Cyprinus carpio (common carp): 109098054
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Entry
109098054 CDS
T05134
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109098054 (rrp12)
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
90S particles
Other 90S particles
109098054 (rrp12)
Pre-60S particles
Other pre-60S particles
109098054 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
V-ATPase_H_N
DUF6031
HEPN_Toprim_N
Motif
Other DBs
NCBI-GeneID:
109098054
NCBI-ProteinID:
XP_042593150
Ensembl:
ENSCCRG00000016531
UniProt:
A0A8C1IQ33
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All DBs
Position
B13:complement(20843674..20853201)
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AA seq
1284 aa
AA seq
DB search
MVKSGKLRSGTAQKIRRWKKGHSSDSNPETSRYRKAARSRYFSRPSEKSDLTVDALKLHN
ELQSGSLQRSSDAMEAGDAMEDQALTEKTSGTFLSGLSDCSNLTFRKVQRYWESNSAAHK
EICAVLAAVTEVIRSQGGKETETEYFAALMTTLEAVDSSESLAAVAYLLNLVMKRMPVAV
LKKKFSETAKALIDIMSNQANSDSLSSLRWIISCLATLLRKQDLSVWSYPSTLQMYHGLL
SFTVHCKPKVRKAAQQGICSVLHYSDFMFSDNAPVHHPAAAATAKFCCKELEQSGGSKED
TTTLHVLGLLKDLLSALPLSSVKSCCETLLRVMTLSHVLVTANAMQAFHKLFSNKPNPAS
MSAELNAQIITALYDYVPSENDLQPLLAWLAVMEKAHAHLSSLQSSLSIGHLPRLFTVTM
SCLLSPHTQVVSAATQTLKTLLNECVAPHMAEIGSVLPNTSVGNGACILKMFRIVEEGLS
YRFHASWPFVLQILGCFYRAAGKHAHPIMIKSLQSLSDLRATPQFPFSGELDLAVGSAVE
SMGPEVVLKAVPLLITGTDDDLEFPRSWLIPVIRDHVKNTQLAYFTSYFFPLANKLKQTA
DELEQSGQNLIAKVYQTLQMQIWTMLPGFCTKPTDLLASFKGIARSLGMALNDRPDLRLC
ICQALRTLINKSCETEEEKAELQRFSKNFLPILFNVYSQQPKPGETASARMAVLDTVRVY
LSITEQAMVCTFLQKASERLSGADNSEFTRLAVIDLIVAMAPFVDEASMTQTFSLIKPFV
ESKDSSIQKKAYRVLEEICGGESASCKAFVLQNLEKLKTMLMDSLTTAASSSKRPRLKCL
IHIVKQLNEEHRDFITALLPEVILCTKEMSIGARKNAYSLLVEIGNAFVRFCGNTKDAIN
EYLSHVFIGLTGSVTMITCTVLALTRLVFHYKDTIDVSSLELLLQNVCLLLSSRTRDVVK
ASLGFLKVLLFSMDVKVLASHIAVIMEGISNMNDMRRHFRVKLKNIYTKLIRKFGFELVK
SMLPADQHKILVNIRKTEARNKRRKLVNKTEEDGSDTEDEKPKVKAESIEDILAETDSDS
DDDEKPKKGQKKPMKKGQAWLKEGVSDEPLNFLDPKAAQRVLATNPNLKKACKTEHGFKM
TSDGRLIIKEEKDDDDCKTKDAEMDDVLEEAGVKTKKNPKRKMHEDLDDDDMDVNPAMKY
KAGGIGIHRPLDRRPEFGTEYKSKKGKGDVKKSGKCDPYAYVPLKKAQLNRRKKAKLQGQ
FKGMVRGAKKGARSGSKILKKRNA
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtccggaaaacttcgatccggaacagctcagaaaatcaggcgatggaagaaa
ggtcacagtagtgactccaatccggagacaagtcgctatcgaaaggccgcgagaagccga
tatttcagccgtccctctgaaaaaagtgatctgacagtagatgccttgaaactccacaat
gagcttcagtcaggatctctgcagagaagcagtgatgccatggaagcaggagatgccatg
gaggatcaagccctgacagagaaaacctctgggacttttcttagtggactgtcggactgc
tccaacctcactttcagaaaagtacagcgctactgggagtcaaactccgcagcacataaa
gagatctgtgctgtattggcggctgtaaccgaagtgattcggtctcagggaggaaaggag
acagagacagagtactttgcagccttgatgacaacactcgaagctgtagatagcagtgaa
tctctggcagctgttgcttacctcctaaacctggtcatgaaaaggatgcctgtggcagtg
cttaagaagaagttctcagaaacagccaaggctttgatagatatcatgtcaaaccaagcc
aattctgactctttgtcctctctgcgatggatcatatcctgtcttgcgactttgctgcgt
aaacaggatctgtcagtctggagttacccttcaactttacagatgtaccatgggcttttg
agcttcacagtgcactgtaaaccaaaggtgcgaaaagcagcgcagcagggtatttgctca
gtccttcattacagcgacttcatgttctctgataatgccccggtccatcacccagcagca
gccgccacagccaaattctgctgcaaagaattggagcagtcaggaggcagcaaagaagac
