Cyprinus carpio (common carp): 109097939
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Entry
109097939 CDS
T05134
Name
(RefSeq) GRB10-interacting GYF protein 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109097939
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109097939
Surveillance factors
Other surveillance factors
109097939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
CAF1A_acidic
TRI4_N
Motif
Other DBs
NCBI-GeneID:
109097939
NCBI-ProteinID:
XP_042588406
Ensembl:
ENSCCRG00000019477
UniProt:
A0A8C1US16
LinkDB
All DBs
Position
B10:10714681..10728936
Genome browser
AA seq
1001 aa
AA seq
DB search
MTAETLNFGPEWLRALSRGGSVTSPPPSPAMPKSKLADYRYGREEMLALYVKDNQIPEDM
QDKEFASILQEEPQQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGGGAVPAGVARGRGS
TRGGRGRGRGEGGFYQRSVDEEVGFGRGREMHRSQSWDDRGERRFEKPLRRDGGRGGFEE
GGAGGRKDYTRSDSENWRTLREEQEDEDGAEPGGSWRIAGGRREDGGPRSAGWRDNCSGD
GRRRKFDFDFRDGEGGRRRTGSEGGEEERDGLPEWCTDEEEGEMGTFDSSGAFMCIKKSS
RDAIPEDQELEFEALEEEEEGGQEKKDIPADKSDTCETIAVCDGERKSSSPHAVSAPAPV
HPVAEEKTPKPIVAPPLKPAPEPSEDAAPAGGTTMQMQSSSPPSTTGTELPTVGGDTEEE
DGMKHLQQEAEKMVASLQDTSLEEECFTQALQESHITAAHTHTHPNMHKHSHSTSHTLPR
SASALPLSHESAMKWFYKDPQGEVQGPFTTVEMCEWFQAGYFTMNLLVKRGCDEGFQPLG
EVIKMWGRVPFSPGPSPPPLLGNMDQEQLKKQLEQAATAALYQQLQMRFQQMNRCGETGM
MPAMNRSMSVPDTGPMWDMPTSVSQQSGGETSLWDLTMSNSTQGPTLEHLQKIQQERREA
ELRKREEEERKRREEKRRQQEEQKRREEEELYRRKQQCRQQQELIMKFLQQSQQQQSMPG
GTGWSGSQAGALSLGKATGKSMGLLDLDAERLHKQQQQRAQQQQRHGGLTMGQWSDGPSG
MWSGAGMEGKVGGGNPAMGMWDEAMKNQASHRNIGLKNSHSSPSLSDQYMLNRRKRTDDE
DRLLKLLQGMKPQDGFTTWCEQMLHVLNTSANNSSAVDVPTIVAYLKEVESPYEVHDFIR
IYLGDTIEAKEFAKQFLERRAKQKANHQRQQQQLSKEVSGLNMNFPLQSMFQAAHMSKGG
SVYDTQGGKTKKKPSMMLHSDPSILGYSFLGGGELEQVEDY
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggtccagaatggctccgtgcactatccagaggtggg
agtgtgacgtcccctcccccttcccctgcaatgccaaagtccaagttggccgactaccgc
tatggccgcgaggagatgttagcactttatgtcaaagataaccagatccctgaggacatg
caggataaggagttcgcttctatcctgcaggaagagcctcagcagccattggccttggtg
cccctgactgaggaggagcagagaaacttctccatgtctgtgaacagtgtggctgtacta
aggcttatgggtaaaggaggtggagctgtaccagcaggtgtagcaagagggcgtggaagc
actcgaggtggtcgagggagaggcagaggagagggtggattctaccaaagaagtgtggat
gaagaggtcggttttggccgaggacgagagatgcaccgcagtcaaagttgggatgacaga
ggtgagcggcgctttgaaaagcccttgaggcgtgatggtgggcgtggtggttttgaggag
ggaggagcagggggaaggaaggactacacgcgctcagacagcgaaaactggcgtacgctc
agagaggagcaggaggacgaagatggggcagaacctgggggaagctggaggattgctgga
ggccgtcgggaagatgggggtcctcgttcagcaggttggcgggataactgcagtggggat
