KEGG   Cyprinus carpio (common carp): 109098304
Entry
109098304         CDS       T05134                                 
Name
(RefSeq) host cell factor 1-like
  KO
K14966  host cell factor 1
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03083  Polycomb repressive complex
ccar04980  Cobalamin transport and metabolism
ccar05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    109098304
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    109098304
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109098304
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccar01009]
    109098304
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccar03036]
    109098304
   03029 Mitochondrial biogenesis [BR:ccar03029]
    109098304
Protein phosphatases and associated proteins [BR:ccar01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109098304
Chromosome and associated proteins [BR:ccar03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     109098304
   HMT complexes
    COMPASS/SET1 complex
     109098304
    MLL-HCF complex
     109098304
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     109098304
Mitochondrial biogenesis [BR:ccar03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    109098304
SSDB
Motif
Pfam: Kelch_HCF Kelch_KLHDC2_KLHL20_DRC7 Beta-prop_FBX42 Beta-prop_ATRN-LZTR1 Kelch_1 fn3 Kelch_FKB95
Other DBs
NCBI-GeneID: 109098304
NCBI-ProteinID: XP_042622342
UniProt: A0A9R0B4U0
LinkDB
Position
A11:complement(14443604..14463368)
AA seq 1850 aa
MTSPGSTVPGPTGAPLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLAFGGMVEYGKYSNDLYELQASRWE
WKKLKPKAPKNGAPPCPRLGLGFCLLCVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLE
LRPGSNIVGWDIPVTYGVLPPPRESHTAVVYTEKTTKKSRLVIYGGMSGCRLGDLWTLDI
DTLTWNKPAISGVAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLA
CLNLDTLSWETVLMDTLEDNIPRARAGHCAVAINNRLYVWSGRDGYRKAWNNQVCCKDLW
YLETERPNPPSRVQLVRANTNSLEVSWGAVSTADMYLLQLQKYDIPSATAATSPTLNAVP
SLPGNSPKSPAPAAAAPSAQSLPQSGFTLVPQAASHTASVLPSTPASPVAASTARGPGSN
FLTVEFIMFFFVFKLFTGTSFVTVRQASQAGKSPVTMTSLPAGVRMVVPAQTTQGTPMGS
SPQMSGMAALAAAAAATQKIPPSPGTTVLNMPAGATIVKTVAVTPGSTTLPNTVKVGSPV
MVSNPATRMLKTAAAQVSTPTVSSPTTAARPIITVHKSGTVTVAQQAQVVTTMVGGVTKT
ITLVKSPLSMGGNLISNLGKVMSVVQTKPVQTSAVTGQASSNPVTQIIQTKGPLPPGTIL
KLVTSADGKPTTIITTSQAGGTGNKPTILGISGMSPSTTKPGTTTIFKTIPMSALQQGAA
GLTSSTGVKSPITIITSKVMTSGTGTPGKIITAVPKIGTAAGQQGLTQVVLKGAPGQPGT
ILRTLPMGGVRLVSPVSGVKPTVTTLVVKGTTGVTTLGTVTGTVSSSLAGGSLASANATL
ATPITTLGTIATLSNQVINATAAQSNLNTVTSTVQPTQVTLITTPSGVEAQPVQDLPVSI
LASPTSEQPTSTESGAGDASGNVTLVCSNPPCETHETGTTNTATTATSNMGTGPAGTVQR
VCSNPPCETHETGTTNTATTASANMGAVQRVCSNPPCETHETGTTNTATTASSNMGTTPA
GTVQKVCSNPPCETHETGTTNTATTASSNMGGNQTGAVQRVCSNPPCETHETGTTNTATT
ASSNMGGNQTGAVQRVCSNPPCETHETGTTNTATTASSNMGGNQTGTVQKVCSNPPCETH
ETGTTNTATTASSNMGENQTGAVQRVCSNPPCETHETGTTNTATTATCSMETDEGTAQQS
DEVSESTTSTEGLPSTSAPQSRAITMVTQATPLPGPAVPSISSITESSSEAGAEPVVMES
SEAESLQTEGQAEAEAVAMQAEFQTEVGEVAMPSDFQADAAALPSDFQGEAIAVAMQAES
QAEEGAVPMEHDASSMAEGGTAQEQLPTAEMEGVEAASASQAEALALPPELMSDGQPTTL
MVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMSSGDAGGDDQQTHTI
