Cyprinus carpio (common carp): 109098330
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Entry
109098330 CDS
T05134
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5-like isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109098330
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109098330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
PHD_2
DEAD
Chromo_MIT1
HMG_box
Motif
Other DBs
NCBI-GeneID:
109098330
NCBI-ProteinID:
XP_042589946
UniProt:
A0A9Q9WVV5
LinkDB
All DBs
Position
B11:13209876..13242932
Genome browser
AA seq
2011 aa
AA seq
DB search
MSRKSNIKRPVTEAVSLFPWDTRRAGSELREDEDEEGERRRSVPLSPLERFFSEDDSVKQ
HKKKKPSKIMEGKEPKVKKKKKKEGLPSGLDDMSDREDHGHQSGSESSTYSSLRKKKKKP
KEKKERKTKQRKKDDDEDDEDDDDGNLKEPKSSSQLMQEWGLEDVQYAFSEDDYKTITNY
KAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGTSATAVAAAVAAAVETVN
VAPPICIRSIQQISPSGPIKKAKTKEGKGPGAKKKSKPVKETKKKGKPKKSKSKAGQGGK
RKKGSSSEEDFLDDFSDFDDISIHSASVLSDTSAAPKKKSARQGRKKRKREDGDGYETDH
QDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDEEE
EEEVVGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCP
PLKGKVQKILHWAWSDPPLPPEVPLGRDGEKVDGLAKMPLKGRPERQLFVKWAGLSYWHC
SWVSELQLELYHAVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRRSKDPQYAAMEERYY
RYGIKPEWMIIHRIINHSFDKDGDVHYMIKWRDLPYDQCTWEADDFDIPDYDSFKQAYWD
HRNQVLGESHHPLLFRKGKNLKEEGKRREPPPDTPVVDPTIKFDQQPWYIDDTGGTLHPY
QLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIIN
WEREFEMWAPDFYIVTYIGDKDSRAVIRENEFTFEDSTIKSGRKVFRMKRDAPIKFHVLL
TSYELITIDQAVLGSVTWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNL
EELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAK
TELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAA
VEAPVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFE
GYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWN
PHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKTGS
MSKQELDDILKFGTEELFKDDVEAARTMAGDNKEGEEGSVIHYDDNAISKLLDRSQDATE
DTEIQNMNEYLSSFKVAQYVVREEDGEEEVQREIIKQEENVDPDYWEKLLRHHYEQQQED
LARNLGKGKRIRKQVNYNDASQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQS
RRQLKSDRDKPLPPLLARVSGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDL
RGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQE
FEHVNGKFSTPDLIPVGLELKKLTESVSSDPSTPVPASPVPTQPSTPVPSEKTESVSGSQ
EDKDITEPESTKSLDPEQPVMPEPSTAPEKTNEGEEPKSESPEGKGMEESEKNDTPLVHS
EPSSNQAQPPNKPSEQSANQTPLDCGKEKETSPERGENKPSPSKIDDKEQKPVSAAIPDD
LKSEDPPENQLNGEKDTRDDVDESHRDDKNSVKTRFMFNIADGGFTELHTLWQNEERAAV
SSGKMYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNK
FLARRFKLLEQALVIEEQLRRAAYLNMTQDPSHHAMALNTRFAEVECLAESHQHLSKESL
AGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRVPPVSARLQMSERGILSRLTSRG
NEPPPQQPFPQGSFGCSQMYNSGYAGGFRGPGGTAMVNYSQMPLGPYVSVSSNGPPAPTS
HLEKKASDALRDVATPDLKSGKPSDVICIED
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaaaatcaaatataaagcgaccggtgaccgaggctgtaagtcttttcccgtgg
gacacacgtcgtgcaggttcggaactgcgtgaggatgaggatgaggaaggtgaacgtcgg
aggagtgttcccctgtcacctttagaaaggttcttctctgaggatgattcggttaaacaa
cataagaagaagaaacccagcaagataatggagggaaaggagcccaaagttaagaaaaag
