Cyprinus carpio (common carp): 109098304
Help
Entry
109098304 CDS
T05134
Name
(RefSeq) host cell factor 1-like
KO
K14966
host cell factor 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03083
Polycomb repressive complex
ccar04980
Cobalamin transport and metabolism
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109098304
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
109098304
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109098304
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccar01009
]
109098304
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109098304
03029 Mitochondrial biogenesis [BR:
ccar03029
]
109098304
Protein phosphatases and associated proteins [BR:
ccar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109098304
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
109098304
HMT complexes
COMPASS/SET1 complex
109098304
MLL-HCF complex
109098304
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
109098304
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
109098304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
109098304
NCBI-ProteinID:
XP_042622342
UniProt:
A0A9R0B4U0
LinkDB
All DBs
Position
A11:complement(14443604..14463368)
Genome browser
AA seq
1850 aa
AA seq
DB search
MTSPGSTVPGPTGAPLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLAFGGMVEYGKYSNDLYELQASRWE
WKKLKPKAPKNGAPPCPRLGLGFCLLCVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLE
LRPGSNIVGWDIPVTYGVLPPPRESHTAVVYTEKTTKKSRLVIYGGMSGCRLGDLWTLDI
DTLTWNKPAISGVAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLA
CLNLDTLSWETVLMDTLEDNIPRARAGHCAVAINNRLYVWSGRDGYRKAWNNQVCCKDLW
YLETERPNPPSRVQLVRANTNSLEVSWGAVSTADMYLLQLQKYDIPSATAATSPTLNAVP
SLPGNSPKSPAPAAAAPSAQSLPQSGFTLVPQAASHTASVLPSTPASPVAASTARGPGSN
FLTVEFIMFFFVFKLFTGTSFVTVRQASQAGKSPVTMTSLPAGVRMVVPAQTTQGTPMGS
SPQMSGMAALAAAAAATQKIPPSPGTTVLNMPAGATIVKTVAVTPGSTTLPNTVKVGSPV
MVSNPATRMLKTAAAQVSTPTVSSPTTAARPIITVHKSGTVTVAQQAQVVTTMVGGVTKT
ITLVKSPLSMGGNLISNLGKVMSVVQTKPVQTSAVTGQASSNPVTQIIQTKGPLPPGTIL
KLVTSADGKPTTIITTSQAGGTGNKPTILGISGMSPSTTKPGTTTIFKTIPMSALQQGAA
GLTSSTGVKSPITIITSKVMTSGTGTPGKIITAVPKIGTAAGQQGLTQVVLKGAPGQPGT
ILRTLPMGGVRLVSPVSGVKPTVTTLVVKGTTGVTTLGTVTGTVSSSLAGGSLASANATL
ATPITTLGTIATLSNQVINATAAQSNLNTVTSTVQPTQVTLITTPSGVEAQPVQDLPVSI
LASPTSEQPTSTESGAGDASGNVTLVCSNPPCETHETGTTNTATTATSNMGTGPAGTVQR
VCSNPPCETHETGTTNTATTASANMGAVQRVCSNPPCETHETGTTNTATTASSNMGTTPA
GTVQKVCSNPPCETHETGTTNTATTASSNMGGNQTGAVQRVCSNPPCETHETGTTNTATT
ASSNMGGNQTGAVQRVCSNPPCETHETGTTNTATTASSNMGGNQTGTVQKVCSNPPCETH
ETGTTNTATTASSNMGENQTGAVQRVCSNPPCETHETGTTNTATTATCSMETDEGTAQQS
DEVSESTTSTEGLPSTSAPQSRAITMVTQATPLPGPAVPSISSITESSSEAGAEPVVMES
SEAESLQTEGQAEAEAVAMQAEFQTEVGEVAMPSDFQADAAALPSDFQGEAIAVAMQAES
QAEEGAVPMEHDASSMAEGGTAQEQLPTAEMEGVEAASASQAEALALPPELMSDGQPTTL
MVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMSSGDAGGDDQQTHTI
PIVLTQQELAALVQQQQQLQAAQQQAAAQAALPTEGLAPADSLNDPSSESNGHNEIAAAA
TSTVVRLLPSTSAETLAPSSTLAPAVVASPAKMQAAAALTEVANGIVAVKQNPPTVTVKP
QVKKENQWFDVGIVKVTNMVVTHFYMPADDSAYVEDDSGTIPDYSQMKRVDLQPGTAYKF
RVAGINTCGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKITEYS
VYLAIQSSQATEAKPSAPAQLAFMRVYCGPNPSCLVQSSILSNAHIDYTTKPAIIFRIAA
RNEKGYGPATQVRWLQESNKDGLSAKPAPKRAVSSPDTKGIGQKKARMDQ
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccccggctccactgtgccgggccccaccggagctccgctgcagccgcgatgg
aagcgggtcctgggatggtccgggccggttccccgaccgagacacgggcacagagccgta
gccatcaaggagctgatggtcgttttcggcggaggaaacgaaggaatcgttgacgagttg
cacgtttataatacagcaacaaaccagtggttcataccagctgtgcgtggagacattcct
cccggctgtgcagcttatggttttgtatgtgatggcacacgtctattagcttttggtgga
atggtggaatatggaaagtacagcaatgacctttatgagttacaggcaagcagatgggaa
tggaaaaaattgaaaccaaaagcccctaaaaatggagcaccaccatgccctcgccttggc
cttggtttttgtcttttgtgtgtgggcaacaagtgctatctttttggtgggcttgccaat
gacagtgaagaccccaagaacaacattcccagatatttgaatgacctttatacccttgag
ctgcgtccgggctccaacattgtgggctgggatataccggtcacatatggtgtactgcct
cctccaagagagagccacactgctgtagtttatactgaaaaaactactaagaagtcccgt
cttgttatatacggaggaatgagtggttgccgtttgggagatctttggacgttagatatt
gatacactgacctggaacaagcctgcaataagcggcgtagctcccctcccccgtagcctc
cactcagccaccactattacaaacaagatgtatgtttttggtggctgggttcctttggtg
atggatgatgtgaaggtggccacacatgagaaggagtggaagtgtacaaacacactcgcc
tgcctaaacttggacaccttgtcatgggagactgttttgatggacactttggaggacaac
ataccacgtgcacgagcaggacattgcgctgttgctattaacaacagactttatgtttgg
agtggacgtgatgggtaccgcaaagcttggaacaatcaggtgtgctgcaaagatctctgg
tacctggagacagagcgacctaatcctccttcacgggtacagcttgtccgggccaacaca
aattctttagaggttagctggggagcggtgtctacagcagacatgtacctgcttcagctt
cagaaatatgatatcccatcagccactgctgccacatcaccaaccctcaacgcagttccc
tccctccctggaaactcgcctaagagtccagcgcctgccgcagctgcaccgtctgctcag
agtctgccgcaaagtggcttcaccctcgtgccccaggctgcttctcacacagcctcagtc
ctgcccagcacacctgcaagtcctgtggcagcctcaacagcacgtggcccaggttccaat
tttttaacggttgagtttattatgtttttttttgtatttaagttattcaccgggacgtcg
tttgtcactgtgcggcaggccagccaggctggaaaatccccagtgactatgacatcactt
cctgcaggtgttcgcatggtagtgccagcacagaccactcaaggaacgcccatgggcagc
agccctcagatgagtggaatggcagctttggccgcagctgctgcagccacacagaaaatc
cctccttcccctggaactactgttctcaatatgccggctggggccacaattgttaaaacg
gtggctgtgacacctgggtccaccactctccccaacacagttaaagtgggatcacctgtc
atggtaagcaaccctgccactcgcatgctgaagactgcggctgcacaggtgtccactccg
acagtgtccagtcccaccacagctgctcggcccatcatcactgtgcacaagtctggcaca
gttaccgtagcccagcaggctcaggttgtgaccacgatggtgggcggagtcaccaagacc
atcactcttgttaagagcccactttccatgggaggaaacctgatttccaacttgggcaag
gtgatgtcagtggttcagaccaaaccagtgcagacatctgctgtgactggacaggcctcc
tccaacccagtgactcaaattatacagacaaagggtcccctcccacccggcaccattctg
aaactggtaacgtctgcggatggaaagcctaccaccataattaccaccagtcaagcaggt
ggcaccggaaacaaacccactatcttgggtatcagtggcatgtcccctagcaccaccaaa
ccaggcaccaccactattttcaaaacaatccccatgtctgctctacagcagggagctgca
ggcctgactagtagtacaggggtgaagagcccaattaccatcatcacctcaaaggtgatg
acatctggaacaggaactcctggcaaaatcattacagcagtgcctaagattggtacagca
gctggccagcaaggcctaacacaggtcgttctgaagggagctcctggtcagcctggaacc
atccttcgcactttgccgatgggaggagtgcgtcttgtgtctccagtatctggggtcaag
ccaactgtaaccacactggttgtcaagggaacaactggtgtaacaacacttggcacagtc
acaggaactgtttcttccagcttagctggaggaagtttagccagtgccaatgccaccctg