PIVLTQQELAALVQQQQQLQAAQQQAAAQAALPTEGLAPADSLNDPSSESNGHNEIAAAA
TSTVVRLLPSTSAETLAPSSTLAPAVVASPAKMQAAAALTEVANGIVAVKQNPPTVTVKP
QVKKENQWFDVGIVKVTNMVVTHFYMPADDSAYVEDDSGTIPDYSQMKRVDLQPGTAYKF
RVAGINTCGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKITEYS
VYLAIQSSQATEAKPSAPAQLAFMRVYCGPNPSCLVQSSILSNAHIDYTTKPAIIFRIAA
RNEKGYGPATQVRWLQESNKDGLSAKPAPKRAVSSPDTKGIGQKKARMDQ
NT seq 5553 nt   +upstreamnt  +downstreamnt
atgacgtcccccggctccactgtgccgggccccaccggagctccgctgcagccgcgatgg
aagcgggtcctgggatggtccgggccggttccccgaccgagacacgggcacagagccgta
gccatcaaggagctgatggtcgttttcggcggaggaaacgaaggaatcgttgacgagttg
cacgtttataatacagcaacaaaccagtggttcataccagctgtgcgtggagacattcct
cccggctgtgcagcttatggttttgtatgtgatggcacacgtctattagcttttggtgga
atggtggaatatggaaagtacagcaatgacctttatgagttacaggcaagcagatgggaa
tggaaaaaattgaaaccaaaagcccctaaaaatggagcaccaccatgccctcgccttggc
cttggtttttgtcttttgtgtgtgggcaacaagtgctatctttttggtgggcttgccaat
gacagtgaagaccccaagaacaacattcccagatatttgaatgacctttatacccttgag
ctgcgtccgggctccaacattgtgggctgggatataccggtcacatatggtgtactgcct
cctccaagagagagccacactgctgtagtttatactgaaaaaactactaagaagtcccgt
cttgttatatacggaggaatgagtggttgccgtttgggagatctttggacgttagatatt
gatacactgacctggaacaagcctgcaataagcggcgtagctcccctcccccgtagcctc
cactcagccaccactattacaaacaagatgtatgtttttggtggctgggttcctttggtg
atggatgatgtgaaggtggccacacatgagaaggagtggaagtgtacaaacacactcgcc
tgcctaaacttggacaccttgtcatgggagactgttttgatggacactttggaggacaac
ataccacgtgcacgagcaggacattgcgctgttgctattaacaacagactttatgtttgg
agtggacgtgatgggtaccgcaaagcttggaacaatcaggtgtgctgcaaagatctctgg
tacctggagacagagcgacctaatcctccttcacgggtacagcttgtccgggccaacaca
aattctttagaggttagctggggagcggtgtctacagcagacatgtacctgcttcagctt
cagaaatatgatatcccatcagccactgctgccacatcaccaaccctcaacgcagttccc
tccctccctggaaactcgcctaagagtccagcgcctgccgcagctgcaccgtctgctcag
agtctgccgcaaagtggcttcaccctcgtgccccaggctgcttctcacacagcctcagtc
ctgcccagcacacctgcaagtcctgtggcagcctcaacagcacgtggcccaggttccaat
tttttaacggttgagtttattatgtttttttttgtatttaagttattcaccgggacgtcg
tttgtcactgtgcggcaggccagccaggctggaaaatccccagtgactatgacatcactt
cctgcaggtgttcgcatggtagtgccagcacagaccactcaaggaacgcccatgggcagc
agccctcagatgagtggaatggcagctttggccgcagctgctgcagccacacagaaaatc
cctccttcccctggaactactgttctcaatatgccggctggggccacaattgttaaaacg
gtggctgtgacacctgggtccaccactctccccaacacagttaaagtgggatcacctgtc
atggtaagcaaccctgccactcgcatgctgaagactgcggctgcacaggtgtccactccg
acagtgtccagtcccaccacagctgctcggcccatcatcactgtgcacaagtctggcaca
gttaccgtagcccagcaggctcaggttgtgaccacgatggtgggcggagtcaccaagacc
atcactcttgttaagagcccactttccatgggaggaaacctgatttccaacttgggcaag
gtgatgtcagtggttcagaccaaaccagtgcagacatctgctgtgactggacaggcctcc
tccaacccagtgactcaaattatacagacaaagggtcccctcccacccggcaccattctg
aaactggtaacgtctgcggatggaaagcctaccaccataattaccaccagtcaagcaggt
ggcaccggaaacaaacccactatcttgggtatcagtggcatgtcccctagcaccaccaaa
ccaggcaccaccactattttcaaaacaatccccatgtctgctctacagcagggagctgca
ggcctgactagtagtacaggggtgaagagcccaattaccatcatcacctcaaaggtgatg
acatctggaacaggaactcctggcaaaatcattacagcagtgcctaagattggtacagca
gctggccagcaaggcctaacacaggtcgttctgaagggagctcctggtcagcctggaacc
atccttcgcactttgccgatgggaggagtgcgtcttgtgtctccagtatctggggtcaag