ggccgtcgtaggaagtttgactttgacttccgagatggagaaggtggacgtagaaggact
ggaagtgagggaggagaggaagagcgagatggcctgcctgagtggtgcaccgatgaagaa
gaaggggagatgggaacctttgattcttctggagccttcatgtgcattaagaaaagctcc
agagatgcaatccctgaagaccaggaactggaatttgaagctctggaggaggaagaggag
ggtggtcaagagaagaaggacatccctgctgataaatcggacacatgtgaaacaatagct
gtgtgtgatggagaaagaaagtcatcatctcctcatgctgtgtctgctcctgcccctgtg
caccctgttgcagaggaaaagactcccaaacccatagttgctcctccattaaaacctgca
cccgaaccatctgaagatgcagctccagcaggtggcaccacaatgcagatgcagagctcc
tctcctccctcaaccactggtactgagcttccaacagtagggggagacaccgaggaggaa
gatggcatgaagcaccttcagcaggaggctgagaagatggtggcatccctgcaagacacg
tctcttgaagaggagtgtttcactcaagctcttcaggagagccacatcactgcggcacac
actcacacacacccgaatatgcacaaacactctcactccacctcacacactctcccgcgc
tccgccagtgctctgcccctgtcccatgaatctgcaatgaagtggttctacaaagaccct
caaggggaggttcaaggtccattcactacagtggagatgtgtgagtggtttcaggcgggt
tattttaccatgaacctgctggtcaaacgtggttgtgatgagggatttcagcccctgggt
gaagtcatcaagatgtgggggcgtgtgcctttctctcccggcccctcccctcctccactg
ctggggaacatggaccaggagcaactgaagaaacaattagagcaagctgccactgcagcc
ctgtaccaacaacttcagatgagatttcagcaaatgaacaggtgtggggagactgggatg
atgcctgcgatgaacaggtccatgtcagtgccagacaccgggcccatgtgggacatgcct
acctcagtctctcagcagtcaggcggtgagaccagtctgtgggacttaaccatgagtaac
tccactcagggtccaactcttgaacatttgcagaaaatccagcaggagaggcgtgaagct
gaactcaggaagcgtgaagaagaggagaggaaacggagggaggaaaagcgccggcagcaa
gaggaacagaagaggagagaggaggaggagctttatagacgaaaacagcagtgccgtcag
cagcaggaactgatcatgaagtttctgcagcagagccagcagcagcaaagcatgccaggg
ggcacagggtggagcggaagccaggcaggagctctgtctctgggcaaagctaccggaaag
agcatgggtctcctggacctggatgcagagagacttcacaaacagcagcagcagagagct
cagcagcagcaaaggcatgggggtttgacaatgggccagtggagtgatgggccatctggg
atgtggtcaggagctggcatggaagggaaggtcggaggtggcaaccctgctatgggcatg
tgggatgaggccatgaagaaccaggccagccatcgcaacattggcctgaagaacagccac
agcagtccctctctcagtgatcaatacatgctgaatcggcgtaaacgtactgacgatgag
gacaggcttctgaagcttcttcaggggatgaaacctcaggatggtttcaccacttggtgt
gaacagatgctccatgttctcaacacctctgcaaataactcctccgcagtggacgtgccc
accattgtggcatatctgaaggaggtggagtctccatatgaagttcatgactttatccgt
atttatctgggcgatacaattgaagccaaagagtttgccaagcagttcctggagcgccgt
gccaaacagaaagcgaaccaccagagacaacagcagcagctgtccaaggaagtctctgga
ttaaacatgaacttccccctgcagtcaatgttccaggcagctcacatgagtaagggcggc
agcgtatacgacactcagggaggaaaaacaaagaaaaagcctagcatgatgctccattct
gaccccagtatcctcggctactcattcctggggggaggtgagctggagcaggtggaggat
tactga
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