Cyprinus carpio (common carp): 109099274
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Entry
109099274 CDS
T05134
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04145
Phagosome
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109099274
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109099274
09144 Cellular community - eukaryotes
04510 Focal adhesion
109099274
09142 Cell motility
04820 Cytoskeleton in muscle cells
109099274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109099274
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109099274
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109099274
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Phagocytosis
Opsonins
109099274
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109099274
Exosomal proteins of colorectal cancer cells
109099274
Exosomal proteins of bladder cancer cells
109099274
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109099274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_1
TSP1_spondin
VWC
TSP_3
TSP1_CFP_C
EGF_3
TSP1_CCN
Laminin_G_3
TSP1_ADAMTS
cEGF
EGF
DUF3972
Motif
Other DBs
NCBI-GeneID:
109099274
NCBI-ProteinID:
XP_042591663
UniProt:
A0A9Q9WY12
LinkDB
All DBs
Position
B12:16939543..16955179
Genome browser
AA seq
1149 aa
AA seq
DB search
MILRRCLRNLALLLLFTFVKSQDAHLEDETVFDLFETSGITRKTIGVKLFKGLDSDAPAY
RFIRFDQVPSVSSTAVQKLLLQIQNNEGFILTATLRQDRTSRGTILALEGPGERRQFEVV
SDGRTNTLDLVYWWADGSRNVISFEDVDLSDSQWKNVTLHVHGETATLYIGCALIDSFIL
DEPFYEHLSATGARMYVAKGATRESHFRGLLQNVRFIFDTPLEDILESRGCDLGNPEEAN
VVSESAEVVEVEVPSSIATNVIGQNTDVPATSSSELMCERSCEELANLFQELKGLRVVVS
NLIDGLQKVTEENTAMKEALNKMQSLSEQTICWQDGRMFEDKEDWIVDSCTKCTCQEGKV
VCRQITCPPVACANPSFIDGECCPVCLPMDSEDGWSPWSEWTQCTVTCGSGTQQRGRSCD
DTSNTCSGPSIQTRKCSLGKCDRRVRQDGGWSLWSPWSSCSVTCGEGLITRIRHCNAPVP
QRGGKDCEGDGRETQSCRLDPCPIDGGWGPWSPWAMCSATCGGGLKSRVRECNSPEPQHG
GRKCLGDSTENEVCNRQECPVDACLSNPCFSGVECITASDGSWECGPCPNGYRGNGTFCE
DVNECDMVSDLCHKVGGLQQCVNTDPGFHCLPCPPRYKGTQPYGMGVESAKINKQVCEPY
NPCKDNSHSCHKYAECIFLSHFSDPMYKCECRIGYAGDGIICGEDYDLDGWPNQDLVCGA
NATYHCKKDNCPLMYNPRQYDYDKDDVGDRCDNCPYEHNPAQTDTDNNGEGDACSIDMDG
DEILNERDNCPLIYNTDQKDTDLDGVGDQCDNCPLVHNPQQTDADNDLIGDQCDDNQDID
EDGHQNNMDNCPYIPNANQADHDGDGKGDACDHDDDNDGIPDDRDNCRLVSNKDQTDSDG
DGRGDECENDFDNDKVPDIFDACPENSAISVTDFRKFQMVHLDPKGTTQIDPNWVVRNQG
KELVQTANSDPGIAVGFDEFSAVDFSGTFYVNTDRDDDYAGFVFGYQSSRRFYVVMWKQI
TQTYWEDKPSKAFGISGVSLKVVNSTTGTGENLRNALWHTGNTKQQVRTLWHDPKNIGWK
DYTAYRWHLIHRPKTGFIRVVVYEGKQIMADSGPIYDKTFAGGRLGLFVFSQEAVFFSDL
KYECRGEQI
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgattctccgaagatgtctccgaaacttggcccttttgcttctcttcacctttgtaaaa
tctcaagatgcacatctggaagatgagacagtttttgacctgtttgaaaccagtgggatc
acacgcaagactatcggtgtaaagcttttcaagggtctggacagcgatgctccagcatac
cgcttcatccgttttgaccaggtcccctcggtcagctccacagcggtacaaaaacttctt
ttgcagatacaaaacaacgaaggcttcattctgacagccactctgcgccaggaccgcaca
tcccgtggcaccattcttgcactggaaggccctggagagcgcaggcagtttgaagttgtt
tcggatggaagaaccaacactttagatttggtgtactggtgggctgatggctcacgcaac
gtgatctcttttgaagatgtagacctctcggattcacagtggaaaaatgtaacgcttcat
gtacatggagagacagcaactttgtacattggttgtgcactcattgatagctttattctc
