109097466
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ccar04515]
    109097466
Cell adhesion molecules [BR:ccar04515]
 Immunoglobulin superfamily
  DCC/UNC5 family
   109097466
SSDB
Motif
Pfam: fn3 I-set Ig_3 Neogenin_C Ig_2 ig Pur_ac_phosph_N FN3_DSCAM-DSCAML_C Fn3_VIN3 V-set Interfer-bind Ig_Rha78A_N fn3_SORL1 fn3_2 Unc5_NetrinR_N SusE FAM176 EphA2_TM
Other DBs
NCBI-GeneID: 109097466
NCBI-ProteinID: XP_042609592
Ensembl: ENSCCRG00000013848
UniProt: A0A9R0ASG1
LinkDB
Position
B25:3738604..3862029
AA seq 1306 aa
MAERGARLLVFFASLIVLRFGGADKGSGIRGFTPFRFSVEPVDTLAVRGLPAVLNCSAAS
NALVRVEWKKDGTFLNLVADDRKRQLADGSLLISTVVHSKHNKPDEGVYQCVATIDNLGT
ISSRTARLTVAGLPRFLSQPEGVSVRMGGTEMLSCEVTEELVPFTRWERDGRPVELDGRV
IQLPSGALVISNASQSDAGLYRCTIDGLGPAKTTEEAELQVSADSGVEEKLETLQGPAAV
AKVVRESVLLPCVMKGYPVPVIRWTFNGRPVDESRERFAVIGGGSLQIVNLTEEDAGIYA
CQTDSDNMTSEIQAELTVHVPPRFLTRPSNTYAQESMDIIFECDVTGSPPLTVKWMKDGD
TVIPSDYFRIVKQHNLQVLGLVKSDEGFYQCLAENEAGNVQASAQLIILDLDVALPSAVP
SLTDATTDHVASSPAERNGPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGENISYSVFYS
LEGTNRERVENTSGPGEMQVTIQNLAPDTKYTFRVVASNANGPGESSTPLTVATQLEVQV
PGPAPNLQVVSVSTASVTLSWERPSTGNGEIQTYRLFYSEKGQDLEQDMEVTGLSYTMTG
LKKFTEYSFRVVAYNKHGPGVSTEDVVVRTLSDVPSAPPQNLTLEVLNSTSIMVRWQPPP
PGTLNGELTGYKLRYRKGLRRADAIEISTTQLFQLIDGLEKGKVYTVRVSASTVNGTGPT
TEWIAAETFENDLDESQVPGVPSSLHVRPLVNRIVVSWTPPENQDILVRGYKIGYGIGSP
HAHTVTLDYKQRFYSIDDLDPSSHYVITLKAFNNMGEGIPIYNSATTRPQSDPIDPDIDF
YELFNNPYTPAPDPTPMLPPVGVQATVLSQDTVKVSWADNSLAKNQKITDSRYYTIRWKT
NIPANTKYKMANTTSLFHTVTALKPNTLYEFSVMVTKSRRSSTWSMTAHGTTFESVPSSA
PKDVTVISKEGSPRIININWQPPTEANGKITGYIIYYSTDVNAEVHDWVVEPVVGNRLTH
QIQGLTLDTTYYFKIQARNSKGMGPMSDAVQFRTPKAEPSDKMSSDQGLQVKPGHPTLPE
HGIGSNMDKPGITGSQENHILVIVVIVSVGVFTIIAVVVGAVLCTRRSNSHQKKKRAACK
SSTGSHKYKSSSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTETPIPRTAPDPAAEPSH
QRRGLEGEESVSTLAGRRGVRPKVMMPFDSQPSQPVISAHPIHSLDHLHHHHHHYHLPPR
GYLHHQIGLRAPATPSTVSDRPPSAGESAVMLSSCFSRELQKIHIQ
NT seq 3921 nt   +upstreamnt  +downstreamnt
atggcggagcggggggcacggctgctcgtttttttcgcaagtctcatcgttctccggttc
ggcggtgcggataaaggttctggcatccgaggttttaccccgttcaggttctcggttgaa
cccgtcgacacgctggctgtacgcggcctccccgctgtcctgaactgttcggcagctagc
aacgctctggtgagggtggaatggaagaaggacgggacgttcctgaacctggtagcggac
gacaggaagcggcagctagcagacggctcattgctcatcagtacggtggtccactccaaa
cacaataagcctgatgagggggtgtaccagtgcgtggccaccatcgacaacctgggcacc
atcagcagccgaaccgcacgcctcacagtggcaggacttccgcggttcctcagtcagccg
gagggcgtgtcggtgcggatgggcggcactgagatgctgagctgcgaggtgaccgaagag
ctcgtcccgttcacacgctgggagagggatggtcggcccgtggagctggacggcagggtc
atacagctgcccagcggagctctggtcatcagcaacgcctcccagagcgacgccggactc
taccgctgcaccatagacggcctgggaccggccaaaaccacagaggaggcagaactacag
gtgtctgcagattctggtgttgaagaaaaactggagactctccagggcccagctgctgtg
gcgaaggttgtcagggagagcgtgttgttgccatgcgtcatgaagggataccctgtgcca
gtgattcgctggacgtttaacggccggccagttgacgagagccgtgagcgttttgctgtg
attggcggggggagcctgcagatcgtcaacctgaccgaagaggatgctgggatatatgcc
tgccagacggacagcgacaacatgaccagcgagatccaggcagagctcacagtgcacgtt
cctccacggttcctgacgagaccctccaacacttacgcccaggagtccatggacatcatc