actaccactctgcacgtgcttggtcttctaaaagacctgctgtctgctcttcctctgagc
tctgtaaaatcttgctgtgagacccttctccgtgtgatgaccctgagccatgtgctggta
acagcaaatgcaatgcaggctttccacaagctcttcagcaacaagcctaatcctgccagc
atgtctgcagaactgaatgcacagatcatcacagctctatatgactatgttccaagtgag
aatgatctgcagcctttactagcatggcttgctgtaatggaaaaagcccatgctcatctt
tccagtttacagagctctctgagcatcggtcatcttcctcgcctcttcactgtcaccatg
tcgtgtcttctgtctccacacacacaagtagtctctgctgcgactcagactctgaagact
ctgttaaatgagtgtgtggctccgcatatggctgagatcggatccgttttaccaaacaca
tcagttggaaatggggcttgcatcctaaagatgtttcgtatcgtggaggaaggattgtcc
tatcgttttcacgcctcttggccatttgtgctgcagatcttgggctgtttctaccgagct
gcaggaaaacatgctcatcctattatgataaagagtctgcagtctctcagtgacctgcgc
gccacccctcagttccccttctctggagagctggatctggctgtgggcagtgcggtggag
agcatgggcccagaggtggtcctgaaagctgtgcccctcctcatcactggaacagatgat
gacctggagttcccgcgtagctggctgatcccagtcataagagatcatgtgaaaaacact
cagttggcttacttcacctcatactttttccctctggcaaacaaacttaaacagacagct
gatgaactggagcagtcaggacagaacttgattgctaaagtgtatcagactctacagatg
cagatttggaccatgttacctgggttctgcactaaacccaccgatctgttggcatcattt
aagggcattgctcggtctctgggtatggccctgaatgatcgtcctgacctccgtctgtgc
atctgccaggccttgcggactcttatcaacaagagctgtgaaacagaggaggaaaaggca
gaattgcaacgattttccaagaacttccttcccatcctttttaatgtctacagtcagcag
ccgaaacctggagagacggcgtctgctagaatggctgtcctggacacagtcagagtctac
ctaagcattacagaacaggcgatggtgtgcacatttctgcagaaagcatcagagagactc
agcggtgcagacaactctgaattcacacggcttgcagttatcgacttgattgtggcaatg
gctccgtttgtagatgaagcatccatgacccagacattcagtttgattaaaccttttgtg
gagagcaaggattctagcatccagaagaaagcctaccgtgtgctggaggaaatttgtgga
ggagagagtgcgtcttgtaaggcttttgttctgcagaatcttgagaagctgaaaacaatg
ctgatggatagcctgacgacagcggcctcatcttccaaacggcctagactcaagtgtctg
attcacatagtaaagcagctgaatgaagaacaccgtgattttattacagctctgcttcct
gaggtgattctttgcactaaggaaatgtcaattggtgcccgcaaaaatgcctactctctt
ctagttgagatcggaaatgcatttgtaaggttttgtgggaacacaaaagatgccataaat
gagtatttaagccatgtctttattggactaactggctctgtaacgatgatcacctgtaca
gttctggctttaacaagactagtgttccattacaaagataccattgacgtgtcctcactg
gagctgctgctgcaaaatgtgtgtctgctgctttcgagcaggacacgagacgtcgtcaaa
gcctctctgggtttcctaaaagtcttgctcttttctatggatgtcaaggttttagccagc
catattgctgttattatggaaggcatcagcaatatgaatgatatgcggagacattttagg
gtgaaacttaagaacatttacaccaagttgattaggaaatttggatttgagctggtcaaa
agcatgttgccggctgatcaacacaagattctagtgaacatccgtaaaacggaggccagg
aataagagacgcaaactcgtgaacaagacggaagaggatggatcagacactgaggatgag
aagcctaaagtgaaagcagagagtattgaggacattctggccgagacagactctgactca
gatgacgatgagaagcctaaaaagggtcagaagaagccaatgaaaaagggccaggcctgg
ttaaaggaaggtgtatctgacgaaccactcaacttccttgatccaaaagcagcgcagaga
gttttggccaccaaccctaatcttaaaaaggcctgcaaaacagagcatggattcaagatg
acatccgatggaaggctgatcatcaaagaggagaaagatgacgatgattgtaaaacaaaa
gatgctgaaatggatgatgtacttgaagaggctggagtcaaaactaagaagaatccaaag
aggaaaatgcatgaagatctagatgatgatgatatggatgtcaaccctgcaatgaaatac
aaagctggtggcattggaatccacaggcctctggatagaagaccagagtttgggacggag
tataaatctaagaagggaaaaggtgatgttaagaagtctggcaagtgtgacccatatgcg
tatgtaccattgaagaaagcccagctcaaccgcaggaaaaaggccaaactccaaggccag
ttcaaaggcatggtcagaggggccaaaaaaggagcacgctctggatcgaaaatactgaag
aagaggaatgcctga
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