Cyprinus carpio (common carp): 109098812
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Entry
109098812 CDS
T05134
Name
(RefSeq) small nuclear ribonucleoprotein E-like
KO
K11097
small nuclear ribonucleoprotein E
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109098812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109098812
03041 Spliceosome [BR:
ccar03041
]
109098812
03032 DNA replication proteins [BR:
ccar03032
]
109098812
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
109098812
Spliceosome [BR:
ccar03041
]
Complex A
U1 snRNP components
Sm proteins
109098812
U2 snRNP components
109098812
Complex B
U1 snRNP components
109098812
U4/U6.U5 tri-snRNP components
109098812
Complex C
U2 snRNP components
109098812
DNA replication proteins [BR:
ccar03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
109098812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
DUF777
Motif
Other DBs
NCBI-GeneID:
109098812
NCBI-ProteinID:
XP_018967876
Ensembl:
ENSCCRG00000049601
UniProt:
A0A8C1KJQ2
LinkDB
All DBs
Position
A11:21437041..21439855
Genome browser
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
SEEVHMKTKNRKPLGRIMLKGDNITLLQSVSN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagaggacaaggacagaaggttcagaaggtcatggtgcagccgatcaacctt
attttcaggtatctgcagaatcgttcccgaatccaggtgtggctctacgaacaggtcaac
atgcggatagagggctgcatcattggatttgatgagtacatgaatttggttttggatgac
tcagaggaggttcacatgaagaccaagaacaggaagcccctggggcggattatgttgaaa
ggagataacatcacattgctgcagagtgtgtccaactga
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integrated database retrieval system