gatgaacctttctatgaacacctgagcgccacaggtgctcgtatgtatgtggccaaaggg
gctacacgagaaagccactttaggggcttgctgcagaatgtacgttttatctttgacacc
ccacttgaggacattctggagagcaggggatgtgatcttggaaacccagaggaggcaaat
gtagtcagcgagagtgcggaggtggtggaggtggaggttccatcttcaattgccaccaat
gtgattggccagaatacagatgttccagcaaccagctcctcagaactaatgtgtgaacgt
tcctgtgaagaactggccaacctcttccaggagctgaagggtctcagagttgttgttagc
aaccttatagatggtctgcagaaagtgacagaagaaaacacggcgatgaaggaggcacta
aataagatgcagagtctttcggagcagactatatgttggcaagatggccgtatgtttgag
gacaaagaggactggattgtggatagctgtactaaatgtacctgccaagaaggaaaagtg
gtttgtcgtcaaatcacttgtcctccagtggcatgtgccaatccatccttcatcgatggc
gaatgctgtccagtttgccttccaatggacagtgaagatggctggtctccatggtcagaa
tggactcagtgcacagtcacatgtggaagtggcactcaacagagggggcgctcttgtgat
gacacaagcaatacatgttctggaccctcgattcagacacgcaagtgcagtttgggaaaa
tgtgaccgcagagtccgtcaggacggtggatggagcttatggtctccatggtcatcctgc
tcagtgacgtgtggagaaggtctgatcacacgtatccgtcactgcaatgctcctgttcca
caaagaggtggaaaagactgtgaaggtgatggacgagagacacaaagctgccgcttggac
ccctgtccgattgatggtggctggggtccatggtctccctgggcaatgtgttcggctaca
tgtggagggggtctgaagagtcgtgttagggaatgtaatagccctgaaccacagcatgga
ggaaggaaatgtcttggagactccactgaaaatgaagtatgcaaccgacaggagtgtcct
gttgatgcctgtctttcgaacccttgcttctccggagttgagtgtatcacagcttctgat
ggatcctgggaatgtggaccctgcccgaatggttatcgtggcaatggaactttctgtgaa
gatgtcaatgagtgcgatatggtatcagatctgtgtcataaggtgggtggcctacagcaa
tgtgtgaatacagaccccggattccactgtctcccctgccccccacgctacaaagggact
cagccctacggcatgggagtggagtcagctaaaatcaacaaacaggtgtgtgaaccctac
aacccctgcaaagacaacagccacagttgccacaagtatgctgaatgcatcttccttagt
cacttcagtgacccaatgtacaagtgcgagtgccgtattggttatgctggagatggcatc
atctgtggagaggactatgatctggatggatggcccaaccaggatcttgtgtgtggagca
aatgccacctaccattgcaaaaaggacaactgccccctgatgtacaaccccaggcagtat
gactatgacaaggatgatgtcggagaccgttgtgataactgcccatatgaacataaccct
gctcagaccgatactgacaacaatggggaaggagatgcctgttctattgatatggatgga
gatgagattctaaacgagcgagacaactgccctctcatttacaacacagaccagaaagac
accgatttagatggtgtcggagaccagtgtgataactgccccttagtccacaacccacag
cagacggatgcagataatgatctaattggagaccaatgtgatgacaaccaagacatagat
gaagatggccatcaaaataacatggataactgcccgtacatacctaatgcaaaccaagcc
gaccacgacggagacgggaaaggagatgcttgtgatcatgatgatgataatgatggcatt
cctgatgaccgggataactgcagactagtttccaacaaggaccaaacggactctgatggt
gatggtcgtggtgatgagtgtgagaatgatttcgacaatgacaaagtcccggatatcttc
gatgcatgcccggaaaacagtgcaatcagcgtcacagatttccggaagtttcaaatggtt
catctcgaccccaagggaaccacacagattgatccaaactgggtggtccgaaaccagggc
aaagagcttgtgcaaactgccaactccgaccctggaattgcagtgggctttgatgagttc
agcgctgtggatttcagcgggaccttctatgtgaatacagacagggatgatgattatgca
ggatttgtgtttggataccagtctagccgacgtttttacgtagtcatgtggaaacagatc
acgcagacgtactgggaagacaagccatcaaaggcgtttggcatctctggcgtctctctc
aaggtggtcaactccaccacaggcactggggaaaatctacgcaatgcattatggcacaca
ggcaacaccaagcagcaggtgcgcactctgtggcacgacccgaagaatatcggctggaaa
gactatactgcctaccgctggcatctcatccacaggccaaagactggattcattagagtt
gttgtgtatgaaggcaagcagatcatggcagactcaggccccatttatgacaaaacgttt
gcaggtggaagactcgggttattcgttttctcccaggaggccgttttcttctctgacctc
aaatatgaatgcagaggtgaacaaatatga
DBGET
integrated database retrieval system