Cyprinus carpio (common carp): 109098733
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Entry
109098733 CDS
T05134
Name
(RefSeq) neogenin-like
KO
K06766
neogenin
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04350
TGF-beta signaling pathway
ccar04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109098733
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109098733
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109098733
Cell adhesion molecules [BR:
ccar04515
]
Immunoglobulin superfamily
DCC/UNC5 family
109098733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Neogenin_C
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
fn3_SORL1
C2-set_2
fn3_2
Tissue_fac
Unc5_NetrinR_N
Motif
Other DBs
NCBI-GeneID:
109098733
NCBI-ProteinID:
XP_042570939
UniProt:
A0A9Q9ZR68
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All DBs
Position
A25:complement(2167301..2280847)
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AA seq
1425 aa
AA seq
DB search
MADPPRLLVFFASLISLRFCGADKGSDIRGFTPFQFVVEPVDTLAVRGLPAVLNCSAASD
APVRVEWKKDGTFLNLVADDRKRQLADGSLLISAVVHSKHNKPDEGVYQCVATIDNLGTI
SSRTACLTVAGLICSLTQHYRVSVRSGGTEMLSCEVTEELAPFTRWERDGRPVELDGRVI
QLPSGALVISNGSQSDAGLYRCSIDGLGPAKTTDEAQLQVSADSGVEEKLETLQGPVAVV
KVVGESVLLPCVMKGYPVPVIRWTLNDRPIDESRERFAVIGGGSLQIVNLTEEDAGIYVC
QADSGNMTSEIQAELTVHVPPRFLTRPSNTYAQESMDIIFECDVTGSPPPTVKWMKDGDT
VIPSDYFRMKQHNLQVLGLVKSDEGFYQCLAENDAGNVQASAQLIILDLDVALPSAVPSL
TDATTDHVASGPSERNDPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGENITYSVFYSLE
GTNRERVENTSGPGEMQVTIQNLVPDTKYTFRVVASNANGPGESSTPLTVATQLEVQVPG
PAPNLQVVSVGTSSVTLSWDRPVTGNGEIQTYRLFYSEKGRDSEQDVDVTGLSYTMTGLK
TFTEYSFRVVAYNKHGPGVSTEDVVVRTLSDVPSAAPQNLTLEVLNSTSIMVRWQPPPAG
TLNGELTGYRLRYRKGLRRADAAEISTSQLFQLIEGLEKGKVYTVRVSASTVNGSGPTTE
WIAAETFENDLDESQVPGVPSSLHVRPLVNRIVVSWTPPENQDVLVRGYKIGYGIGSPHA
HTVTLDYKQRFYSIDNLDPSSHYVITLKAFNNMGEGIPIYNSATTRPQSDPIDPDIDFYE
LFNNPYTPAPDPTPMLPPVGVQATVLSHDTVKVSWADNSLAKNQKITDSRYYTIRWKTNI
PANTKYKTANTTTLFHTVTALKPNTLYEFSVMVTKSRRSSTWSMTAHGTTFESIPSSAPK
DVTVISKEGNPRIININWQPPTEANGKITGYIIYYSTDVDAEVHDWVVEPVLGNRLTHQI
QGLTLDTTYYYKIQARNSKGMGPMSDAVQFHTPKAEPSDKMSSDQGLQVKPGHPTLPEHG
IGSNMDKPGITGRQEKRVLVIVVIVSVGVFTIIAVIAGAVLCTRRQNTTQEELKRAACKS
STGSHKYKNSSKDLNPPDLWIHHERLELKPMDKSPEPNPVMTETPIPRTAQDPAAEPSHQ
RRGHEAEESRRGGRPKMMMPFDSQPPQPVISAHPIHSLDHLHHHHHHYHLPPRGYLHHQI
SLRAPATPSVFSDRPPSAESVRNQPPAPEPPVAPSQPSTTAEHQKTEALIKEEPSINPPT
AHVRPTHPLKSFAAPAITVSTHNPPTYETTLPSTPLLAQPVPGVKTASIGTLIRARAPMA
VTVPSAPDQSETSTMLDTTYETDELSEEMAHLEGLMKDLNAITTD
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccccccacggctgctcgtgtttttcgcaagtctcatctctctccggttctgc
ggcgcggataaaggttctgacattcgaggctttaccccgttccagttcgtggttgaaccc
gtcgacacactggctgtacgcggcctccccgctgtcctgaactgctcggccgcgagcgac
gctccggtgagggtggaatggaagaaggatggaacgttcctgaacctggtagcggacgac
cggaagcggcagctggccgacggctctttgctcatcagtgcggtggtccactccaaacac
aataagcctgatgagggcgtgtaccagtgcgtggccaccatcgacaatctgggcaccatc
agcagccgaaccgcatgcctcacagtggcaggtctgatctgttccctcactcagcactac
cgcgtttctgtgcgctcgggcggcactgagatgctgagctgtgaggtgacggaagagctc
gccccgttcacccgctgggagagagacggtcggcccgtggagctggacggcagggtcata
cagctgcccagtggagctctggtcatcagcaacggctcccagagcgacgccggactctac
cgctgcagcatagacggtctgggaccggccaaaaccacagacgaggcacaactacaggtg
tctgcagattcgggtgttgaagaaaaactggagactctccagggccccgttgctgtggtg
aaggttgtcggggagagcgtgttgttgccatgcgtcatgaagggatacccagtgccagtg
attcgctggacgcttaacgaccggccgattgacgagagccgtgagcgtttcgctgtgatt
ggtggaggaagcctgcagatcgtcaacctgaccgaagaggatgctgggatatacgtctgt
caggcggacagcggcaacatgaccagcgagatccaggcagagctcacggtgcacgttcct
