Cyprinus carpio (common carp): 109098639
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Entry
109098639 CDS
T05134
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
109098639
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccar01009
]
109098639
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109098639
Protein phosphatases and associated proteins [BR:
ccar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109098639
Cell adhesion molecules [BR:
ccar04515
]
Cadherins
Protocadherins
109098639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
FAM176
Cadherin_4
CD34_antigen
DUF4139
Motif
Other DBs
NCBI-GeneID:
109098639
NCBI-ProteinID:
XP_042590568
UniProt:
A0A9Q9WW06
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Position
B11:complement(22584171..22588279)
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AA seq
877 aa
AA seq
DB search
MWNTKRGPCLHSKGELWGLFILLLYTSPLCCSSNFSHLIYKIKEGLPEGILIGAISADLK
LDLSVSPPRLFNLELKTDNQQYVNLNNTTGELFTSAVEIDREALCAESHEGQGCAIFLDV
LILPQQYFQLVKVKIIIEDVNDNRPHFPVDEIRVSVPENAPVNARFAVEQSAVDPDIGIH
SVQTYWLVNDYGVFTLDVEENEGGELTPFLIITESLDRETQAEYVTDIIAEDGGSPPLLG
TATLKIIITDINDNCPKFTESLVNVTLYGNTTKGMQLARLQAYDPDEGANALITYTFSER
VTQESRNLFHLDTNTGVLKLAGKIDNNTGKLYKLIVLANGPTCIPEVATVTIHIIKQLSG
PPVVIPRYIASEKDGVVSLSESEPPFSPIAFFTIKNTEPQQKIECLLEGAGPFRLVPYEQ
FKNEYLLETTELLDYEQQQDYEIVIVVRNSHGLVVNTVVKVHVLDVNDNAPVFKQSFIDI
TVEENNPPNTFLAQLQATDADSESRGEVYYLLGADAPTIFDLDRSTGVLTVSTSLDREEK
ETYRFMVRAVDRGTPRKESIATVIITVQDRNDNSPRFINKDFTFFVPENFPGFGEIGVLT
VTDADAGENGWVALSILNGSDIFVIDTGRGALRAKTSLDREQQGTYYVWIEAIDGGEPAL
SCITTVTVLLLDVNDNPPTVLFPQSNQSYMLVLPNTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRTDGEPGSFDIDPYTGNITLRKSLSNRGLYSLWVKVRDHGQPELYSTVLVNLFVNE
TVSNETLIQSLLPRSVDIDHGELPPDKKGRKGEQVPNMCGEYQVLLLALTATCLGLFLTV
VSLVTYICCKKRKPKKKRSDIEIPLNLFKNPMEISNI
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacactaaaagaggaccctgcctgcacagcaaaggagagttatggggtttgttc
atcctcctcttgtacaccagtcccctctgctgctcgtcaaatttcagtcacctcatctat
aagataaaagaaggattacctgaagggatactcataggggctatcagtgcggacttaaaa
ttggatctttctgtcagtcctcctcgtttattcaatctggagctaaagacggacaaccag
cagtatgtgaatctgaataacacgacgggggagctgttcacatctgctgtggagattgac
agagaggctctgtgtgcggagtcccacgagggccagggctgcgcaatctttctggacgtg
ctaatccttcctcagcagtactttcagctggttaaggttaaaattattattgaggatgtg
aatgacaaccgcccgcatttccctgttgacgaaatcagggtgtctgtgccggagaacgca
cctgttaacgcaaggtttgcggtggagcaatccgcagtggatcccgacatcgggattcac
agcgttcaaacatactggcttgttaatgactatggagttttcacattagatgtagaggag
aacgaaggcggtgaactgacgccctttctcatcattaccgagtctcttgatagggagaca
caagctgagtatgtgactgacattatagccgaggacggaggctctccgccgcttctaggc
actgcaactctgaagattatcatcacagatatcaacgacaactgccccaagtttacagag
tcgctagtgaacgttactctttacggaaacactactaagggcatgcaactggctcgtcta
caagcctacgatccagacgagggagccaacgccttgatcacgtataccttcagcgaacgg
gtcacccaggaaagcagaaacctgtttcatttggatacaaacactggggttcttaaacta
gcaggaaagattgacaacaacactggaaaactctacaaactaatcgtgctggctaatgga
ccgacttgtattccagaagttgcaacggttaccattcacatcatcaaacagctctccggc
cctccggtggttatcccacgttatattgcgtccgagaaggatggtgttgtgagtttaagt
gaatcagagccaccgttttcacccattgctttttttaccatcaaaaacactgagccacaa
cagaagatagagtgtcttcttgaaggtgcaggtccatttaggcttgtaccatatgagcag
tttaaaaacgagtacctgcttgagaccaccgagctattggattatgagcagcaacaggat
tatgaaattgttattgtggttcgtaactctcatggattagtagttaacaccgtagtgaaa
gtccatgtgttggacgttaacgacaacgctccggttttcaagcagtctttcattgacatc
acagtggaggagaacaacccaccaaatacattcctcgctcagcttcaggccaccgatgca
gacagtgaaagcagaggcgaggtgtattacctactcggtgccgacgctcccaccattttt
gacttggatcggtcaaccggggtactgacggtgtctacttctcttgaccgagaggaaaag
gagacttaccgattcatggtgcgggccgtagaccggggcacaccaagaaaggagtcaatc
gccactgtgattattaccgtccaggatcggaatgacaacagtccaaggttcatcaacaag
gacttcaccttctttgtgccggagaactttccaggttttggggaaattggtgttcttact
gtcacagatgcagatgctggggagaacggctgggtggcgttgtccatccttaatgggagc
gacatcttcgtgattgacaccggacgaggagcgctgcgggccaagacctctctggaccgg
gagcaacagggaacgtattacgtttggatcgaggcaattgatggaggcgaacctgctctt
tcttgcatcacaacggtgactgttctcctcctggatgtcaacgataaccctccaactgtt
cttttcccccagtccaaccagtcgtacatgttggtacttcccaacacgcttccgggaaca
tccataacggaggtctacgcggtggaccgggacactggaatgaacgctgttattgcatac
agcatcatcaagagaacagatggagagccaggctcgtttgacatcgacccctacacggga
aacatcaccttgaggaaatccttgagcaatcgaggcctctacagtttgtgggtcaaagtc
agagaccacggtcaaccagaactctactctaccgtactggtcaacctgttcgtgaatgaa
acagtcagcaatgagaccctcattcagagtttgttgcccagaagtgtagatattgaccat
ggtgagcttcctcctgataaaaaagggaggaagggagaacaagtgccaaacatgtgtggc
gagtaccaagtgttactgcttgcactgacagctacctgcctgggattgtttctgaccgtt
gtgtcgttggtgacatacatttgctgcaagaaaagaaaaccgaaaaagaagaggtcagac
attgagattcctttaaatctctttaagaacccaatggagatttcaaacatctga
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