Cyprinus carpio (common carp): 109099336
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Entry
109099336 CDS
T05134
Name
(RefSeq) thyroid receptor-interacting protein 11-like
KO
K23368
thyroid receptor-interacting protein 11
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109099336
Membrane trafficking [BR:
ccar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
109099336
Retrieval pathways
109099336
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
CEP162_C
CCDC39
IPGAL2_N
YabA
SlyX
Motif
Other DBs
NCBI-GeneID:
109099336
NCBI-ProteinID:
XP_042625140
Ensembl:
ENSCCRG00000002406
UniProt:
A0A8C1J266
LinkDB
All DBs
Position
A13:complement(19017212..19035062)
Genome browser
AA seq
1977 aa
AA seq
DB search
MSSWLGGLGSGLGQSLGQVGGSLSSFTGQISNFTKDILLESAEEVGDGASELQVSSPRLQ
ELETLYAAQKSEYERLRRINSELEEKLEAAEIQVKQQSVEYRTLLQQKEVEISHLKARQS
GLQEEVQKLQHSVQAAASSSSTDSAAVLPVTTAANTTTSSSFLHRSSAVHQGIHGDEVDL
SDVLWSQQEINRLSSEVHRLEADVAHWRRVAQASKLPGVDGNGEVVKMHRMIKELREEMA
REVDEHQHELAALQDAQRLKMAEISKRHREELAEYEERIEELEEQLQSEGGNVAQKSSTV
QDSAKLQELHSTIQSLQEEAELHRKQHRDLLASLEEAEHQKTKLEREKEEATAENTELLQ
NYSRLQKSVNELQARVQEQEGKSVLKAQHDDEIQTLKKALAGAEKEMARLRTLSESSPTE
EVEHADILELNTIIDTLREEKEEVEREKLALVERLTLAEERHKGFESESAVELSQEVSDL
KSQLQQRERALKQAHLDIETLSAELEELDRQNQEATQHLIAVKEQLSLQKTQADAEKAHL
QSDLNSSLDQRRTLQLELEAQGEKLSQSAFSLNELHMAKQQLETTVKELREKLCKSQDLG
KELRQESSELKRALQERESELTALCEKLTHSGEQGNESEEHRKVLEARDEEIRDLRTELA
EVKASYERAITEDFELKIENRKLKEECTQALGKIDSLERQIQDGQASLSRMSLEKDTRIE
ALKLEKSQLESELSRTEKRLSDQAKQYQQTIDELTRARSMDASALQTEHERMVKLNQEKD
LSIAELRREMEQMVSDHKDTSEMLDITVAGQNQLTELLQEKDAFAETLRAQAAETQQELE
RKFLGATQECDSLRRSVEEKDKQLGVMKEKNSHLKEEIDRLRDQQSRPQLLSEPRTLDII
TELETEVAQLKASRDQLEKEVQSLRKVSEEQQVTQHSLQVLQSELEQARTRHEQSSLSYE
RLISAKDEEIVQLQSEVEGLSTQGQSHIQSVEILQEDKTQSLNGENGNEKHDLSKVEIEK
LVKGISEKETEINQLNEKNLSLTKQLDQLVVSQNELGKLSQMVLQKDLEIQALHARVAGG
HGQDVVFLQQQLQAYAVEREQVLAVLNEKTRENSQLRSDYHRIMDIVASKEAALLKLQQE
NQRLSTMSDPSGSQEMFRETIQNLSRIIREKDIEIDALTQKCQTLVTVLQASGAGDSVSG
GSGGVSSNQFEELLQERDSLKQQVKKMEEWKQQVITTVRNMQHESAQLQEELLKLQGQVS
ADSDCSSQLSVDYTRLIHSYEQKEKRLGFLSQELAQVQQTISQLSSTKDVLLGKLGSVKH
SPEASATHAFAPPNLKGAAPPGQDESLHQELQSMQRILAEKESMIRILQENNHRLSNSAS
LSESDQRSHAEELKQAREKQESLQRSLREKDLLIKTKGDQLSQVSENLRNRENDSEVLKQ
AVTNLKERALILELDVKKLKEENEAIAAKAREKETEFRALQETNMQVSLLLREREFQFSA
VNEKAAAIEKMLKDKEQGKSGELNQLLNEVKSMQEKAVLFQQERDQVMMALKQKQMETTA
LQSELQHTRDKEQRLKQEVERLRNHLLEIEDSYTREALAAEDREGELRRRVALLEERLAS
SSNAVESASQQASLQVESLQEQLNGAVRQRDEALIQLRASQDQVNQYAVSLSNLQMVLEQ
FQQEEKAMYSAELEKHKREKEEWRNKAENLQDQAAALQINLDEANAALESASRLTDQLDL
KEEQIEDLKKQVDLRQEMLEEAQRKLMNLLNSTEGKVDKVLMKNLYLGYFHTPRNKRSEV
LRLMGNVLGLDRDEVTELLQEEGKSGMTGWVSSWLGGRAVQSVPNTPQRPTHTQNLNSSF
SEMFVKFLEVESTPALPAPKLPVYDIKPLSAPPPGRSTANTPASGVLGPGKRTGDSNPFL
APRSAAVPLLNPSAGSTAGSGGHLLMKPISDALPTFTPLPVSAEASSGAVLKDLLKQ
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctggctgggagggttaggctctggcctgggacagagtttgggtcaggtcggg
ggaagcttgtcttcttttaccggccagatctctaattttaccaaagatattctactggaa
agcgccgaggaagtgggagatggtgcctctgagctgcaagtgtccagccctagattgcag
