KEGG   Cyprinus carpio (common carp): 109098133
Entry
109098133         CDS       T05134                                 
Symbol
cul4a
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03420  Nucleotide excision repair
ccar04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109098133 (cul4a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    109098133 (cul4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccar04121]
    109098133 (cul4a)
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109098133 (cul4a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccar04147]
    109098133 (cul4a)
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     109098133 (cul4a)
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109098133 (cul4a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109098133 (cul4a)
Exosome [BR:ccar04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109098133 (cul4a)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 109098133
NCBI-ProteinID: XP_018967287
Ensembl: ENSCCRG00000017525
UniProt: A0A9Q9VEL8
LinkDB
Position
A1:complement(16584067..16838759)
AA seq 745 aa
MMAEDIQHNQKANFNGLTKSAKSGASKKLTIKNFKDRPELTDSYTEDTWIKLRDAVSAIQ
NSTSIKYNLEELYQAVENLCSYKVSPVLYKQLRQVCEDHIQAQIHQFREESLDSLSFLKR
MNRCWQDHCSQTIMIRSIFLFLDRTYILQNSLLPSIWDTGLELFRTHIVSDGAVQSRTVE
GILEQIERERNGETVDRSLLRSLLGMLSDLQVYKDSFEQRFLTETNRLYAAEGQRLMQER
DVPEYLHHVSRRLEEENDRVISYLDQSTQKPLIATVEKQLLGEHMNAILQKGLWMLLDEN
RVCELTLLYELLSKVKGGLMTLLQAWRDYIKSFGGEIVSSPEKDKELVQELLDFKDKMDH
VTQRCFQRNDNFINAMKEAFENFINKRPNKPAELIAKYVDSKLRAGNKEATEEELERILD
KIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGM
FKDMELSKDIMIQFKQYMQNQGDPSNIELTVNILTMGYWPSYTPMDVHLPAEMVKLQEVF
KIFYLGKHSGRKLQWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLMFNECDEYSVEEIR
TATGIEDGELKRTLQSLACGKARVLNKMPRGKDVEDADRFHFNSDFTHKLFRIKINQIQM
KETVEEQVSTTERVFQDRQYQIDAALVRIMKMRKTLSHNLLVSELYNQLKFPVKPADLKK
RIESLIDRDYMERDKENPNQYHYVA
NT seq 2238 nt   +upstreamnt  +downstreamnt
atgatggcggaagacattcagcacaatcagaaagcaaactttaatggactcaccaaatca
gccaaatcaggagcgtctaagaaactcaccataaagaactttaaagacagaccggaacta
acagactcctacactgaagacacatggataaagctcagagatgctgttagtgccattcag
aacagcacctcaatcaaatataacctggaggagctttaccaggccgtggagaatctgtgt
tcgtataaagtatcacctgtgttatacaagcagctgcgtcaagtgtgtgaagatcacatt
caagctcagatccatcagttcagggaagagtcactggacagcctgtcattcctgaagagg
atgaaccgctgctggcaggaccactgcagtcaaacgatcatgatccgcagtattttcctc
ttcctggaccgaacatacatcctccagaactcactgctgccatccatctgggacacgggg
ctggagttgttccggacgcacattgtgagtgatggtgccgttcaaagccggacagtggag
ggaatcctggagcagattgagcgtgagcgtaatggagagacggtggaccgcagtctgctg
aggagcttactgggcatgctatctgacctgcaggtgtataaagactcattcgagcagagg
tttttaacagagacgaaccgactgtacgcagctgagggtcagaggctcatgcaggagaga
gatgttcctgagtaccttcatcatgtgtcgcggcgtctagaggaagagaatgaccgtgtc
atcagttatttagatcagagcacacagaagccactcattgccacagtggagaagcagctg
ctgggcgaacacatgaatgccattctacagaaaggtctgtggatgctactggatgagaac
cgtgtttgtgagctgacgctgctctatgagctcttaagtaaagtcaaaggagggctgatg
acgctgctgcaggcttggagagactacattaagagttttggtggagagatcgtgagttct
ccagagaaggataaagagttggttcaggagctgctggacttcaaggacaagatggaccac
gtgacccagcgctgcttccagaggaacgacaatttcatcaatgccatgaaggaagccttc
gagaacttcatcaacaagagacccaacaaacctgccgagctcattgctaagtatgtggat
tctaaactgcgcgctggaaataaggaggccacagaggaggagctggagaggattctggac
aagatcatgatcatcttccggttcatccatggaaaggatgtttttgaggctttctataag
aaggatctggccaagcgtctgctggtgggcaagagtgcctcggtggatgctgagaaatcc
atgctgtccaaactcaaacatgagtgtggagcagcattcaccagtaaactagaggggatg
ttcaaagacatggagctctccaaagacatcatgatccagttcaaacagtacatgcagaac
cagggtgatcccagcaacatcgagctgaccgtcaacatcctgacaatgggctactggccc
tcatacacaccgatggatgtccatctgcctgcagagatggtgaagcttcaggaagtgttt
aagatattctatctggggaagcacagcgggcgtaaactacagtggcagcccacactgggt
catgcagtgctgaagactgagtttaaagagggtaagaaggagctgcaggtgtctttgttt
cagactcttgtcctgctaatgtttaatgagtgtgacgagtattcagtggaggagatccgc
acggccacaggcatcgaggatggtgagctcaagcgcacgcttcagtctctggcctgtggg
aaagcgcgagtgctcaataaaatgccacgcgggaaagacgtggaggatgcagaccgcttc
cacttcaacagcgacttcacacacaaactcttccgcatcaaaatcaaccagatccagatg
aaggagacggtggaggagcaggtgagcacaaccgagcgcgtgtttcaggatcgtcagtat
cagatcgatgcggcgttggtgaggatcatgaagatgaggaagactctgagccacaacctg
ctggtgtctgaactctacaaccagctcaagttccccgtcaagccggctgatctgaagaag
cgcatcgagtcactgatcgaccgtgattatatggagcgcgacaaagaaaacccaaaccag
taccactatgtggcgtaa

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