Cyprinus carpio (common carp): 109098640
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Entry
109098640 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
109098640
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccar01009
]
109098640
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109098640
Protein phosphatases and associated proteins [BR:
ccar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109098640
Cell adhesion molecules [BR:
ccar04515
]
Cadherins
Protocadherins
109098640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
FAM176
TM_ErbB1
DUF4139
Motif
Other DBs
NCBI-GeneID:
109098640
NCBI-ProteinID:
XP_018967773
Ensembl:
ENSCCRG00000018248
UniProt:
A0A9Q9VEU4
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All DBs
Position
A11:complement(23678154..23682346)
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AA seq
887 aa
AA seq
DB search
MWNTKRVPCLHSKGDLWGLFILLLYISPLSCSSNFSHLSYKIKEGLPKGTLIGAISADLK
LDLSVSPPRSFNLELKTGSQQYVNLNNTTGELFTSAMEIDREALCAESHEGQGCAIFLDV
LILPQQYFRLVKIKIIIEDVNDNHPHFPVDEIRVSVPENAPVNARFAVEQSAVDPDIGIH
SVQTYWLVNDYGVFTLDVEENEGGELTPFSIITESLDRETQAEYVTDIIAEDGGSPPLLG
TATLRIIITDVNDNCPKFTESLVNITLYGNATKGMQLARLQAYDPDEGANALITYTFSER
VTQESRNLFHLDTNTGVVIIVGRLIEKKEGYIYKLIVLANGPTCIPEVATVTVHIIKQLS
GPPVVIPRYIASEKDGVVSISESEPPFSPIALFTIKNTEPQQKIECVLEGAGPFRLVPYE
RFKNEYLLETTELLDYEQQQDYEIVVVVRNSHGLVVNTVVKVHVLDVNDNAPVFKQSFID
ITVEENNPPNTFLAQLQATDADSESRGEVYYLLGTDAPTIFDLDRSTGVLTVSTSLDREE
KETYRFMVRAVDRGTPRKESIATVIITVQDRNDNSPRFINKDFTFFVPENFPGFGEIGAL
TVTDADAGENGWVALSILNGSDIFVIDTGRGALRAKTSLDREQQGTYYVWIEAIDGGEPA
LSCITMVTVLLLDVNDNPPTVLFPQSNQSYMLVLPNTLPGTSITEVYAVDRDTGMNAVIA
YSIIKRTDGELGTFDIDPYTGNITLRKSLSNRGLYSFVGLWVKVRDHGQPELYSTVLVNL
FVNETVSNETLIQSLLPRSVDIDHGALPPDKEGRKGEQVPNLCGEYQVLLLALTATCLGL
FLTVLSLVTFICCKKRKPKKKRLESEIPLNLINQETVVRNLMEISNI
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacactaaaagagtaccctgcctgcatagcaaaggagacttatggggtttgttc
atcctcctcttgtacatcagtcccctctcctgctcttcaaatttcagtcacctcagctat
aagataaaagaaggattacctaaagggacactcataggggctatcagtgcggacttaaaa
ttggatctttccgtcagtcctcctcgctcattcaatctggagctaaagacaggaagccag
cagtacgtgaatctgaataacacgacgggggagctgttcacatctgccatggagattgac
agagaggctctgtgcgcggagtcccacgagggccagggctgcgcaatctttctggatgtg
cttatccttcctcagcagtactttcggctggttaagattaaaatcattatagaggatgta
aatgacaaccatccgcatttccctgtcgatgaaatcagggtgtctgtgccagagaacgca
cctgttaacgcaaggtttgcggtggagcaatccgcagtggatcccgacatcgggattcac
agcgttcaaacatactggcttgttaatgactatggagttttcacattagatgtagaggag
aacgaaggcggtgaactgacgcccttttctatcattaccgagtctcttgatagggagaca
caagctgagtatgtgactgacattatagccgaggacggaggctctccgccgcttctaggc
actgcaactctgaggattatcatcacggacgtcaacgacaactgccccaagtttacagag
tcgctagtgaacattactctttatggaaacgctactaagggcatgcaactggctcgtcta
caagcctacgatccagacgagggagccaacgccttgatcacgtataccttcagcgaacgg
gtcacccaggaaagcagaaacctgtttcatttggatacaaacactggggttgttattata
gtaggaagattgattgaaaaaaaggaaggatatatatacaaactaatcgtgctggctaat
gggccgacttgtattccagaagttgcaacggttactgttcacatcatcaaacagctttcc
ggccctccggtggttatcccacgttacattgcttctgagaaggatggtgttgtgagtata
agtgaatcagagccaccgttttcacccattgctttgtttaccatcaaaaacactgagccg
caacagaagatagagtgtgttcttgaaggtgcaggtccatttaggcttgtaccatatgag
cgttttaaaaacgagtacctgcttgagaccaccgagctattggattatgaacagcaacag
gattatgaaattgttgtcgtggttcgtaactctcatggattagtagttaacaccgtagtg
aaggtccatgtgctggacgttaacgacaatgctccggttttcaagcaatctttcattgac
atcacagtggaggagaacaacccaccaaatacattcctcgctcagcttcaggccaccgat
gcagacagtgaaagcagaggcgaggtgtattacctactcggcaccgacgctcccaccatt
tttgacttggatcggtcaaccggggtactgacggtgtccacttctcttgaccgagaggaa
aaggagacgtaccgattcatggtgcgggccgtagacaggggcacaccaagaaaggagtca
atcgccactgtgataatcaccgtccaggatcgcaatgacaacagtccgcggttcatcaac
aaggacttcaccttctttgtgccggagaactttccaggttttggggaaattggcgctctt
actgttaccgatgcggatgctggggagaatggctgggtggcattgtccattcttaatgga
agcgacatcttcgtgattgacaccggacgaggagcgctgcgggccaagacctctctggac
cgggagcaacagggaacgtactatgtttggatcgaggcaattgacggaggcgaacctgct
ctttcttgcatcacaatggtgactgttctcctcctggatgtcaacgacaaccctccaact
gttcttttcccccagtccaaccagtcgtacatgttggtgcttcccaacacgcttccagga
acgtctataacggaagtttacgcggtggaccgggacactggaatgaacgctgttattgcg
tacagcatcatcaagagaacagacggagagctgggcacgtttgacatcgacccctacacg
ggaaacatcaccttgaggaaatccttgagcaatcgaggcctctacagttttgtgggtttg
tgggtcaaagtcagagaccacggtcaaccagaactctactctaccgtactggtcaacctg
tttgtgaatgagacagtcagcaatgagaccctcattcagagtttgttgcccagaagtgta
gatattgaccatggtgcgcttcctccagataaggaagggaggaagggtgaacaagtgcca
aatctgtgtggcgagtaccaagtgttactgcttgcactgacggctacctgccttggattg
tttctgaccgttttgtcgttggtgacgttcatttgctgcaagaaacgaaaaccgaaaaag
aagaggttagagagtgagattcctttaaatctcatcaaccaagaaacggtggtcaggaac
ctaatggagatttcaaacatctga
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