KEGG   Cyprinus carpio (common carp): 109097740
Entry
109097740         CDS       T05134                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccar03041]
    109097740
Spliceosome [BR:ccar03041]
 Complex B
  Other components
   Complex B specific factors
    109097740
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st ANAPC4_WD40 LisH_TPL Beta-prop_EML WDR90_beta-prop_4th NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Ge1_WD40 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N PROPPIN Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_WDR75_2nd VPS8_N WD_LRWD1 Beta-prop_DCAF12 LisH LisH_PAC1 LisH_WDR26 DUF7165 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 109097740
NCBI-ProteinID: XP_018966897
Ensembl: ENSCCRG00000012289
UniProt: A0A9Q9VED9
LinkDB
Position
B1:30128685..30143694
AA seq 539 aa
MDLEVESADVIRLIMQYLKENNLHRTLAMLQEETAVSLHTVDSIESFISDINNGQWDIVL
LAIQYLKLPDKLLIDLYEQIVLELIELGELGAAQCLLKQTDPMIMLKHTQPERYSHLDTL
LTKPIFDSQEAYPVGSSKEKRRLAIAQAFAGEVCLVPPSRLMALLGQGRICEGALYRLQE
TKALRQFGSLAMLSLKWQQHQGLLPPGMSLELFRGKGALKDMEEERFPTQLSRLIKFGPK
SHVECARFSPDGQYLITGSVDGFIEVWNFTAGKIQKDLKYQAQDNFMMMDEAVLCLAVSH
DSDMIASGAQDGKIQVWRILNGTCLNRIERAHSKAVTCVCFNKDSSQLLSASFDQIIRLH
GLKSGKMLKEFRGHTAHINDVIFSHDGQHVISASADGTVKVWSMKTMDCTHTIKTPDIPE
GTDITVNNVVLVPKTPEHFVVCNRTNTVVVTNIHGQVMRSFCSGVREGADFVCCTLSPRG
EWIYCVGEDYVLYCFSTITGKLERTLTVHEKDVIGITHHPHQNLIATYSEDGLLKLWKP
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggaccttgaagtggaatcagcagacgtgattcgtctgatcatgcaatacctgaaggaa
aataatttgcatcgcactctggcgatgcttcaagaggagacagcagtctcgctccacaca
gtcgacagcatcgaaagcttcatctccgatatcaacaacgggcagtgggatatagtgctg
ctagcaatccagtatctgaagcttcctgacaagctgctcattgacctgtacgaacagatt
gtgctggagttgattgagttgggtgagctgggagctgctcaatgtttactaaagcaaacc
gatcccatgatcatgctgaagcacactcaacctgagcgctactcacacctggacaccctt
ctcacaaaaccaatttttgactcacaagaagcatatccagtgggcagcagtaaagagaag
cgcaggctggctatcgctcaagcttttgcaggagaggtctgtttggtgccaccttctcgt
ctcatggctcttctgggccagggccgtatatgtgagggggctttatacaggttacaggaa
accaaagcactaaggcagtttggctcattagcaatgctgtcattgaagtggcagcagcac
cagggccttttacctccaggtatgtctttggaactgttccggggcaaaggtgcattgaag
gacatggaggaagagcgcttccctactcagctcagtcgcctcataaagtttgggccaaag
tcccatgtagagtgtgcgcgattctctcctgatggacagtacttgattactggatctgtt
gatggtttcattgaagtctggaacttcactgctggtaaaattcagaaggatctgaagtac
caagctcaggataatttcatgatgatggatgaggctgttctgtgtctggcagtaagtcac
gactctgacatgatcgcctctggagctcaggatggaaagatacaggtttggaggattctg
aacgggacgtgtctgaatagaatagaacgagcccacagcaaagcagtcacctgtgtctgc
ttcaacaaggacagcagtcaactattaagtgcctcttttgaccagatcatcaggcttcat
ggtttgaaatcaggaaagatgctgaaggagtttagaggccatacagctcatataaatgac
gtcatcttctcacacgatggccagcatgtcatcagcgcgtcagcagatggcacagtaaag
gtctggagcatgaagacaatggattgcacccacacaataaaaacccctgacattcctgag
ggtacagacatcactgtgaacaatgttgtgcttgtcccaaagactcccgagcactttgta
gtgtgcaataggaccaacacggttgttgttacaaacattcatggccaggtgatgaggagt
ttctgttcaggtgtaagagagggggcagactttgtttgctgcacgttgtccccacgtgga
gagtggatttattgtgtgggagaagactatgtgctgtactgcttcagcaccatcactggc
aagctagagagaaccctcacggtacatgaaaaagatgtgatcggcataactcaccacccc
catcagaatctcatcgccacttacagcgaggatggcctactcaaactctggaagccttga

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