Cyprinus carpio (common carp): 109099321
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Entry
109099321 CDS
T05134
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109099321 (med13a)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
109099321 (med13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
109099321
NCBI-ProteinID:
XP_042588570
Ensembl:
ENSCCRG00000035951
UniProt:
A0A9Q9WS44
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All DBs
Position
B10:complement(13671888..13730976)
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AA seq
2154 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFYLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILCSFSRC
LKADVLSVWRRSQRQGRRELWLFWWGDDPNFSELIHHELTGEDDGVWESGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKREHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYHLNEEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKLSDPPTQKLIEEWNQFY
PISPTSKESTEDKMEDIDWEDDSLAAVEVLVGGVRMVYPACLVLVPQSDIPTVTPTGSSH
CTAVYSNGHQVPASNRDPAISSVTLTPPTSPEEAQTVHSHSAQKWMRLPVAMDGFSVDST
SHHGGKIPRRMASQVVESVWQECNINRAQNKRKFSATVSNGTSEEETLMKVGTWDFVDST
QRSSCNCSRHKTLKQRGSSTPGQPPTAGQTQQPPIKHKAGEKPEKGDKQQKRPQTPFHHR
NSVCEDVSMETDASAGQRLALRGQEGGRFPVLRPSDVSTCSKPPQLHSGGGATVSNSGPT
EMVGSPQPPPLSPHPCERGEEASDAIKNPSTPHSQHFYPPSAEPCLLPQKGPDDARLEPL
TQPFPPAYPEPLEPTPYVSAAVNLDDDGSHVPWRFFNLPRRKDAEFPTPSLPGDKLREEA
SLGAEGIMSVTELMVASKRPLKVSDERIQMYLQRQNQHLAAAITDGDHEPEVDPYAFVDG
DVKFTFSDKKDKAGGDREPGKKHKGEDGNAALSDEAQRAAAHNRAASTSLIHDSDLAVSF
KDLDNLFNSDEDEQTPGARRAVNGADEKFGSKESKPATMDSVPFISAADLHQMFPTPPSL
EQHNMGYSPMNKEYGCMEPGSGLNTLDGSIALGGQFKIEVEESFCSPKPSEIKDFSFVYK
PELCQPFVGCSMFAPLKSLPSQCLPPIKLPDECVYTPSWTVGKLELLNSVPAMTIFSKDG
DNNAMEQEYIQTYTPQTHTPFLSNSAPPSNSGTSILPSPATPRFSAPTPRTPRTPRTPRG
PASVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESVMNLFK
DCNFDSCCICACNMNIKGADVGIYISDPNMEAQYPCGCGFSAVVNRRYGNGSGLFLEDEL
DIIGRGSDVSQEAEKRFEAIRSTSLEKTGGGGKDRVPDELISVLQDQCTNPFSPMLPMDP
EGLSSQGPGGATVPPCVRVEERDFHNDCYLALEHGRQFMDNMSGGKVDETLVKSTCLHHW
AKHSAVDVSGLCSQDVLRVLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKMAGRGSY
GTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPFGSQRDVGYLVLCPDSDGLL
SGAKTFFRELTAVYESCKLGQHRPISKVHADGIVRVGGAAAKKLSEQPVSDWFLKAASGS
SDAFAKLKLFAQVCRHDLAPYLATQSLDSSLLIQPTPVPSSTQSSSLQSSGSASSNSQTS
MASGGSALNNNNAASNSGSGLPDNTSNTPSSSGPQGSSIQSAKPSSFPPFGSMGVQGNSS
QSGALGQQAVTQNSSLSGDNSTVNSQTQGPSEPPESTMEREKVGVPTDGDSHAITYPPAI
MIYIVDPFSYEEAEPGVSQSSMWTLGLLRCYLEMLQALPAHIRNSVFVQIVPCQYLLQPV