gaactggagactttatatgcagctcaaaaatccgagtatgagcgcttgcggagaataaac
tctgagttggaggagaagctagaggcggcagagattcaggtcaaacagcagtcagtggaa
tacagaaccctcctgcaacagaaagaggtggagatcagtcacctcaaggcccgtcagagt
ggtctgcaggaagaggttcagaaactccaacattccgttcaggctgcagccagctcatcc
tccaccgattctgctgctgtacttcctgttaccactgctgccaatactactacttcgtct
tcctttctgcaccggtcttcagctgtccatcaaggcatccatggcgatgaggtggacctc
agtgatgtcctgtggtcacagcaggaaattaaccgtctttccagtgaggtgcatcgtcta
gaagctgatgtagcccactggaggagagttgcacaggcatccaagctaccaggagttgat
ggtaacggtgaagttgtgaaaatgcacagaatgatcaaggagctgagagaggaaatggca
cgggaggtggatgagcaccagcatgaactggcagcattgcaggatgcccagaggctgaaa
atggctgaaatctcaaaacggcacagagaggagctggcagagtatgaggagaggattgag
gagcttgaggagcagcttcaaagtgaaggtggaaatgttgcccaaaaatcaagcacagta
caggactctgccaaacttcaagaattgcattcgaccatacagtctttacaggaggaggct
gagcttcatcgcaagcagcacagagatctattggccagcttggaggaggcagagcatcag
aagaccaagctagaaagggaaaaggaggaggctacagcagaaaatacagaattgttgcag
aattacagtcgccttcagaagtctgtaaacgaactccaggctcgagtacaggaacaggag
gggaagtctgtgctgaaagcccagcatgacgatgagatacaaaccctgaaaaaagctctg
gcaggtgcagagaaagagatggctagattgaggactctcagtgagagcagtcctacagaa
gaagtagaacatgctgacatcctggagctcaacaccatcattgataccctcagggaagag
aaggaagaggtggagagagaaaagcttgcattagttgagagactgactctggccgaggag
agacacaagggtttcgagtcagaaagtgctgtggaactatcacaggaagtttcagactta
aagagccagctacaacaacgggagcgagcactaaagcaagcacatcttgatatagagaca
ctcagtgctgaactggaagaactggacaggcagaaccaggaagccacacagcatcttatt
gcagtgaaggaacagctgtccttgcagaaaactcaggctgatgcagaaaaagcccatctt
cagtcagatctcaactcttctcttgaccagagacggactcttcaattggaactggaagct
cagggggagaagctaagtcaaagtgccttctccttgaatgaactgcacatggcaaagcag
caactggaaaccacggtaaaggagttgagagaaaagttgtgcaagtcacaggatctgggc
aaagagctgcggcaggagtcctctgaactcaagagggcgcttcaggagagagaatccgaa
cttactgccctttgtgagaagttaactcattctggggagcaagggaatgagtcggaggaa
cacaggaaggtacttgaggcaagggatgaagagatccgggacttgagaacagagttagca
gaagtaaaggcctcctacgagagggccattacagaggactttgaattaaaaattgaaaac
aggaagttaaaagaagagtgcactcaggctttggggaagattgacagtttggaaaggcag
atccaagatggtcaagcctctctaagcaggatgtccctggagaaagatacccgcattgaa
gccttgaaattagagaagagccagttagaatctgagctaagtaggactgagaaacgacta
tcagatcaggccaaacagtatcaacaaaccattgacgaactgaccagagcacgctctatg
gatgcttctgcactgcagacagaacacgagcgaatggtgaagctgaatcaggaaaaagat
ctctcaattgcagagctcaggcgtgagatggagcaaatggtctctgaccacaaagacacc
agtgagatgctggacatcactgtggcaggccaaaatcaactcaccgagcttctgcaggaa
aaggacgcatttgccgaaaccctaagagctcaagctgcagaaacacaacaggaattagag
cgcaagttcttgggagcaactcaggaatgtgactctctgagaaggtcagtggaggagaag
gacaaacagcttggagtcatgaaggaaaaaaacagccatctaaaagaagagattgaccgt
cttagggaccagcaaagtagaccacagttattgtcagagccacggacactagacatcatc
acagagcttgagactgaggtggcccagctcaaagcttccagagatcagctcgaaaaagag
gtccaatctttgcggaaggtttcagaggagcagcaggtcacacagcattctcttcaggtg
ctacagagtgaactagagcaagcacggacaagacatgaacaaagctcactcagttatgaa
agactcatcagtgctaaagatgaggagattgtccagcttcagtcagaagtggaaggcctg
agcacacaaggacagagtcatatacagtccgtagaaatcctacaggaagacaagacccag
tcactgaatggtgaaaacggtaatgagaaacatgacctttctaaggttgagattgagaaa
cttgtgaaaggaatcagtgagaaagagactgagattaaccagctaaatgagaagaacctg
