Cyprinus carpio (common carp): 109098896
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Entry
109098896 CDS
T05134
Name
(RefSeq) serine/arginine-rich splicing factor 1B-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109098896
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109098896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109098896
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
SR proteins
109098896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
TP2
Motif
Other DBs
NCBI-GeneID:
109098896
NCBI-ProteinID:
XP_042604169
Ensembl:
ENSCCRG00000029309
UniProt:
A0A8C2AA67
LinkDB
All DBs
Position
B21:16574068..16578102
Genome browser
AA seq
244 aa
AA seq
DB search
MSGGVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEF
EDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGVGAPRGRYGPPSRRSEYR
VIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRS
HEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRS
RSRT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcggtgtaattcgagggcctgcagggaacaacgactgtcggatatacgttggt
aatttaccccccgatattcgcaccaaggacgtagaggatgtgttttataaatacggagcc
attcgggatatcgaccttaaaaacagaagaggaggtccgccgtttgcgttcgtggagttc
gaggacccgagagatgcagaggatgctgtgtatggacgagatggctatgactatgatggc
tatcgtcttcgagtggagttcccaaggagtggcaggggaggtggaagaggtggaggtggt
ggtggagttggagctcccagaggcagatacggccctccatccaggcgttcagagtacagg
gtcatagtgtcaggacttcctcctagtggcagctggcaggaccttaaggatcacatgcgt
gaagcaggtgatgtatgttatgctgacgttttccgagatggcaccggcgttgtggagttt
gtgcgcaaagaagacatgacctacgccgttcgaaagctggataacactaagttccggtca
catgagggagagacggcttacattcgggttaaggtggacggcccgcgcagccccagttac
gggcgctcgcgctctcgcagccgcagcaggagtcgcagccggagcaacagccgcagtcgc
agctactctccacgccgcagccgaggatcgccgcgttactcgccccgccacagccgctcc
cgttcccgcacctaa
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integrated database retrieval system