ccaactgtaaccacactggttgtcaagggaacaactggtgtaacaacacttggcacagtc
acaggaactgtttcttccagcttagctggaggaagtttagccagtgccaatgccaccctg
gcaactcccatcacaactctgggcacgattgccaccctctccaaccaggtcattaatgct
acagctgcccaaagcaacctgaacactgtcacctccactgtgcagcccacccaggtgaca
ctcataactacacccagtggtgtggaggctcagcctgtccaagatctgcctgtttccatt
ctggcctctcccacctctgagcagcccacctctactgagtctggtgcaggcgatgcttct
ggcaatgttactttagtgtgctccaacccaccctgtgagactcatgagacgggcaccacc
aacacggccaccacagcaacatcaaatatgggcactggaccagctggcacagtacagaga
gtgtgctccaacccgccctgcgaaacgcatgaaacgggtacaacaaacaccgccaccaca
gcatctgccaacatgggcgctgtacagagggtctgctcaaacccaccatgtgagacccat
gaaacgggcaccaccaacaccgcaaccacagcatcctcaaatatgggcactacccctgct
ggcactgtccagaaggtctgctccaacccaccctgtgagacccacgagacaggcaccacc
aacacagctaccacagcgtcatctaacatgggcggaaatcaaacaggagccgtgcagagg
gtctgctcgaacccaccttgtgagacccatgagacgggcaccaccaacacagctaccaca
gcgtcatctaacatgggcggaaatcaaacaggagccgtgcagagggtctgctcgaaccca
ccttgtgagacccacgagacaggcaccaccaacacagctaccacagcgtcatctaacatg
ggcggaaatcaaacaggaacggtgcagaaggtctgctccaacccaccctgtgagacccac
gagacgggcaccaccaacacagctaccacagcgtcatctaacatgggggaaaatcaaacg
ggagcagtgcagagggtctgctcgaacccaccttgtgaaacccacgagaccggcaccacc
aacacggcaaccactgcaacctgcagtatggaaacagatgagggaacagcccaacagagt
gatgaagtttcagaatctaccactagtacagaaggcctgccatccacttcagctccccag
agcagagccattaccatggtcacacaggccacacctctaccaggaccagctgttccgtct
atctcttcaatcacggagtcatcctcagaggctggagctgagccggttgttatggagagt
tcggaagcagagtctttgcagacagaaggccaggctgaagcggaggcagtcgccatgcag
gcagagttccagacagaggtgggggaagtggctatgcccagtgacttccaggcagatgca
gcggccttgccgagtgacttccagggagaagccatagctgtagccatgcaggcagagagc
caggcagaggaaggggcggtgcctatggagcatgacgcttctagcatggcagagggagga
acagctcaggagcagctacctacagcagagatggagggtgtagaagcggcatcagcatca
caggccgaggcactggccttgccaccagagctgatgtcagatgggcaacccacaacgctg
atggtgacgggtctgaccccagaggagctggccgtaacggcagccgcagaggcggcagcc
caggctgcagcgacagaggaggcccaggccctcgccattcaggctgtactgcaagcagca
caacaggctgttatgagctcaggtgatgctggaggagacgaccagcagacccacaccata
cccatcgttctgacccagcaggaactagcggctttggttcagcagcaacagcagctccag
gcagcccagcagcaagctgctgctcaggccgcactgcccacagagggcttggctccggct
gacagcctaaatgatccctcctcagaaagcaatggacacaacgagatcgccgccgctgcc
acaagtacagtagtcagactgctgcctagcacctcagcagagaccttggctccatccagc
acattagcacctgcagtagttgccagtccagctaaaatgcaggcagctgcagctctgact
gaagtggccaatggtattgtggctgtgaaacaaaaccctcccactgttacggtcaaacct
caagtgaagaaagaaaaccagtggtttgatgttggcattgtcaaagtgaccaatatggtt
gtaacacatttctacatgcctgcggatgactctgcttatgttgaggatgattctggcaca
atccctgactacagccagatgaagagggtggaccttcagcccgggacggcctacaaattc
cgtgtggcgggtataaacacgtgtggccgcggagccttttctgaaatatctgctttcaag
acttgtttgccaggcttcccaggggcaccgtgtgccataaagatcagcaagagtccagac
ggcgcccatcttacatgggagcctccatccgtgacatcaggaaagatcacagagtattct
gtgtatttggccatccagagcagccaggccaccgaggcaaaaccctcggccccggcccag
cttgccttcatgcgtgtttactgtgggccaaatccctcatgcctggtccagtcctccatc
ttgtccaacgcccatatagactataccaccaaacccgccatcattttccgcatcgcggca
cgcaacgagaaaggttacggcccggctacacaagtgcgatggctgcaagagtctaacaaa
gatggcctttctgcaaagcctgccccaaaaagagcagtttcttcaccagatacgaaaggg
attggtcagaagaaagcaagaatggaccagtga

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