tctctaaccaaacagctcgatcaacttgtggtctctcagaatgaactgggaaagctctcg
cagatggtgcttcaaaaagatctagaaatccaggcgctccatgctcgtgtggctggtgga
cacggtcaagatgtggttttcctgcagcagcagttgcaggcatatgcagtggaacgtgaa
caggtgttggccgtgctcaacgagaaaaccagagaaaacagccagctgcgttcagactac
catcgcattatggacattgttgcatccaaggaagccgccttgttgaagctccagcaagaa
aaccagcggctctccactatgagcgacccttcaggcagtcaagagatgtttcgagagacc
attcagaacctttcgcgcatcattcgtgagaaggatattgagattgacgctttgactcag
aaatgtcagaccctggtcactgtcctccaggcatctggtgctggcgattccgttagtggt
ggctcagggggtgttagcagtaaccagtttgaggagctcctacaagaacgtgacagtctc
aaacagcaagtgaagaagatggaggagtggaagcagcaggtgatcacgactgtgaggaac
atgcagcatgaatctgctcagctccaagaggagctgctcaagctgcaggggcaggtttct
gcagatagcgactgcagctcacagctctcggtggattacaccagacttattcatagctat
gagcagaaagagaaaagactgggatttttgagtcaagagctggcacaggtgcagcagacc
atcagccaactgagcagtaccaaagacgtcctgcttgggaagcttggcagtgtcaagcac
tctccagaagcttctgctacccatgcttttgcccctccaaacctgaagggggcagcacca
cctggtcaagatgagagcctacatcaggagttgcagtcaatgcagagaattttagcagag
aaggagagcatgataagaattctccaagaaaacaatcatcgcttgtcaaattctgcatct
ctgtcagaaagtgatcagagaagccatgcagaggagctcaagcaggcccgagagaagcaa
gaatcgctacagcgctccctcagagagaaagatctgctcattaagaccaagggagaccaa
ctcagtcaggtgagtgaaaatttacgtaatcgcgaaaacgacagtgaggtcttgaagcag
gctgtgacaaacctgaaggagcgtgcgctgatcctggaactcgatgtgaagaagctaaaa
gaggagaatgaagcgatagcagcaaaagctcgtgagaaagagacagagttccgtgccctt
caggagaccaacatgcaggtgtcactgctgcttcgggaacgagagtttcagttcagtgct
gtgaatgagaaggctgctgccattgagaagatgctaaaagataaagagcagggtaaatct
ggtgagctgaaccaattgttgaatgaagttaagtccatgcaggagaaggcagtgttgttt
cagcaagaaagagatcaagtgatgatggctctcaaacaaaaacaaatggagacaaccgct
cttcagagtgagctgcaacacacacgcgataaagagcagcgtctgaagcaggaggtggag
cgtttgcgcaatcacctgttagagattgaggattcgtacacacgtgaggctttggcagct
gaggacagagagggagagctgagacgcagagtggcactcctggaggagcggttagcatct
tcctccaatgctgtggagagcgcaagtcagcaggctagcctgcaggtcgagtctcttcag
gagcagctgaatggtgctgtcagacagcgagatgaagctcttattcagctccgtgcttcg
caggatcaggtcaaccagtatgcagtgtcactctctaacctgcagatggtgctagaacag
tttcaacaagaagaaaaggccatgtactcagcagaactggaaaaacacaagagagaaaaa
gaagagtggagaaataaagcagaaaatctccaggatcaggcggctgctctgcaaataaac
ctggatgaagcaaacgcagctctagaatctgcctcccgcctcactgaccagctggacctc
aaagaggaacagatagaagatctgaagaaacaagtggatttgagacaggagatgttggaa
gaggctcagagaaaactgatgaacctcctgaacagcaccgaaggcaaagtggacaaggtt
ctgatgaagaatctttacctgggctattttcataccccccgaaacaagcgttctgaggtg
ctgaggcttatgggtaatgtgcttgggttggaccgagatgaggtgaccgagttgttacag
gaagagggaaagagtgggatgaccggatgggtctcgagttggctgggaggcagagctgtt
cagagtgtacccaacactccccaaaggcctacacatacacagaacctcaattcgtccttc
tctgagatgtttgtgaagttcctggaggtggagtctactcctgctcttcctgcccctaaa
ttgcctgtttatgacatcaagcctctgagtgcgcccccacctggccggagtacagcaaac
acacctgcatcaggtgttttaggcccaggtaagcgcaccggggattcaaaccccttcctg
gcaccccggtctgcagccgtacccctcctcaatcccagtgcaggcagcactgcaggttct
gggggccacctgcttatgaagcccatctcagatgccctgcctacctttacacctctacca
gtgtcggctgaagcgagcagtggggctgtgctgaaagatttgctcaagcagtga
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integrated database retrieval system