aagaagaaggaggggcttcctagtgggcttgatgacatgtcagacagagaggatcatggt
caccagtcaggaagtgagagcagcacctacagctccctgaggaagaaaaagaaaaagccc
aaagagaagaaggagaggaaaacaaaacagcgaaagaaagatgatgatgaggacgatgag
gatgacgatgatggaaacttaaaggagccaaagtcatccagtcagctgatgcaagagtgg
ggtcttgaagatgtgcagtatgccttctcagaggacgactataaaaccataaccaactac
aaagccttcagccagtttcttagacctctcattgccaagaagaaccccaagatccccatg
tcaaaaatgatgacggtgcttggagcaaagtggagagagtttagtgcaaacaaccctttc
aaaggcacctctgcaactgctgtagcggctgccgtagctgctgctgtggaaactgtcaat
gtggctccgcccatctgtattagaagtatccaacagatctcaccatctggcccaatcaaa
aaagccaaaaccaaagagggaaaggggcctggtgctaaaaaaaaaagtaagccagtgaaa
gaaacaaaaaagaaagggaaaccgaagaagtccaaatcgaaagcaggccagggtggaaaa
aggaaaaaaggctcttcgagcgaggaggatttcctggatgacttttcagactttgatgac
atcagcattcacagtgcctctgtactctcagacacttcagcggcacccaaaaagaagtca
gcccgccaaggacgaaaaaaaagaaaaagagaggatggagacggctacgagacagaccat
caagattactgtgaggtttgtcagcagggaggagagatcattctatgtgacacctgtccc
agagcatatcacctggtgtgtctggatccagaactggagaaagcccctgagggcaaatgg
agctgcccccactgcgaaaaagaaggcattcagtgggaggccaaagatgatgaggaggag
gaagaggaggttgttggtgaggaggaagatgaccacatggagttctgcagggtgtgcaag
gacggaggagagctgctgtgctgtgacacctgcccttcctcctaccacatccactgtctc
aacccaccacttcctgaaattcccaatggagaatggctgtgtccacgatgcatgtgtcca
ccgcttaaaggcaaagtccagaagattctgcactgggcgtggagcgatcctcctctacca
cctgaggttccccttgggcgagatggagagaaggtggatggtttggccaaaatgcccctg
aagggtcgtccagagaggcagctgtttgtcaaatgggctgggctgtcctactggcactgc
tcctgggtcagcgaactacagttggaactatatcatgcagtaatgtaccgtaactaccag
cggaagaatgacatggacgaaccgccaccatacgactatgggtctggggaggaggaactt
aacagcgagaagaggaggagcaaagaccctcagtatgcagctatggaggaacgatactac
cgttacggcatcaagccggagtggatgatcattcaccggatcatcaaccacagttttgat
aaggatggagatgtacactacatgattaagtggagagatttgccgtatgatcagtgcacc
tgggaggctgatgactttgacatcccagattatgacagctttaaacaagcctactgggac
cacaggaatcaggtgctcggtgaaagccatcaccccctgctgttcagaaagggaaagaac
ctcaaagaggaaggaaagaggagagaacctccaccagacactccagttgtggatcctacc
atcaagtttgaccagcagccatggtacattgatgacacagggggaactttgcacccatac
caactggaaggcctgaactggttgcgattctcttgggcccaaggaaccgacacaatcttg
gctgatgaaatgggtcttggcaagactgtgcagactatagtgttcctgtactcactctac
aaagagggtcactccaaagggccttttctggtcagtgcgccactctccaccatcatcaac
tgggagagagagtttgagatgtgggctccggatttctacattgtgacttacataggggac
aaagacagcagggctgtcatacgtgagaatgaatttaccttcgaggacagcaccatcaaa
tcaggtcgcaaggttttccgcatgaagagggatgcaccgataaagtttcatgtcctgctg
acgtcatatgaactgatcaccattgatcaggcagtacttggctccgttacctgggcctgt
ctggttgtggatgaagcccaccgactgaagaataaccagtcaaagtttttcagaattctg
aatggctacaaaatctactataagctgctcctgactggaacccctttgcagaacaatctc
gaagagctttttcacctgctcaactttctcaccccggagcgcttcaataacctggagggc
tttctggaggagtttgcggacatctcgaaagaggaccagattaagaaactacacgacctg
ctggggccacacatgctcaggagactgaaggcagatgtgtttaaaaacatgccagcaaaa
actgagcttatagtgcgagtagagctcagcccaatgcagaagaaatactacaagttcatt
ttaacacgtaactttgaggcattgaattccaagggaggagggaaccaggtgtctcttctt
aacatcatgatggatttgaagaaatgctgcaatcatccctacctgtttccagtggctgca
gtggaagctccagtcttacccaatggttcttatgatggcaacctcctggtgaaatcctca
ggaaaactcaccctgcttcagaagatgctcaaaaaactgaaagatgaaggccacagggtt