cctcggttcttgacgagaccctccaacacttacgcccaggagtccatggacatcatcttt
gagtgtgacgtcaccggctcaccgccgcccaccgtcaagtggatgaaggatggagatacg
gtcattcccagtgattatttcaggatgaagcagcataacttgcaggttttgggtttagta
aaatccgatgaaggtttttatcagtgtttagcagagaacgacgctgggaacgtccaggcc
agcgctcagctgatcatactggatttagacgttgcccttccttctgctgtcccttcactg
accgatgccactactgaccatgtagcgtccggcccatccgagcgcaacgacccgacgccc
tccgccccccgcgatgtcgtggcatctctagtgtccactcgattcatcaagctgacgtgg
cggcttcctgccgagcctcacggggagaacatcacctactctgtgttctacagtctggaa
ggcactaacagggagcgtgtggagaacaccagcggaccgggagagatgcaggtcaccatc
cagaacctcgttcctgacaccaagtacacctttcgggtggtcgcgtccaacgctaacggc
ccgggcgagagttccaccccacttacagtggccacccagctggaggttcaggtcccgggt
ccggctccgaatctgcaggtggtctctgtcggcacctcctcggtcacactgagctgggac
agacccgtgactggaaacggtgagatccagacctacagactcttctacagcgagaagggc
cgagactcggagcaggacgtggacgtcacgggtctgtcctacaccatgacgggcctcaag
acgtttacagagtacagtttcagggttgtggcgtacaacaaacacggccccggtgtctcc
actgaggatgttgtggtccggacgctgtctgacgtgccgagcgccgctccgcagaacctc
actctggaggtcctgaactcaacgagcatcatggtccgatggcagccgcctcccgctggt
accctgaacggagagctgacggggtataggttacgctaccggaaggggctcaggagagca
gacgcagcagagatctcaacctcacagctcttccagctcattgagggtctggagaaagga
aaggtctacactgtgagagtgtcagccagcaccgtgaacggatccggaccgacgacggag
tggatcgcagccgagaccttcgagaacgacctggacgagtctcaggttccaggagtcccg
agttctcttcatgttcgtccgctggtgaaccggatcgtggtgagctggactcctccagaa
aaccaggacgttttagtgcgaggttataagatcggatacgggatcggcagccctcatgcc
cacacggtcactctggattacaagcagcgcttctacagcatcgataacctcgatcccagt
tcacattacgtcatcaccctcaaggcgttcaacaacatgggcgaaggcatccccatctac
aacagcgccaccaccagacctcagtccgaccccatagaccctgatattgatttttatgaa
ctctttaataacccatacaccccagcacccgaccccacacccatgctgcccccggtgggc
gttcaggccaccgtcctcagccacgacacggtcaaagtcagctgggccgacaactcactc
gccaagaaccagaagatcaccgactccagatattacaccatccgctggaagaccaacatc
cccgccaacaccaaatacaagacggcaaacaccacgaccctgttccatacagtgacggct
ctgaaacccaacacgctttatgagttctccgttatggtgaccaagagccgcaggagcagt
acgtggagcatgacggcccacgggaccacctttgagtccattcccagctctgctccgaaa
gatgtgactgtgatcagtaaagaaggaaatcctcgaatcatcaacatcaactggcagcct
ccgactgaagccaacggcaaaatcacagggtacatcatctactacagcaccgatgtggac
gctgaggtccatgactgggtggtggagcccgtgctggggaacagactgacccatcagatt
caggggctgacgctggacaccacatactactataagatccaggccagaaactccaaaggc
atgggacccatgtcagacgcggtgcagttccacacccccaaagcggaaccatcagacaaa
atgtccagtgatcaagggctgcaagtcaaacccggtcacccgaccctcccggagcacggg
atcggatcaaacatggataaaccaggcatcacgggccgccaggagaagcgtgttctggtg
atcgtggtgatcgtgtctgttggtgtgttcactatcatcgctgtgatcgcgggggccgtc
ctgtgcacgcgccgccaaaacacaacacaagaagaattgaaacgtgcggcctgtaagtcc
agcaccggctcgcacaagtacaagaattcatctaaagacctaaatcctcctgatctgtgg
atccatcacgagcgtctggagctcaaacccatggacaaatcacccgagcccaaccccgtc
atgacagagacgcccatcccgcggaccgcccaggaccccgccgcggagcccagccatcag
agacggggtcatgaggcggaggagagtcggaggggagggagacccaaaatgatgatgccg
ttcgactctcagcctcctcagcctgtgattagcgctcaccccatccattccctcgatcat
cttcatcaccatcatcatcactatcacctcccgcctcgcggctaccttcatcaccagatc
agcctgagagcgcctgccacgccgagtgtgttctcagacaggcctccgtctgcagaatct
gtgaggaatcagccccctgcacctgaacctccggttgcccccagtcagcccagcactaca
gctgagcatcagaagacagaggcactgatcaaagaagagccgagcataaacccaccgacg
gcccacgttcggcccacacacccactcaagagcttcgccgctccagccatcactgtttcc
acccataacccgcccacctacgagaccacattacccagcacccctctgctggcacagcct
gtgcccggcgtgaagacagcgtctatcgggacattaattcgagctcgagctccgatggca
gtaacagtccccagtgctcctgaccaatcagaaaccagcacgatgctggacacgacgtat
gagacggatgaactctcggaggaaatggcccacctggagggtctgatgaaggacctgaac
gccatcaccacggactga
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