RSEERYLYAQHLKSLAFSVFTQCKRPLPTSTNVKSLTGFGPGLALDTSLRNPDRPECLRL
YTPPFILAPTKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLATCTDLYGELLETCI
ISIDVPNRARRKKGSARKLGLQKLWDWCLGLVQMTSLPWRVVIGRLGRIGHGELRDWSIL
LSKRNLQSVSRRLKENCKLCGISAADTPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRS
TTLNMQTSQLSTPQDTSCTHILVFPTSAFVQVNSSNYPHENIDIAFNPGNDGSDPMGNIF
YLLEQENDLVDPDIINILPASPTTSPVHSPGSQYPHGGDGSKGQSTDRMESHEEAPNILQ
QPLALGYFVSTVKAGPLPDWFWSSCPQAQNQCPLFLKASLHLHVSSVQSDELLHSKHSHP
LDSSQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQMYNFIMTML
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgtttcgtaccgaacggggccagcttggaggactgccattccaatctattc
tatctggctgatttgacagggataaaatggaagaggtatgtgtggcaaggtccgacctcg
gcgcccatcctgttcccagtcaccgaggaggaccccatcctctgcagcttcagccgttgt
ctgaaggcggatgtgctgagcgtgtggaggcggagccagaggcagggacgccgggagctc
tggctcttctggtggggcgacgatcccaacttctctgagctcatccaccacgaactgaca
ggcgaggatgacggtgtgtgggaaagcggtctgtcctacgaatgtcgaactcttctcttc
aaggccattcacaacctgctggagcgctgtctgatgaaccgtagttttgtgcgcatcgga
aaatggtttgtcaaaccctatgaaaaggacgagaagcccattaacaagagagaacacctg
tcttgctctttcacgttcttcctgcatggagacagtaatgtgtgcaccagcgtggagatc
aaccagcaccagcccgtgtaccacctgaacgaggagcacctgacactggcccagcaggcc
tccagcccattccaagtgattctgagtccatttggactgaacgggacattgaccggtcag
tccttcaagctgtccgaccctccgacacagaagctcattgaagaatggaatcagttctat
cccatcagcccgacctccaaggagagcacagaggacaaaatggaggacatcgactgggag
gacgactccctggcagcagtggaagtgcttgttggtggtgtgcgcatggtgtatcctgca
tgcctggtgttagtcccgcagtcagacatccccactgtaacacctacggggtcctcgcac
tgcaccgctgtctattcaaatggccatcaagtgcctgcttcaaaccgtgaccccgccatc
tcttcagtgaccctgactcctcccacctcacctgaggaggctcagacagttcactctcac
tcagcacagaagtggatgcggttgccggtggcgatggatggattcagtgttgacagcacc
agtcatcacggtggcaagattccacgcaggatggcaagtcaggtggttgagagcgtttgg
caggagtgcaacatcaaccgagctcagaacaaacggaaattctctgccacagtctccaat
gggaccagcgaggaggagacgctgatgaaagtgggcacctgggactttgtcgactccaca
cagagatcaagctgcaactgttcgaggcacaaaaccctgaagcaaagaggaagcagcacg
cctggtcagccgcccaccgccggtcagacgcagcagccgcccatcaagcacaaagctggg
gagaagcccgaaaaaggtgacaagcagcagaaacgcccgcagacgcccttccaccatcgc
aactcagtctgtgaagatgtctcaatggaaaccgatgcttctgcgggtcagcgcttggct
cttagaggccaagagggtggacggtttcctgtgcttcgcccatctgatgtgagcacttgc
tcaaaacctccacaactgcacagcgggggcggagctaccgtgagcaacagtggcccgaca
gagatggtcggctctcctcagccaccgccgctgagccctcacccttgcgaacgtggcgag
gaagcctcagacgccattaaaaacccctccacaccacacagccaacatttttaccctcct
tccgcagagccatgcctcctgccccaaaagggcccagatgatgcccgtttggagcccctc