ctcatcttctctcagatgacaaagatgctagatctgctagaggacttcctggagtttgag
gggtataaatatgagcgcattgatgggggcatcacaggggggctgcgacaggaggccatc
gatcgatttaacgcacccggggctcagcagttctgttttctgctgtctacacgtgctgga
ggattgggtatcaatctggcaaccgcagacacagtgatcatatatgactctgactggaac
ccacacaatgatattcaggcatttagcagggcacatcgtatcgggcaaaataaaaaggtg
atgatctatcgctttgtaactcgggcatccgtagaggagcgtattacccaggtagccaag
cggaagatgatgttaacccatctggtggtgcgtcccggcttgggctctaagacgggctcc
atgtccaaacaggaactagacgacatcctcaagtttggcactgaggagctttttaaagat
gacgtggaagccgccagaacgatggcaggagataataaagaaggagaggagggcagtgtg
atccactacgatgataacgccatttccaaactgctggaccgtagccaggatgccaccgaa
gacacagagatccagaacatgaacgagtacctgagctcattcaaggtggctcagtatgtt
gtgagagaggaggatggagaggaagaggtccagagggagattattaagcaggaagagaat
gttgatccagactactgggagaagctcttgaggcaccattacgagcagcagcaggaggat
ttggcccggaacctgggcaaagggaaacgcatccgcaaacaggtcaactataatgacgcc
tctcaggaggaccaagagtggcaagatgatctttcagataatcaatctgagtactccgtc
gggtccgaggatgaggatgaagattttgaggaacgtcctgaaggaggacgcagacaatct
cgcagacagttgaagagcgatcgggacaaaccattgccaccgttgctggctagagttagt
ggaaacatagaggttttgggatttaacgcccggcagcggaaagccttcctgaatgcgatt
atgcgctggggtatgcccccacaagatgccttcaactctcactggctggtccgtgacctg
agagggaaaagtgagaaggagttcagggcttatgtatctctgttcatgaggcacctgtgt
gagccaggggcagatggagcagagacatttgcggatggagtcccgagggaaggtctatcc
cgccaacatgttctcacccggatcggtgtcatgtctctggtccgcaagaaggttcaggag
tttgagcatgtgaatgggaagtttagtacaccagatttgattcctgtgggattggagctg
aaaaaacttactgaaagtgtctcgtcggaccccagtacgcctgttcctgccagtccggtt
ccgactcaacccagcacaccggttccttcagaaaagacagagtcagtgtccggttctcaa
gaagacaaggacattacagaaccagagagtaccaaatcactggaccctgagcagccagtt
atgccagaaccctccactgcaccagagaaaaccaatgagggagaagaaccaaaaagcgaa
agtccagaaggaaaaggaatggaagagagtgagaagaatgacacccctcttgtccattca
gagccatcgtccaatcaagcacagccacctaataaacctagtgagcagtcagccaatcag
acacctttagactgtggtaaagagaaagaaacttctccggagagaggggaaaataaaccc
agcccatcaaaaatagatgataaggagcaaaaaccagtttctgcagccattcctgatgat
ttaaaatctgaagacccccctgagaaccaactgaatggagagaaagacacgagggacgac
gtggatgagagccacagagatgacaagaacagcgtcaagactcgtttcatgtttaacatc
gcagatggaggattcacagaattacacacgctatggcagaatgaggaacgcgcagctgtg
tcatctggcaaaatgtacgacatctggcaccgtcgtcatgactactggctgctagctggc
atagtaacacatggctatgcccgctggcaggacattcagaacgacccacggtacgccatc
ctcaatgagcctttcaagactgaaatgcacaaggggaactacttagaaatgaagaataaa
tttcttgccagacgttttaagctcctggaacaggctttggtaattgaggagcagcttcgg
cgcgcggcatacctgaatatgactcaggatcccagtcaccacgccatggccctcaacaca
cgattcgcagaggtggagtgcctggctgagtcccatcagcacctctccaaagagtcactt
gctggtaacaagccagccaatgctgtgctgcacaaagtgttgaatcagctggaggagctg
ttaagcgatatgaaagctgatgtgacgcggttgccctccatgctttcgcgggtccctccc
gtgtccgcccggctccagatgtcagagcggggcatcctcagcagactcaccagccggggc
aacgagccgccacctcagcagcctttccctcagggctctttcggctgttctcagatgtat
aatagcggttatgccggagggttccgtggacctggaggcactgcgatggtgaactacagc
cagatgcccctggggccgtatgtcagcgtgtcctcaaacggacctccggccccaaccagc
cacctagagaagaaggccagtgatgctctgcgagacgtggctacacctgatttgaaatca
ggcaaacctagtgatgttatatgcattgaggactag
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