tttgagtgtgacgtcaccggctcgccgccgctcaccgtcaaatggatgaaggatggagac
acggtcattcccagtgattatttcaggatagtgaagcagcataacctgcaggttttgggt
ttagtaaaatcagatgaaggtttttatcagtgtttagcggagaatgaagccgggaacgtc
caggcgagcgctcagctgatcatactggatttagacgttgcccttccttctgctgtccct
tcactgaccgatgccactactgaccatgtagcgtccagcccagccgagcgcaacggcccg
acgccctccgccccgcgtgatgtcgtagcatctctggtgtccacccgattcatcaagctg
acgtggcgacttcctgccgagccgcacggggagaacatctcctactctgtgttctacagt
ctggaaggcactaacagggagcgtgtggagaacaccagcggaccgggagagatgcaggtc
accatccagaacctcgcccccgacaccaagtacacctttcgggtggtcgcgtccaacgct
aacggcccgggagagagttccaccccacttacagtggccacccagctggaggttcaggtc
ccgggtccggctccgaatctgcaggtggtctctgtcagcactgcctcagtcacgctgagc
tgggagagacccagcactgggaacggcgagatccagacctacagactcttctacagcgag
aagggacaagacttggagcaggacatggaggtcacaggtctgtcctacaccatgacgggc
ctcaagaagtttacagagtacagtttcagggttgtggcgtacaacaaacacggccccggc
gtctccaccgaggatgttgtggtccggacgctgtctgacgtgccgagcgccccgccgcag
aacctcactctggaggtcctgaactcaacgagcatcatggtccgctggcagccgcctccc
cctggtaccctgaacggagagctgacggggtataaattacgctaccggaaaggactcagg
agagcagacgcaatagagatctcaaccacacagctcttccagctcattgacggtctggag
aagggaaaggtgtacactgtgagagtgtcggcctccacagtgaacggaaccggacccaca
accgagtggatcgcagccgaaaccttcgagaacgacctggacgagtctcaggttccagga
gtgccgagttctcttcatgttcgtccgctggtgaaccgaatcgtggtgagctggactcct
ccagaaaaccaggacattttagtgcgaggttataagatcggctacgggatcggcagccct
cacgcccacacggtcactctggattacaagcagcgcttctacagcatcgatgacctcgat
cccagttcccattacgtcatcaccctcaaggcgttcaacaacatgggcgaaggcattccc
atctacaacagcgccacgaccagacctcaatccgaccccatagaccctgatattgatttt
tatgaactctttaataacccatacaccccagcacctgaccccacacccatgctgcccccg
gtgggcgttcaggccaccgtcctcagccaggacactgtcaaagtcagctgggccgacaac
tcgctcgccaagaaccagaagatcaccgactccagatattacaccatccgctggaagacc
aacatccccgccaacaccaaatacaagatggcaaacaccacgtctctgtttcatacggta
acggctctgaagcccaacacactttatgagttctctgttatggtgaccaagagccgcagg
agcagtacatggagtatgacggcccacgggaccacctttgagtccgtacccagctctgct
ccgaaagatgtgactgtgatcagtaaagagggaagtcctcgaatcatcaacatcaactgg
cagcctccgactgaagccaacggcaaaatcacagggtacatcatctactacagcactgat
gtgaacgccgaggtccatgattgggtggtggagcccgtggtggggaacagactgacacat
cagattcaggggctgacgctggacaccacatactacttcaagatccaagcgaggaactcc
aaaggcatgggacccatgtcagacgcagtgcagttccgcacccccaaagctgaaccatca
gacaaaatgtcaagtgatcaagggctgcaagtcaaacccggtcacccgactctaccggag
cacgggattggatcaaacatggataaaccaggcatcacgggcagccaggagaatcatatt
ctggtgatcgtggtgattgtgtctgttggtgtgttcaccatcatcgctgtggtcgtgggg
gccgtcctgtgcacgcgccgctccaactcccaccagaaaaagaaacgtgcggcctgtaag
tccagcacaggctcccacaagtacaagagctcatctaaagacctgaaacctccagatctg
tggatccatcacgagcgtctggagctcaaacccatggacaaatcacccgatcccaacccg
gtcatgacagagacgcccatcccgcggaccgccccggatccagccgctgagcccagccat
cagagacggggtcttgagggagaggagagcgtgtccactttggccggtcggaggggagtg
agacctaaagtgatgatgccgttcgactctcagccttcccagcctgtgattagcgctcac
cccatccattccctcgatcatcttcatcaccatcatcatcactatcacctcccgccgcgt
ggctaccttcatcaccagatcggcctgagagcacctgccacccccagcacagtctcagac
aggcctccgtctgcaggtgagagcgcagtgatgctgtcgtcatgcttctccagggaactt
cagaagatacacattcaataa

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