actcaaccttttccccctgcgtaccccgagcccctggagcccacgccgtatgtcagtgca
gcagtaaacctggatgacgacgggagtcacgtgccgtggagattcttcaacctgccccgt
aggaaagatgcagagtttcccacgccgtcactaccaggagacaaactccgagaagaggca
tcactcggagctgaagggattatgtctgttactgagttaatggttgcctccaaaaggcca
ctcaaggtctcagatgaacggatccagatgtacctgcagcgacagaaccagcacctggct
gcagccatcacagacggcgaccacgagcctgaggtcgacccctacgcttttgttgacgga
gatgttaagttcacattctcggataagaaagacaaagctgggggagatagagaaccaggg
aagaaacacaagggagaagatggcaatgctgctctatcagatgaagctcagcgggctgcg
gcccataaccgggctgcttccaccagcctcatacatgattcagacctggcagtctccttc
aaagacctggacaacctcttcaactcagatgaggatgaacaaacacctggagcacggaga
gctgtaaatggagcagatgagaagtttggcagcaaggagtcgaaaccagccacaatggac
tctgtcccctttataagcgcggctgatctacaccagatgttccctacgcctccatcttta
gagcagcacaacatgggttactctcccatgaataaagagtatggctgtatggagcctggc
tctggcctcaacactctagatggttctattgctctgggtggtcagtttaaaatcgaggtg
gaggagagtttctgcagccccaaaccttctgaaatcaaggacttctcatttgtgtacaag
cctgagttgtgtcagccatttgtgggctgttccatgtttgcccccctgaagtctttgccc
agtcagtgcctgccccctatcaaactgcctgatgagtgtgtttacacacccagctggaca
gtgggaaaactggagctactcaactctgtacctgctatgaccattttcagcaaggatggt
gataacaatgctatggaacaagagtatatccagacgtacacccctcagacccacacacca
ttcttgtctaacagcgctccgcccagcaacagcggcacgagcatcctcccttcccctgcc
acgcctcgcttctcagctcccacccctcgtaccccacggacaccccggacccccagaggc
ccagccagtgtgcaaggttccctcaaatatgagaactcggacttgtactcaccggcctcg
acgccctccacctgcaggccgctcaactctgtggagcctgcgacggttccctccatcccc
gaagcccacagcctatacgtcaacctcatcctgtcggagtctgtcatgaacctgttcaag
gactgcaacttcgacagctgctgcatctgcgcatgcaacatgaacatcaaaggcgccgac
gtgggcatctacatcagtgaccccaacatggaggcccagtatccctgcgggtgcggcttc
agtgctgtcgtcaaccggcgctacggtaatggctccggcctcttcctggaagatgagctg
gatatcatcggacggggatcggacgtgagccaggaggcggagaaacgctttgaggcgata
cggagcacgtcgctggagaagacagggggtggaggcaaggatcgagtcccggacgagctt
atctctgtcctgcaggatcagtgcactaatcccttctcccctatgctgccgatggaccca
gagggactgtcttcccaagggccagggggtgccactgtaccaccatgtgtgcgtgtggag
gaaagggacttccacaatgactgttacctggctctagaacacgggcggcagttcatggat
aacatgtctggtgggaaggtggacgagacgctggtgaagagcacctgtttgcaccattgg
gctaaacacagcgcagtggatgtgagcgggctgtgctctcaggatgtgttgagagttctc
ctctctcttcagcctgttcttcaggatgccatccagaagaagaggactgttcgctcatgg
ggtgtccaggggcctctcacatggcagcagtttcacaagatggctggaagagggtcttat
ggcactgatgagtctccggagccgctgcccattcctaccttcttggttgggtatgagtat
gactttgtggtgctgtctcccttcggcctgccctactgggagaagctactgttggatccc
tttggctcccagagagacgtgggctatctggtcctctgcccggacagcgatggtctcctc