gcaactcccatcacaactctgggcacgattgccaccctctccaaccaggtcattaatgct
acagctgcccaaagcaacctgaacactgtcacctccactgtgcagcccacccaggtgaca
ctcataactacacccagtggtgtggaggctcagcctgtccaagatctgcctgtttccatt
ctggcctctcccacctctgagcagcccacctctactgagtctggtgcaggcgatgcttct
ggcaatgttactttagtgtgctccaacccaccctgtgagactcatgagacgggcaccacc
aacacggccaccacagcaacatcaaatatgggcactggaccagctggcacagtacagaga
gtgtgctccaacccgccctgcgaaacgcatgaaacgggtacaacaaacaccgccaccaca
gcatctgccaacatgggcgctgtacagagggtctgctcaaacccaccatgtgagacccat
gaaacgggcaccaccaacaccgcaaccacagcatcctcaaatatgggcactacccctgct
ggcactgtccagaaggtctgctccaacccaccctgtgagacccacgagacaggcaccacc
aacacagctaccacagcgtcatctaacatgggcggaaatcaaacaggagccgtgcagagg
gtctgctcgaacccaccttgtgagacccatgagacgggcaccaccaacacagctaccaca
gcgtcatctaacatgggcggaaatcaaacaggagccgtgcagagggtctgctcgaaccca
ccttgtgagacccacgagacaggcaccaccaacacagctaccacagcgtcatctaacatg
ggcggaaatcaaacaggaacggtgcagaaggtctgctccaacccaccctgtgagacccac
gagacgggcaccaccaacacagctaccacagcgtcatctaacatgggggaaaatcaaacg
ggagcagtgcagagggtctgctcgaacccaccttgtgaaacccacgagaccggcaccacc
aacacggcaaccactgcaacctgcagtatggaaacagatgagggaacagcccaacagagt
gatgaagtttcagaatctaccactagtacagaaggcctgccatccacttcagctccccag
agcagagccattaccatggtcacacaggccacacctctaccaggaccagctgttccgtct
atctcttcaatcacggagtcatcctcagaggctggagctgagccggttgttatggagagt
tcggaagcagagtctttgcagacagaaggccaggctgaagcggaggcagtcgccatgcag
gcagagttccagacagaggtgggggaagtggctatgcccagtgacttccaggcagatgca
gcggccttgccgagtgacttccagggagaagccatagctgtagccatgcaggcagagagc
caggcagaggaaggggcggtgcctatggagcatgacgcttctagcatggcagagggagga
acagctcaggagcagctacctacagcagagatggagggtgtagaagcggcatcagcatca
caggccgaggcactggccttgccaccagagctgatgtcagatgggcaacccacaacgctg
atggtgacgggtctgaccccagaggagctggccgtaacggcagccgcagaggcggcagcc
caggctgcagcgacagaggaggcccaggccctcgccattcaggctgtactgcaagcagca
caacaggctgttatgagctcaggtgatgctggaggagacgaccagcagacccacaccata
cccatcgttctgacccagcaggaactagcggctttggttcagcagcaacagcagctccag
gcagcccagcagcaagctgctgctcaggccgcactgcccacagagggcttggctccggct
gacagcctaaatgatccctcctcagaaagcaatggacacaacgagatcgccgccgctgcc
acaagtacagtagtcagactgctgcctagcacctcagcagagaccttggctccatccagc
acattagcacctgcagtagttgccagtccagctaaaatgcaggcagctgcagctctgact
gaagtggccaatggtattgtggctgtgaaacaaaaccctcccactgttacggtcaaacct
caagtgaagaaagaaaaccagtggtttgatgttggcattgtcaaagtgaccaatatggtt
gtaacacatttctacatgcctgcggatgactctgcttatgttgaggatgattctggcaca
atccctgactacagccagatgaagagggtggaccttcagcccgggacggcctacaaattc
cgtgtggcgggtataaacacgtgtggccgcggagccttttctgaaatatctgctttcaag
acttgtttgccaggcttcccaggggcaccgtgtgccataaagatcagcaagagtccagac
ggcgcccatcttacatgggagcctccatccgtgacatcaggaaagatcacagagtattct
gtgtatttggccatccagagcagccaggccaccgaggcaaaaccctcggccccggcccag
cttgccttcatgcgtgtttactgtgggccaaatccctcatgcctggtccagtcctccatc
ttgtccaacgcccatatagactataccaccaaacccgccatcattttccgcatcgcggca
cgcaacgagaaaggttacggcccggctacacaagtgcgatggctgcaagagtctaacaaa
gatggcctttctgcaaagcctgccccaaaaagagcagtttcttcaccagatacgaaaggg
attggtcagaagaaagcaagaatggaccagtga
DBGET
integrated database retrieval system