tctggagccaagaccttctttagagagttgacagcggtctacgagtcttgtaagctcggt
cagcatcgaccaatctccaaagtgcatgctgatggcattgttagggtgggtggagcagct
gccaagaagctctcagaacagccagtcagtgattggttcctgaaagcagctagtggcagc
agtgatgcatttgccaagctcaaactgtttgcccaagtctgcagacatgacctcgctcca
tacctcgctacacagtcattggacagctctcttctcattcagccaacccctgtcccttct
tccacccaatcatcttccttgcaatcatcaggctccgcctcctccaactctcaaacctca
atggcctccggaggctccgccctcaacaacaacaatgctgccagcaacagtggttcaggc
ctgccagacaacaccagtaacaccccctcctcctcaggccctcagggcagcagcatccag
tctgccaagcccagctcgttccctccctttggaagcatgggtgtccaaggtaacagctcc
cagtctggggctctgggccagcaggctgtcacccagaactcaagcctctccggagacaat
tcaaccgtcaacagccagactcaggggccatctgaacctccagagagcactatggagaga
gaaaaggttggagttcctacagatggagattcccatgccatcacgtacccacctgccatc
atgatctatattgtggaccccttctcatatgaggaggcggagccaggggtgtcacaatca
agcatgtggacgctgggactcctccgctgctacctggagatgctgcaggcccttccagct
cacatccgcaactctgtgtttgtacagatcgtcccctgtcagtacttgctccagcctgtg
aggagtgaagagaggtacctctacgcccagcacctcaagtctcttgccttctccgtcttc
acccagtgcaaaagacccctcccaacctccaccaatgtgaaatcactgacgggtttcggc
cccggcctcgccctcgacacttccctcaggaacccagatagaccggagtgtctgcgattg
tacacgccacccttcatcctggccccaacgaaagacaagcaaacggagctgggtgagacc
ttcggagaggcgtctcagaagtataatgtcctgtttgtgggctactgcctgtcacatgat
caaagatggctgttggccacctgtacggacctgtacggagagctgctggaaacctgtatc
atcagcatagacgtacccaacagagcaagaaggaaaaaggggtctgcccggaagctgggc
ctacaaaagctttgggactggtgtctaggtttggttcagatgacatcattgccatggaga
gtggtgattggccggcttggacgaatagggcatggagagttgcgagactggagtatttta
ctgagcaaacggaatcttcagtcagtgtctcggaggctgaaggagaactgtaagctgtgc
gggatctcagcagctgatactcccagcatccttagcgcctgcctggttgccatggaaccc
cagggctcatttgtcatcatgccagactctgtgtcaacaggctctgtgtttggtcgaagt
acaactctaaacatgcagacgtcccagctgagcaccccgcaggacacgtcttgcacacac
atcctggtgttccccacctctgcttttgtgcaagtcaacagctccaactacccacatgag
aacattgacattgccttcaaccctggcaatgatggatcagatccaatgggaaacatcttt
taccttctggagcaggagaatgacctggttgatcctgacatcataaatatccttcctgcc
tcacccacaacgtcaccagtccactcacctggatcccagtatccccacggaggagatggg
agcaagggtcaaagtacagaccgcatggagtctcatgaagaagctcctaatatcctgcag
cagccattagctctgggctattttgtgtccacggttaaagcaggtccactgcctgactgg
ttctggtcctcgtgtcctcaggcacagaaccagtgtccccttttcttaaaggcctctcta
cacctccatgtgtcttcagtgcagtcggatgaacttttgcacagcaaacactctcaccct
ctggactccagtcagacctctgatgttctcagatttgtgttggagcagtacaacgccctt
tcctggctgacctgtgaccctgcgacccaggaccgccgctcttgcctgcccatccatttt
gtagtgctcaatcaaatgtacaacttcattatgaccatgttgtaa
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